RNA–Protein interactions for RNA: ENST00000636340.1

GABRA1-213, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-213ENST00000636340 JRKLQ9Y4A0 524 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 CAPN6Q9Y6Q1 641 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 UTRNP46939 3433 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 MACROD2A1Z1Q3 448 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 EDIL3O43854 480 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 PPFIA4O75335 1185 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 TCF3P15923 654 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 MTIF2P46199 727 aaKnown RBP6.91□□□□□ -1.3
GABRA1-213ENST00000636340 ASTE1Q2TB18 679 aaPredicted RBP6.91□□□□□ -1.3
GABRA1-213ENST00000636340 SLC4A8Q2Y0W8 1093 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 NBPF20Q3BBV1 942 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 VWA3BQ502W6 1294 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 CCDC178Q5BJE1 867 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 FAM26DQ5JW98 314 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 C9orf131Q5VYM1 1079 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 SH3RF3Q8TEJ3 882 aaPredicted RBP6.91□□□□□ -1.3
GABRA1-213ENST00000636340 RUBCNQ92622 972 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 GDAP1L1Q96MZ0 367 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 LZTS2Q9BRK4 669 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 SPZ1Q9BXG8 430 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 TSPAN10Q9H1Z9 355 aaPredicted RBP6.91□□□□□ -1.3
GABRA1-213ENST00000636340 MLXIPQ9HAP2 919 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 BLOC1S4Q9NUP1 217 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 FAM184BQ9ULE4 1060 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 PCDHA13Q9Y5I0 950 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 CCDC88AQ3V6T2 1871 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 ZNF831Q5JPB2 1677 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 ERVH48-1M5A8F1 160 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 PJA2O43164 708 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 LZTS3O60299 673 aaPredicted RBP6.9□□□□□ -1.3
GABRA1-213ENST00000636340 TM4SF1P30408 202 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 SCNN1DP51172 638 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 CORO7P57737 925 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 ASIC1P78348 528 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 GRB10Q13322 594 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 TBC1D9BQ66K14 1250 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 CNNM4Q6P4Q7 775 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 KRT25Q7Z3Z0 450 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 AMIGO3Q86WK7 504 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 AMOTL1Q8IY63 956 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 LINC00116Q8NCU8 138 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 TRIM58Q8NG06 486 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 CAGE1Q8TC20 777 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 CCDC42Q96M95 316 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 PNMA5Q96PV4 448 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 MTMR9Q96QG7 549 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 SH3GL2Q99962 352 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 LRRC1Q9BTT6 524 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 ANKRD2Q9GZV1 360 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 ZNF358Q9NW07 568 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 DMGDHQ9UI17 866 aaKnown RBP6.9□□□□□ -1.3
GABRA1-213ENST00000636340 SALL4Q9UJQ4 1053 aa6.9□□□□□ -1.3
GABRA1-213ENST00000636340 ABCB11O95342 1321 aa6.9□□□□□ -1.31
GABRA1-213ENST00000636340 SNED1Q8TER0 1413 aa6.9□□□□□ -1.31
GABRA1-213ENST00000636340 MYMKA6NI61 221 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 KLRF2D3W0D1 207 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 CCNT1O60563 726 aaKnown RBP6.89□□□□□ -1.31
GABRA1-213ENST00000636340 TACC1O75410 805 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 IPO7O95373 1038 aaKnown RBP6.89□□□□□ -1.31
GABRA1-213ENST00000636340 MOCS3O95396 460 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 GOLGA8HP0CJ92 632 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 EIF4A3P38919 411 aaKnown RBP6.89□□□□□ -1.31
GABRA1-213ENST00000636340 TECP42680 631 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 MAGEA9P43362 315 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 NOP2P46087 812 aaKnown RBP6.89□□□□□ -1.31
GABRA1-213ENST00000636340 NOVP48745 357 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 KIF11P52732 1056 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 EHHADHQ08426 723 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 ORC2Q13416 577 aaPredicted RBP6.89□□□□□ -1.31
GABRA1-213ENST00000636340 NONOQ15233 471 aaKnown RBP eCLIP6.89□□□□□ -1.31
GABRA1-213ENST00000636340 SPA17Q15506 151 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 GRIK5Q16478 980 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 TSNAXIP1Q2TAA8 658 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 LETM2Q2VYF4 491 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 INTS6LQ5JSJ4 861 aaKnown RBP6.89□□□□□ -1.31
GABRA1-213ENST00000636340 FKBP15Q5T1M5 1219 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 IQCEQ6IPM2 695 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 LRRC55Q6ZSA7 311 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 NEK8Q86SG6 692 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 SLC44A5Q8NCS7 719 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 SPATA4Q8NEY3 305 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 CCDC47Q96A33 483 aaKnown RBP6.89□□□□□ -1.31
GABRA1-213ENST00000636340 KCTD15Q96SI1 283 aaPredicted RBP6.89□□□□□ -1.31
GABRA1-213ENST00000636340 OSBPL9Q96SU4 736 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 SETDB2Q96T68 719 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 CRACR2AQ9BSW2 395 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 IFIH1Q9BYX4 1025 aaKnown RBP6.89□□□□□ -1.31
GABRA1-213ENST00000636340 CPVLQ9H3G5 476 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 NDST4Q9H3R1 872 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 SLC39A2Q9NP94 309 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 JADE2Q9NQC1 790 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 RAB6BQ9NRW1 208 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 CCNL1Q9UK58 526 aaPredicted RBP6.89□□□□□ -1.31
GABRA1-213ENST00000636340 JAG2Q9Y219 1238 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 COL24A1Q17RW2 1714 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 PVALEFA0A1B0GWK0 134 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 GOLGA6BA6NDN3 693 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 SMCO2A6NFE2 343 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 VGLL3A8MV65 326 aa6.89□□□□□ -1.31
GABRA1-213ENST00000636340 TSPY3P0CV98 308 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms