RNA–Protein interactions for RNA: ENST00000639489.1

KCNMA1-262, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-262ENST00000639489 CRAMP1Q96RY5 1269 aa16.16■□□□□ 0.18
KCNMA1-262ENST00000639489 RNF146Q9NTX7 359 aa16.16■□□□□ 0.18
KCNMA1-262ENST00000639489 MYO3BQ8WXR4 1341 aa16.16■□□□□ 0.18
KCNMA1-262ENST00000639489 MAPK4P31152 587 aa16.16■□□□□ 0.18
KCNMA1-262ENST00000639489 PADI6Q6TGC4 694 aa16.16■□□□□ 0.18
KCNMA1-262ENST00000639489 HPS5Q9UPZ3 1129 aa16.16■□□□□ 0.18
KCNMA1-262ENST00000639489 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.16■□□□□ 0.18
KCNMA1-262ENST00000639489 MAP2P11137 1827 aaKnown RBP16.16■□□□□ 0.18
KCNMA1-262ENST00000639489 PVALEFA0A1B0GWK0 134 aa16.16■□□□□ 0.18
KCNMA1-262ENST00000639489 RASA1P20936 1047 aa16.16■□□□□ 0.18
KCNMA1-262ENST00000639489 GNGT1P63211 74 aa16.16■□□□□ 0.18
KCNMA1-262ENST00000639489 ITIH3Q06033 890 aa16.16■□□□□ 0.18
KCNMA1-262ENST00000639489 FAM149B1Q96BN6 582 aa16.16■□□□□ 0.18
KCNMA1-262ENST00000639489 PHF20Q9BVI0 1012 aa16.16■□□□□ 0.18
KCNMA1-262ENST00000639489 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.16■□□□□ 0.18
KCNMA1-262ENST00000639489 PARP2Q9UGN5 583 aa16.16■□□□□ 0.18
KCNMA1-262ENST00000639489 IPO5O00410 1097 aaKnown RBP16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 PSAPP07602 524 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 TFDP1Q14186 410 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 SBK1Q52WX2 424 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 TTC19Q6DKK2 380 aaPredicted RBP16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 PRPF38AQ8NAV1 312 aaKnown RBP16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 MED10Q9BTT4 135 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 KCNH2Q12809 1159 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 ZSCAN26Q16670 478 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 SPZ1Q9BXG8 430 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 NR3C1P04150 777 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 GCLMP48507 274 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 MRPS9P82933 396 aaKnown RBP16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 SLC7A5Q01650 507 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 GRIN1Q05586 938 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 BFSP1Q12934 665 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 SNX1Q13596 522 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 VSIG1Q86XK7 387 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 C7orf31Q8N865 590 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 RGL1Q9NZL6 768 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 LRRC53A6NM62 1247 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 BUB1BO60566 1050 aaPredicted RBP16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 INPP5BP32019 993 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 ZNF543Q08ER8 600 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 IQCB1Q15051 598 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 GEN1Q17RS7 908 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 CROCCP2Q86T23 111 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 THNSL1Q8IYQ7 743 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 NUB1Q9Y5A7 615 aa16.15■□□□□ 0.18
KCNMA1-262ENST00000639489 FRMPD1Q5SYB0 1578 aa16.14■□□□□ 0.18
KCNMA1-262ENST00000639489 SRGAP2O75044 1071 aa16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 NDUFB10O96000 172 aa16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 ABL1P00519 1130 aa16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 IREB2P48200 963 aaKnown RBP16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 PPP4R3CPQ6ZMV5 832 aa16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 TXNRD3Q86VQ6 643 aa16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 SLC17A8Q8NDX2 589 aa16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 BPIFA3Q9BQP9 254 aa16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 PGRMC1O00264 195 aaKnown RBP16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 PRELPP51888 382 aa16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 PLTPP55058 493 aa16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 ZNF394Q53GI3 561 aa16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 CDC42EP5Q6NZY7 148 aa16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 PALM2Q8IXS6 379 aa16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 GPATCH11Q8N954 259 aa16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 BCAS4Q8TDM0 211 aa16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 RIOK1Q9BRS2 568 aaKnown RBP16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 FMR1Q06787 632 aaKnown RBP eCLIP16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 MTF1Q14872 753 aa16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 FBXO38Q6PIJ6 1188 aa16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 CCDC117Q8IWD4 279 aaPredicted RBP16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 ZNF668Q96K58 619 aaPredicted RBP16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 JPH2Q9BR39 696 aaPredicted RBP16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 TRIM9Q9C026 710 aa16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 DAAM1Q9Y4D1 1078 aa16.14■□□□□ 0.17
KCNMA1-262ENST00000639489 CLCN6P51797 869 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 SCARA5Q6ZMJ2 495 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 BARGINQ6ZT62 677 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 SALL3Q9BXA9 1300 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 CCDC151A5D8V7 595 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 SLC16A4O15374 487 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 OSBPP22059 807 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 TROAPQ12815 778 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 PNMA8AQ86V59 439 aaPredicted RBP16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 CCDC125Q86Z20 511 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 SLC10A4Q96EP9 437 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 AP1M1Q9BXS5 423 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 USP32Q8NFA0 1604 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 A6NNZ2 444 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 WDR64B1ANS9 1081 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 STX2P32856 288 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 TUBB8Q3ZCM7 444 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 STRIP1Q5VSL9 837 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 PODXL2Q9NZ53 605 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 HERC5Q9UII4 1024 aaKnown RBP16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 DNAJC12Q9UKB3 198 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 ZNF233A6NK53 670 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 PPP2R5CQ13362 524 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 ARMC9Q7Z3E5 817 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 LDHDQ86WU2 507 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 GUF1Q8N442 669 aaKnown RBP16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 CCDC110Q8TBZ0 833 aa16.13■□□□□ 0.17
KCNMA1-262ENST00000639489 FEM1BQ9UK73 627 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms