RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 TRAF3IP3Q9Y228 551 aa18.29■□□□□ 0.52
CTSD-213ENST00000637915 PARP14Q460N5 1801 aa18.29■□□□□ 0.52
CTSD-213ENST00000637915 ZBTB39O15060 712 aa18.28■□□□□ 0.52
CTSD-213ENST00000637915 CYLC1P35663 651 aaPredicted RBP18.28■□□□□ 0.52
CTSD-213ENST00000637915 KCNMA1Q12791 1236 aa18.28■□□□□ 0.52
CTSD-213ENST00000637915 BMT2Q1RMZ1 405 aa18.28■□□□□ 0.52
CTSD-213ENST00000637915 MUM1L1Q5H9M0 696 aa18.28■□□□□ 0.52
CTSD-213ENST00000637915 SMCR8Q8TEV9 937 aaPredicted RBP18.28■□□□□ 0.52
CTSD-213ENST00000637915 RIT2Q99578 217 aa18.28■□□□□ 0.52
CTSD-213ENST00000637915 WRAP73Q9P2S5 460 aaPredicted RBP18.28■□□□□ 0.52
CTSD-213ENST00000637915 PRPF6O94906 941 aaKnown RBP18.28■□□□□ 0.52
CTSD-213ENST00000637915 BCRP11274 1271 aa18.28■□□□□ 0.52
CTSD-213ENST00000637915 NR2F2P24468 414 aa18.28■□□□□ 0.52
CTSD-213ENST00000637915 KRT83P78385 493 aa18.28■□□□□ 0.52
CTSD-213ENST00000637915 EPHA7Q15375 998 aa18.28■□□□□ 0.52
CTSD-213ENST00000637915 C1orf186Q6ZWK4 172 aa18.28■□□□□ 0.52
CTSD-213ENST00000637915 RPAP3Q9H6T3 665 aaPredicted RBP18.28■□□□□ 0.52
CTSD-213ENST00000637915 POLD4Q9HCU8 107 aa18.28■□□□□ 0.52
CTSD-213ENST00000637915 OLFML3Q9NRN5 406 aa18.28■□□□□ 0.52
CTSD-213ENST00000637915 HOMER2Q9NSB8 354 aa18.28■□□□□ 0.52
CTSD-213ENST00000637915 TRIM10Q9UDY6 481 aa18.28■□□□□ 0.52
CTSD-213ENST00000637915 EFCAB8A8MWE9 144 aa18.27■□□□□ 0.52
CTSD-213ENST00000637915 EIF3CLB5ME19 914 aaKnown RBP18.27■□□□□ 0.52
CTSD-213ENST00000637915 CETN3O15182 167 aa18.27■□□□□ 0.52
CTSD-213ENST00000637915 GAP43P17677 238 aa18.27■□□□□ 0.52
CTSD-213ENST00000637915 USP14P54578 494 aa18.27■□□□□ 0.52
CTSD-213ENST00000637915 PPP2R3AQ06190 1150 aa18.27■□□□□ 0.52
CTSD-213ENST00000637915 SPP2Q13103 211 aa18.27■□□□□ 0.52
CTSD-213ENST00000637915 DCAF15Q66K64 600 aa18.27■□□□□ 0.52
CTSD-213ENST00000637915 BAP1Q92560 729 aa18.27■□□□□ 0.52
CTSD-213ENST00000637915 EIF3CQ99613 913 aaKnown RBP18.27■□□□□ 0.52
CTSD-213ENST00000637915 HAUS4Q9H6D7 363 aa18.27■□□□□ 0.52
CTSD-213ENST00000637915 KCNH7Q9NS40 1196 aa18.27■□□□□ 0.52
CTSD-213ENST00000637915 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.27■□□□□ 0.52
CTSD-213ENST00000637915 FRMPD4Q14CM0 1322 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 PDXKO00764 312 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 ZNF662Q6ZS27 426 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 NIPA1Q7RTP0 329 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 SCYL3Q8IZE3 742 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 NEK11Q8NG66 645 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 SYTL5Q8TDW5 730 aaPredicted RBP18.26■□□□□ 0.51
CTSD-213ENST00000637915 NACC1Q96RE7 527 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 ARID3AQ99856 593 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 ZNF112Q9UJU3 913 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 ASTN1O14525 1302 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 CTAGE9A4FU28 777 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 LRRC53A6NM62 1247 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 SFI1A8K8P3 1242 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 GCNT3O95395 438 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 PLEKP08567 350 aaPredicted RBP18.26■□□□□ 0.51
CTSD-213ENST00000637915 ANGEL2Q5VTE6 544 aaKnown RBP18.26■□□□□ 0.51
CTSD-213ENST00000637915 PCNX4Q63HM2 1172 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 FBXO38Q6PIJ6 1188 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 UBXN4Q92575 508 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 ZKSCAN4Q969J2 545 aaPredicted RBP18.26■□□□□ 0.51
CTSD-213ENST00000637915 LXNQ9BS40 222 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 CCDC94Q9BW85 323 aaPredicted RBP18.26■□□□□ 0.51
CTSD-213ENST00000637915 EDEM3Q9BZQ6 932 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 MAP3K20Q9NYL2 800 aaKnown RBP18.26■□□□□ 0.51
CTSD-213ENST00000637915 ARHGAP20Q9P2F6 1191 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 FAM184BQ9ULE4 1060 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 GUCA1BQ9UMX6 200 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 TFR2Q9UP52 801 aa18.26■□□□□ 0.51
CTSD-213ENST00000637915 LOXHD1Q8IVV2 1947 aa18.25■□□□□ 0.51
CTSD-213ENST00000637915 DDX39AO00148 427 aaKnown RBP18.25■□□□□ 0.51
CTSD-213ENST00000637915 FAM13AO94988 1023 aa18.25■□□□□ 0.51
CTSD-213ENST00000637915 BACE1P56817 501 aa18.25■□□□□ 0.51
CTSD-213ENST00000637915 MRPS9P82933 396 aaKnown RBP18.25■□□□□ 0.51
CTSD-213ENST00000637915 RRAGAQ7L523 313 aa18.25■□□□□ 0.51
CTSD-213ENST00000637915 BANK1Q8NDB2 785 aa18.25■□□□□ 0.51
CTSD-213ENST00000637915 TYW1Q9NV66 732 aaKnown RBP18.25■□□□□ 0.51
CTSD-213ENST00000637915 PKD2L1Q9P0L9 805 aa18.25■□□□□ 0.51
CTSD-213ENST00000637915 UBIAD1Q9Y5Z9 338 aa18.25■□□□□ 0.51
CTSD-213ENST00000637915 DHX15O43143 795 aaKnown RBP18.24■□□□□ 0.51
CTSD-213ENST00000637915 CALUO43852 315 aaPredicted RBP18.24■□□□□ 0.51
CTSD-213ENST00000637915 ZBED4O75132 1171 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 IPO7O95373 1038 aaKnown RBP18.24■□□□□ 0.51
CTSD-213ENST00000637915 RPS6P62753 249 aaKnown RBP18.24■□□□□ 0.51
CTSD-213ENST00000637915 TKFCQ3LXA3 575 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 CCDC122Q5T0U0 273 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 PRAMEF18Q5VWM3 479 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 KIAA1328Q86T90 577 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 APOBEC3FQ8IUX4 373 aaKnown RBP18.24■□□□□ 0.51
CTSD-213ENST00000637915 NLGN2Q8NFZ4 835 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 WRNIP1Q96S55 665 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 NAPGQ99747 312 aaPredicted RBP18.24■□□□□ 0.51
CTSD-213ENST00000637915 CDC23Q9UJX2 597 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 FZD1Q9UP38 647 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 RCCD1A6NED2 376 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 VWA5AO00534 786 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 NOL4O94818 638 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 PTPRAP18433 802 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 KCNA1Q09470 495 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 ITGB3BPQ13352 177 aaPredicted RBP18.24■□□□□ 0.51
CTSD-213ENST00000637915 PDXDC1Q6P996 788 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 ARHGAP27Q6ZUM4 889 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 CACNA2D4Q7Z3S7 1137 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 MYCT1Q8N699 235 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 SAMD3Q8N6K7 520 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 ZNF280CQ8ND82 737 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms