RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 BRD1O95696 1058 aa18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 SLC7A5Q01650 507 aa18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 GUCY2DQ02846 1103 aa18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 IL31Q6EBC2 164 aa18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 TRIML2Q8N7C3 387 aa18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 HMBSP08397 361 aa18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 MDH1BQ5I0G3 518 aa18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 CHMP1BQ7LBR1 199 aa18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 GINM1Q9NU53 330 aa18.3■□□□□ 0.52
CACNA1A-253ENST00000637927 GSDMAQ96QA5 445 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 TUBB4AP04350 444 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 PPP6R3Q5H9R7 873 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 RNF168Q8IYW5 571 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 ORC4O43929 436 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 CCND2P30279 289 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 CEP70Q8NHQ1 597 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 SLC26A7Q8TE54 656 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 CNOT6LQ96LI5 555 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 IWS1Q96ST2 819 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 EPAS1Q99814 870 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 Q9H521 79 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 MED23Q9ULK4 1368 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 APOA4P06727 396 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 USP17L2Q6R6M4 530 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 TTLL11Q8NHH1 800 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 SRP68Q9UHB9 627 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 CAPZA2P47755 286 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 CACNB3P54284 484 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 GRK7Q8WTQ7 553 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 TRPV6Q9H1D0 765 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 BCAP29Q9UHQ4 241 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 ATP5JP18859 108 aa18.29■□□□□ 0.52
CACNA1A-253ENST00000637927 EDC4Q6P2E9 1401 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 TMEM247A6NEH6 219 aa18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 USP17L8P0C7I0 530 aa18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 RECQLP46063 649 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 UBE2TQ9NPD8 197 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 ADCY9O60503 1353 aa18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 GSPT1P15170 499 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 PPP3CCP48454 512 aa18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 TUBB4BP68371 445 aa18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 EGFL8Q99944 293 aa18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 IMPACTQ9P2X3 320 aa18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 PJA2O43164 708 aa18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 PIGSQ96S52 555 aa18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 MRFAP1Q9Y605 127 aa18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 ARHGAP6O43182 974 aa18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 RRAGDQ9NQL2 400 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 GFPT2O94808 682 aa18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 EPB42P16452 691 aa18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 EXOC3L4Q17RC7 722 aa18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 OSBPL10Q9BXB5 764 aa18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 ATP8A1Q9Y2Q0 1164 aa18.28■□□□□ 0.52
CACNA1A-253ENST00000637927 LOC102724428A0A0B4J2F2 783 aa18.27■□□□□ 0.52
CACNA1A-253ENST00000637927 E5RI56 91 aa18.27■□□□□ 0.52
CACNA1A-253ENST00000637927 SIK1P57059 783 aa18.27■□□□□ 0.52
CACNA1A-253ENST00000637927 PI16Q6UXB8 463 aa18.27■□□□□ 0.52
CACNA1A-253ENST00000637927 TCP11Q8WWU5 503 aa18.27■□□□□ 0.52
CACNA1A-253ENST00000637927 EAF2Q96CJ1 260 aaPredicted RBP18.27■□□□□ 0.52
CACNA1A-253ENST00000637927 CHL1O00533 1208 aa18.27■□□□□ 0.52
CACNA1A-253ENST00000637927 MSH2P43246 934 aa18.27■□□□□ 0.52
CACNA1A-253ENST00000637927 MTMR3Q13615 1198 aa18.27■□□□□ 0.52
CACNA1A-253ENST00000637927 PHLDB3Q6NSJ2 640 aa18.27■□□□□ 0.52
CACNA1A-253ENST00000637927 MAIP1Q8WWC4 291 aa18.27■□□□□ 0.52
CACNA1A-253ENST00000637927 ADCK5Q3MIX3 580 aa18.27■□□□□ 0.52
CACNA1A-253ENST00000637927 CEP170P1Q96L14 293 aa18.27■□□□□ 0.52
CACNA1A-253ENST00000637927 AP1M1Q9BXS5 423 aa18.27■□□□□ 0.52
CACNA1A-253ENST00000637927 YEATS2Q9ULM3 1422 aa18.27■□□□□ 0.52
CACNA1A-253ENST00000637927 TRIM32Q13049 653 aa18.27■□□□□ 0.52
CACNA1A-253ENST00000637927 STXBP2Q15833 593 aa18.27■□□□□ 0.52
CACNA1A-253ENST00000637927 WARS2Q9UGM6 360 aaKnown RBP18.27■□□□□ 0.52
CACNA1A-253ENST00000637927 SERPINI2O75830 405 aa18.27■□□□□ 0.51
CACNA1A-253ENST00000637927 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.27■□□□□ 0.51
CACNA1A-253ENST00000637927 TMEM63CQ9P1W3 806 aa18.27■□□□□ 0.51
CACNA1A-253ENST00000637927 TRPC5Q9UL62 973 aaPredicted RBP18.27■□□□□ 0.51
CACNA1A-253ENST00000637927 SRGAP2O75044 1071 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 ALFQ53S48 1182 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 RETREG2Q8NC44 543 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 LMBRD1Q9NUN5 540 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 GTF2A1LQ9UNN4 478 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 HEY1Q9Y5J3 304 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 USP17L3A6NCW0 530 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 USP17L4A6NCW7 530 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 ERVV-2B6SEH9 535 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 SERPINB2P05120 415 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 SLC27A3Q5K4L6 730 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 USP17L1Q7RTZ2 530 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 ARMC9Q7Z3E5 817 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 TDRD7Q8NHU6 1098 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 MAGOHBQ96A72 148 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 TRAF3IP3Q9Y228 551 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 UBXN8O00124 270 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 TSPY1Q01534 308 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 COBLL1Q53SF7 1204 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 IL17REQ8NFR9 667 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 CNKSR1Q969H4 720 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 MRFAP1L1Q96HT8 127 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 ZNF263O14978 683 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 SEC31AO94979 1220 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms