RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 CCT5P48643 541 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 EPHB3P54753 998 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 FCGRTP55899 365 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 HSD17B7P56937 341 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 INHBEP58166 350 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 PLIN5Q00G26 463 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 DMTNQ08495 405 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 COX10Q12887 443 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 PRKG2Q13237 762 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 TCIRG1Q13488 830 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 GAB4Q2WGN9 574 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 DNTTIP2Q5QJE6 756 aaKnown RBP3.47□□□□□ -1.85
VIM-210ENST00000637053 UTP14CQ5TAP6 766 aaKnown RBP3.47□□□□□ -1.85
VIM-210ENST00000637053 ISM2Q6H9L7 571 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 FAM180BQ6P0A1 224 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 HHIPL2Q6UWX4 724 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 DTHD1Q6ZMT9 781 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 OTOP3Q7RTS5 596 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 CATSPER4Q7RTX7 472 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 TMPRSS7Q7RTY8 843 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 MILR1Q7Z6M3 343 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 GALNT5Q7Z7M9 940 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 CREG2Q8IUH2 290 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 PASD1Q8IV76 773 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 SYNPOQ8N3V7 929 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 CELF2-AS1Q8N7Q2 184 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 PDZD8Q8NEN9 1154 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 GABPB2Q8TAK5 448 aaPredicted RBP3.47□□□□□ -1.85
VIM-210ENST00000637053 UHMK1Q8TAS1 419 aaKnown RBP3.47□□□□□ -1.85
VIM-210ENST00000637053 EPS8L3Q8TE67 593 aaKnown RBP3.47□□□□□ -1.85
VIM-210ENST00000637053 THAP3Q8WTV1 239 aaPredicted RBP3.47□□□□□ -1.85
VIM-210ENST00000637053 NUP133Q8WUM0 1156 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 ALKBH8Q96BT7 664 aaKnown RBP3.47□□□□□ -1.85
VIM-210ENST00000637053 ZBTB10Q96DT7 871 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 SIGLEC10Q96LC7 697 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 PPM1MQ96MI6 270 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 UROC1Q96N76 676 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 ZNF396Q96N95 335 aaPredicted RBP3.47□□□□□ -1.85
VIM-210ENST00000637053 ZMAT2Q96NC0 199 aaKnown RBP3.47□□□□□ -1.85
VIM-210ENST00000637053 FAM129BQ96TA1 746 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 MRPL9Q9BYD2 267 aaKnown RBP3.47□□□□□ -1.85
VIM-210ENST00000637053 RHOBTB2Q9BYZ6 727 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 ALG13Q9NP73 1137 aaKnown RBP3.47□□□□□ -1.85
VIM-210ENST00000637053 PRDM11Q9NQV5 511 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 PICK1Q9NRD5 415 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 BLOC1S4Q9NUP1 217 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 MKS1Q9NXB0 559 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 ARHGAP28Q9P2N2 729 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 PRKAG3Q9UGI9 489 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 EBF1Q9UH73 591 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 MBD1Q9UIS9 605 aaPredicted RBP3.47□□□□□ -1.85
VIM-210ENST00000637053 TMX2Q9Y320 296 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 LUC7L2Q9Y383 392 aaKnown RBP3.47□□□□□ -1.85
VIM-210ENST00000637053 R3HCC1Q9Y3T6 440 aaKnown RBP3.47□□□□□ -1.85
VIM-210ENST00000637053 PTCH2Q9Y6C5 1203 aa3.47□□□□□ -1.85
VIM-210ENST00000637053 PDPK1O15530 556 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 PRICKLE3O43900 615 aaPredicted RBP3.46□□□□□ -1.86
VIM-210ENST00000637053 AKR1B10O60218 316 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 PLOD3O60568 738 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 RFPL1O75677 317 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 CNOT4O95628 575 aaKnown RBP3.46□□□□□ -1.86
VIM-210ENST00000637053 MSL3P1P0C860 447 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 PHKG2P15735 406 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 XBP1P17861 261 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 TNFRSF1AP19438 455 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 CAPN3P20807 821 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 GRK2P25098 689 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 GALNSP34059 522 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 KRT20P35900 424 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 CASP7P55210 303 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 PLP2Q04941 152 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 EIF2B5Q13144 721 aaKnown RBP3.46□□□□□ -1.86
VIM-210ENST00000637053 GRM1Q13255 1194 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 MTMR1Q13613 665 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 RASGRF1Q13972 1273 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 NBPF8Q3BBV2 869 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 RASIP1Q5U651 963 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 WWC2Q6AWC2 1192 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 CXorf57Q6NSI4 855 aaKnown RBP3.46□□□□□ -1.86
VIM-210ENST00000637053 LETMD1Q6P1Q0 360 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 XRRA1Q6P2D8 792 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 RNF180Q86T96 592 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 TBC1D1Q86TI0 1168 aaPredicted RBP3.46□□□□□ -1.86
VIM-210ENST00000637053 ZBTB46Q86UZ6 589 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 NIM1KQ8IY84 436 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 ELOA2Q8IYF1 753 aaPredicted RBP3.46□□□□□ -1.86
VIM-210ENST00000637053 C7orf61Q8IZ16 206 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 LILRA2Q8N149 483 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 AFAP1L2Q8N4X5 818 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 TAB3Q8N5C8 712 aaPredicted RBP3.46□□□□□ -1.86
VIM-210ENST00000637053 LSMEM1Q8N8F7 131 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 JMYQ8N9B5 988 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 NAXEQ8NCW5 288 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 PHC3Q8NDX5 983 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 OR8H1Q8NGG4 311 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 USP33Q8TEY7 942 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 RSAD2Q8WXG1 361 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 TEKT1Q969V4 418 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 CHMP4CQ96CF2 233 aa3.46□□□□□ -1.86
VIM-210ENST00000637053 MTMR8Q96EF0 704 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms