RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 GSPT2Q8IYD1 628 aaKnown RBP15.42■□□□□ 0.06
GABRB3-219ENST00000636466 PNPLA7Q6ZV29 1317 aa15.42■□□□□ 0.06
GABRB3-219ENST00000636466 H7C0C1 242 aa15.42■□□□□ 0.06
GABRB3-219ENST00000636466 K7ERI5 159 aa15.42■□□□□ 0.06
GABRB3-219ENST00000636466 PGRMC1O00264 195 aaKnown RBP15.42■□□□□ 0.06
GABRB3-219ENST00000636466 ATP5OP48047 213 aa15.42■□□□□ 0.06
GABRB3-219ENST00000636466 CCDC13Q8IYE1 715 aa15.42■□□□□ 0.06
GABRB3-219ENST00000636466 DAGLAQ9Y4D2 1042 aa15.42■□□□□ 0.06
GABRB3-219ENST00000636466 ABCB11O95342 1321 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 RNF40O75150 1001 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 ATF2P15336 505 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 GFPT1Q06210 699 aaPredicted RBP15.41■□□□□ 0.06
GABRB3-219ENST00000636466 ZNF746Q6NUN9 644 aaPredicted RBP15.41■□□□□ 0.06
GABRB3-219ENST00000636466 TXNRD3Q86VQ6 643 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 NME8Q8N427 588 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 DYDC2Q96IM9 177 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 PPP1R12CQ9BZL4 782 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 ZCCHC17Q9NP64 241 aaKnown RBP15.41■□□□□ 0.06
GABRB3-219ENST00000636466 RGL1Q9NZL6 768 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 TBK1Q9UHD2 729 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 FBXO2Q9UK22 296 aaPredicted RBP15.41■□□□□ 0.06
GABRB3-219ENST00000636466 CCDC151A5D8V7 595 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 SNX16P57768 344 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 DHX9Q08211 1270 aaKnown RBP15.41■□□□□ 0.06
GABRB3-219ENST00000636466 NAA25Q14CX7 972 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 SUPT20HL1Q3ZLR7 823 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 ANKRD20A3Q5VUR7 823 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 CCDC170Q8IYT3 715 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 RILPQ96NA2 401 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 WRNIP1Q96S55 665 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 KCNH2Q12809 1159 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 GKAP1Q5VSY0 366 aaPredicted RBP15.41■□□□□ 0.06
GABRB3-219ENST00000636466 SDCCAG8Q86SQ7 713 aaPredicted RBP15.41■□□□□ 0.06
GABRB3-219ENST00000636466 MAIP1Q8WWC4 291 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 STMN2Q93045 179 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 MCUR1Q96AQ8 359 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 RIOK1Q9BRS2 568 aaKnown RBP15.41■□□□□ 0.06
GABRB3-219ENST00000636466 NUB1Q9Y5A7 615 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 DLC1Q96QB1 1528 aa15.41■□□□□ 0.06
GABRB3-219ENST00000636466 POLR2BP30876 1174 aaKnown RBP15.4■□□□□ 0.06
GABRB3-219ENST00000636466 COASYQ13057 564 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 CALN1Q9BXU9 219 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 SH3GLB2Q9NR46 395 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 PACSIN2Q9UNF0 486 aaPredicted RBP15.4■□□□□ 0.06
GABRB3-219ENST00000636466 CAPN7Q9Y6W3 813 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 OVOS2A0A0G2JMS6 1433 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 ESYT3A0FGR9 886 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 H0YCG3 227 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 CSPG5O95196 566 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 SERPING1P05155 500 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 YWHAEP62258 255 aaKnown RBP15.4■□□□□ 0.06
GABRB3-219ENST00000636466 FAM160B1Q5W0V3 765 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 HOMER3Q9NSC5 361 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 PARP2Q9UGN5 583 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 POLR1AO95602 1720 aaPredicted RBP15.4■□□□□ 0.06
GABRB3-219ENST00000636466 SLC16A4O15374 487 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 NCK2O43639 380 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 TRIM49P0CI25 452 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 TRIM49CP0CI26 452 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 USP14P54578 494 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 PSMD2Q13200 908 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 MTMR1Q13613 665 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 SGO2Q562F6 1265 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 TRIM50Q86XT4 487 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 FAM49AQ9H0Q0 323 aaPredicted RBP15.4■□□□□ 0.06
GABRB3-219ENST00000636466 NFU1Q9UMS0 254 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 WDR19Q8NEZ3 1342 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 DIP2AQ14689 1571 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 ATP2C1P98194 919 aaPredicted RBP15.4■□□□□ 0.06
GABRB3-219ENST00000636466 NEDD9Q14511 834 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 IQCB1Q15051 598 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 PRAMEF18Q5VWM3 479 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 DNAJC12Q9UKB3 198 aa15.4■□□□□ 0.06
GABRB3-219ENST00000636466 SGK1O00141 431 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 YWHAGP61981 247 aaKnown RBP eCLIP15.39■□□□□ 0.05
GABRB3-219ENST00000636466 CASP8Q14790 479 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 CCDC125Q86Z20 511 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 FAM71BQ8TC56 605 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 TMEM206Q9H813 350 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 NR3C1P04150 777 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 PNMA6AP0CW24 399 aaPredicted RBP15.39■□□□□ 0.05
GABRB3-219ENST00000636466 ADRA2BP18089 450 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 PPP2R5AQ15172 486 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 RCSD1Q6JBY9 416 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 PADI6Q6TGC4 694 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 HAUS1Q96CS2 278 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 WDR24Q96S15 920 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 MED4Q9NPJ6 270 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 ORC4O43929 436 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 PALMO75781 387 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 GABPAQ06546 454 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 FAM160B2Q86V87 743 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 CCDC117Q8IWD4 279 aaPredicted RBP15.39■□□□□ 0.05
GABRB3-219ENST00000636466 CACNA2D3Q8IZS8 1091 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 CHP1Q99653 195 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 SPC25Q9HBM1 224 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 ADGRG1Q9Y653 693 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 PASKQ96RG2 1323 aa15.39■□□□□ 0.05
GABRB3-219ENST00000636466 NPHP3-ACAD11A0A0J9YXS1 232 aa15.38■□□□□ 0.05
GABRB3-219ENST00000636466 PASD1Q8IV76 773 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms