RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 FBXL19Q6PCT2 694 aa2.18□□□□□ -2.06
LMBR1-222ENST00000638959 USP30Q70CQ3 517 aa2.18□□□□□ -2.06
LMBR1-222ENST00000638959 LRP10Q7Z4F1 713 aa2.18□□□□□ -2.06
LMBR1-222ENST00000638959 ADAT2Q7Z6V5 191 aaKnown RBP2.18□□□□□ -2.06
LMBR1-222ENST00000638959 Q8N1Y9 231 aa2.18□□□□□ -2.06
LMBR1-222ENST00000638959 SHCBP1Q8NEM2 672 aa2.18□□□□□ -2.06
LMBR1-222ENST00000638959 SUPT20HQ8NEM7 779 aa2.18□□□□□ -2.06
LMBR1-222ENST00000638959 THAP3Q8WTV1 239 aaPredicted RBP2.18□□□□□ -2.06
LMBR1-222ENST00000638959 ANKS1AQ92625 1134 aa2.18□□□□□ -2.06
LMBR1-222ENST00000638959 ASB16Q96NS5 453 aa2.18□□□□□ -2.06
LMBR1-222ENST00000638959 MPHOSPH9Q99550 1183 aa2.18□□□□□ -2.06
LMBR1-222ENST00000638959 RSRP1Q9BUV0 290 aa2.18□□□□□ -2.06
LMBR1-222ENST00000638959 GBP3Q9H0R5 595 aa2.18□□□□□ -2.06
LMBR1-222ENST00000638959 GPRC5CQ9NQ84 441 aa2.18□□□□□ -2.06
LMBR1-222ENST00000638959 RNF19AQ9NV58 838 aa2.18□□□□□ -2.06
LMBR1-222ENST00000638959 TIMELESSQ9UNS1 1208 aa2.18□□□□□ -2.06
LMBR1-222ENST00000638959 SUPT16HQ9Y5B9 1047 aaKnown RBP2.18□□□□□ -2.06
LMBR1-222ENST00000638959 TIMM13Q9Y5L4 95 aaPredicted RBP2.18□□□□□ -2.06
LMBR1-222ENST00000638959 PPFIA4O75335 1185 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 IL18BPO95998 194 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 HMGCRP04035 888 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 CCKBRP32239 447 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 BCL6P41182 706 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 ETV4P43268 484 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 ZNF165P49910 485 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 USP14P54578 494 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 GRIN1Q05586 938 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 GRB10Q13322 594 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 RUSC1-AS1Q66K80 236 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 Q6YL49 198 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 ZBTB8BQ8NAP8 495 aaPredicted RBP2.17□□□□□ -2.06
LMBR1-222ENST00000638959 PHOSPHO1Q8TCT1 267 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 MICAL1Q8TDZ2 1067 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 ZBTB9Q96C00 473 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 MIEF2Q96C03 454 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 HAUS7Q99871 368 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 FZD1Q9UP38 647 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 SH3BP1Q9Y3L3 701 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 USP31Q70CQ4 1352 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 COL4A3Q01955 1670 aa2.17□□□□□ -2.06
LMBR1-222ENST00000638959 COL11A2P13942 1736 aaPredicted RBP2.17□□□□□ -2.06
LMBR1-222ENST00000638959 MYO1BO43795 1136 aa2.16□□□□□ -2.06
LMBR1-222ENST00000638959 MAFKO60675 156 aa2.16□□□□□ -2.06
LMBR1-222ENST00000638959 PPM1BO75688 479 aa2.16□□□□□ -2.06
LMBR1-222ENST00000638959 GTF2A2P52657 109 aa2.16□□□□□ -2.06
LMBR1-222ENST00000638959 PFKPQ01813 784 aa2.16□□□□□ -2.06
LMBR1-222ENST00000638959 RABL3Q5HYI8 236 aa2.16□□□□□ -2.06
LMBR1-222ENST00000638959 OR14K1Q8NGZ2 314 aa2.16□□□□□ -2.06
LMBR1-222ENST00000638959 TTLL11Q8NHH1 800 aa2.16□□□□□ -2.06
LMBR1-222ENST00000638959 DUSP9Q99956 384 aaKnown RBP2.16□□□□□ -2.06
LMBR1-222ENST00000638959 LRFN3Q9BTN0 628 aa2.16□□□□□ -2.06
LMBR1-222ENST00000638959 GPR87Q9BY21 358 aa2.16□□□□□ -2.06
LMBR1-222ENST00000638959 SMOC1Q9H4F8 434 aa2.16□□□□□ -2.06
LMBR1-222ENST00000638959 SUGT1Q9Y2Z0 365 aa2.16□□□□□ -2.06
LMBR1-222ENST00000638959 HS3ST4Q9Y661 456 aa2.16□□□□□ -2.06
LMBR1-222ENST00000638959 SLC26A4O43511 780 aa2.15□□□□□ -2.07
LMBR1-222ENST00000638959 RBMXL2O75526 392 aaKnown RBP2.15□□□□□ -2.07
LMBR1-222ENST00000638959 ENO2P09104 434 aaPredicted RBP2.15□□□□□ -2.07
LMBR1-222ENST00000638959 TYRP1P17643 537 aa2.15□□□□□ -2.07
LMBR1-222ENST00000638959 KCNQ1P51787 676 aa2.15□□□□□ -2.07
LMBR1-222ENST00000638959 TIGD2Q4W5G0 525 aa2.15□□□□□ -2.07
LMBR1-222ENST00000638959 FKBP15Q5T1M5 1219 aa2.15□□□□□ -2.07
LMBR1-222ENST00000638959 CD276Q5ZPR3 534 aa2.15□□□□□ -2.07
LMBR1-222ENST00000638959 HEATR6Q6AI08 1181 aaKnown RBP2.15□□□□□ -2.07
LMBR1-222ENST00000638959 TRIM48Q8IWZ4 208 aa2.15□□□□□ -2.07
LMBR1-222ENST00000638959 GSPT2Q8IYD1 628 aaKnown RBP2.15□□□□□ -2.07
LMBR1-222ENST00000638959 COPS5Q92905 334 aa2.15□□□□□ -2.07
LMBR1-222ENST00000638959 CHAMP1Q96JM3 812 aa2.15□□□□□ -2.07
LMBR1-222ENST00000638959 FGD4Q96M96 766 aa2.15□□□□□ -2.07
LMBR1-222ENST00000638959 KRTAP4-3Q9BYR4 195 aa2.15□□□□□ -2.07
LMBR1-222ENST00000638959 VPS33BQ9H267 617 aa2.15□□□□□ -2.07
LMBR1-222ENST00000638959 FBXL7Q9UJT9 491 aa2.15□□□□□ -2.07
LMBR1-222ENST00000638959 ZNF580Q9UK33 172 aa2.15□□□□□ -2.07
LMBR1-222ENST00000638959 ZNF839A8K0R7 811 aa2.14□□□□□ -2.07
LMBR1-222ENST00000638959 GREM1O60565 184 aa2.14□□□□□ -2.07
LMBR1-222ENST00000638959 DGKIO75912 1065 aa2.14□□□□□ -2.07
LMBR1-222ENST00000638959 CTSHP09668 335 aa2.14□□□□□ -2.07
LMBR1-222ENST00000638959 NR4A1P22736 598 aa2.14□□□□□ -2.07
LMBR1-222ENST00000638959 EIF4A3P38919 411 aaKnown RBP2.14□□□□□ -2.07
LMBR1-222ENST00000638959 TAP1Q03518 808 aa2.14□□□□□ -2.07
LMBR1-222ENST00000638959 APOBRQ0VD83 1088 aa2.14□□□□□ -2.07
LMBR1-222ENST00000638959 RIN1Q13671 783 aa2.14□□□□□ -2.07
LMBR1-222ENST00000638959 ZYXQ15942 572 aaKnown RBP2.14□□□□□ -2.07
LMBR1-222ENST00000638959 WDR72Q3MJ13 1102 aa2.14□□□□□ -2.07
LMBR1-222ENST00000638959 DPP8Q6V1X1 898 aaPredicted RBP2.14□□□□□ -2.07
LMBR1-222ENST00000638959 LARP4Q71RC2 724 aaKnown RBP eCLIP2.14□□□□□ -2.07
LMBR1-222ENST00000638959 FAM98AQ8NCA5 519 aaKnown RBP2.14□□□□□ -2.07
LMBR1-222ENST00000638959 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.14□□□□□ -2.07
LMBR1-222ENST00000638959 PGBD4Q96DM1 585 aa2.14□□□□□ -2.07
LMBR1-222ENST00000638959 C16orf92Q96LL3 132 aa2.14□□□□□ -2.07
LMBR1-222ENST00000638959 KLHL25Q9H0H3 589 aa2.14□□□□□ -2.07
LMBR1-222ENST00000638959 EPB41L1Q9H4G0 881 aa2.14□□□□□ -2.07
LMBR1-222ENST00000638959 AGO3Q9H9G7 860 aaKnown RBP2.14□□□□□ -2.07
LMBR1-222ENST00000638959 KBTBD4Q9NVX7 518 aa2.14□□□□□ -2.07
LMBR1-222ENST00000638959 UBP1Q9NZI7 540 aa2.14□□□□□ -2.07
LMBR1-222ENST00000638959 ZNF70Q9UC06 446 aaPredicted RBP2.14□□□□□ -2.07
LMBR1-222ENST00000638959 TRPS1Q9UHF7 1281 aa2.14□□□□□ -2.07
LMBR1-222ENST00000638959 XDHP47989 1333 aa2.14□□□□□ -2.07
LMBR1-222ENST00000638959 A0A1W2PRX2 142 aa2.13□□□□□ -2.07
LMBR1-222ENST00000638959 H7BY64 318 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms