RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 CYP4F8P98187 520 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 MVKQ03426 396 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 KIR3DS1Q14943 382 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 MPZL3Q6UWV2 235 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 USP53Q70EK8 1073 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 NOP9Q86U38 636 aaKnown RBP3.2□□□□□ -1.9
CD46-219ENST00000636114 NME9Q86XW9 330 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 IRF2BP1Q8IU81 584 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 KCNH5Q8NCM2 988 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 RTF1Q92541 710 aaKnown RBP3.2□□□□□ -1.9
CD46-219ENST00000636114 GCC1Q96CN9 775 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 INTS4Q96HW7 963 aaKnown RBP3.2□□□□□ -1.9
CD46-219ENST00000636114 DHRS4Q9BTZ2 278 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 PDLIM7Q9NR12 457 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 FAM53CQ9NYF3 392 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 TMEFF2Q9UIK5 374 aaPredicted RBP3.2□□□□□ -1.9
CD46-219ENST00000636114 MRPS23Q9Y3D9 190 aaKnown RBP3.2□□□□□ -1.9
CD46-219ENST00000636114 PTCH2Q9Y6C5 1203 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 LRRC7Q96NW7 1537 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 AKAP12Q02952 1782 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 OVOS2A0A0J9YW53 1432 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 OVOS2Q6IE36 1432 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 C3P01024 1663 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 SBNO1A3KN83 1393 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 FLT4P35916 1363 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 KIAA0232Q92628 1395 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 CCDC163A0A0D9SF12 145 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 A0A1W2PQJ5 194 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 ZNF503-AS2A6NEH8 195 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.2□□□□□ -1.9
CD46-219ENST00000636114 MYO1BO43795 1136 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 TRIM27P14373 513 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 GALK1P51570 392 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 GTF2A2P52657 109 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 BECN1Q14457 450 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 INF2Q27J81 1249 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 TWISTNBQ3B726 338 aaPredicted RBP3.2□□□□□ -1.9
CD46-219ENST00000636114 FAM209AQ5JX71 171 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 ADGRF1Q5T601 910 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 FOXB2Q5VYV0 432 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 RSPO2Q6UXX9 243 aaPredicted RBP3.2□□□□□ -1.9
CD46-219ENST00000636114 SIRT2Q8IXJ6 389 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 LZTR1Q8N653 840 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 PANK1Q8TE04 598 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 SH3TC2Q8TF17 1288 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 DCAF4Q8WV16 495 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 SSH1Q8WYL5 1049 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 KISS1RQ969F8 398 aaPredicted RBP3.2□□□□□ -1.9
CD46-219ENST00000636114 LIN37Q96GY3 246 aaPredicted RBP3.2□□□□□ -1.9
CD46-219ENST00000636114 EXOC2Q96KP1 924 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 TNFRSF12AQ9NP84 129 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 GPR27Q9NS67 375 aa3.2□□□□□ -1.9
CD46-219ENST00000636114 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.2□□□□□ -1.91e-12■■□□□ 12
CD46-219ENST00000636114 NOB1Q9ULX3 412 aaKnown RBP3.2□□□□□ -1.9
CD46-219ENST00000636114 TIMM13Q9Y5L4 95 aaPredicted RBP3.2□□□□□ -1.9
CD46-219ENST00000636114 SSH2Q76I76 1423 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 PTPRUQ92729 1446 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 PTPRCP08575 1304 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 FER1L4A9Z1Z3 1794 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 RTL1A6NKG5 1358 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 ARHGEF10O15013 1369 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 MAP2P11137 1827 aaKnown RBP3.19□□□□□ -1.9
CD46-219ENST00000636114 ARNTLO00327 626 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 IGHDP01880 384 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 HMOX1P09601 288 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 MSL3P1P0C860 447 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 PDE6BP35913 854 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 AMPHP49418 695 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 ERVFRD-1P60508 538 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 RPL11P62913 178 aaKnown RBP3.19□□□□□ -1.9
CD46-219ENST00000636114 EIF4A2Q14240 407 aaKnown RBP3.19□□□□□ -1.9
CD46-219ENST00000636114 NTRK3Q16288 839 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 SULT6B1Q6IMI4 303 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 STYK1Q6J9G0 422 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 CABP7Q86V35 215 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 ITPRIPQ8IWB1 547 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 SMC5Q8IY18 1101 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 RCBTB1Q8NDN9 531 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 USP33Q8TEY7 942 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 PTPRN2Q92932 1015 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 TSR2Q969E8 191 aaKnown RBP3.19□□□□□ -1.9
CD46-219ENST00000636114 ZFYVE21Q9BQ24 234 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 PHF20Q9BVI0 1012 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 ZBTB40Q9NUA8 1239 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 GULP1Q9UBP9 304 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 RWDD3Q9Y3V2 267 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.19□□□□□ -1.9
CD46-219ENST00000636114 RIMS1Q86UR5 1692 aaKnown RBP3.19□□□□□ -1.9
CD46-219ENST00000636114 TOPAZ1Q8N9V7 1692 aa3.19□□□□□ -1.9
CD46-219ENST00000636114 CEP170BQ9Y4F5 1589 aaPredicted RBP3.18□□□□□ -1.9
CD46-219ENST00000636114 OR14I1A6ND48 311 aa3.18□□□□□ -1.9
CD46-219ENST00000636114 CHL1O00533 1208 aa3.18□□□□□ -1.9
CD46-219ENST00000636114 SRGAP3O43295 1099 aa3.18□□□□□ -1.9
CD46-219ENST00000636114 MPOP05164 745 aa3.18□□□□□ -1.9
CD46-219ENST00000636114 LCP1P13796 627 aa3.18□□□□□ -1.9
CD46-219ENST00000636114 YBX3P16989 372 aaKnown RBP eCLIP3.18□□□□□ -1.9
CD46-219ENST00000636114 TACR1P25103 407 aa3.18□□□□□ -1.9
CD46-219ENST00000636114 RGS3P49796 1198 aa3.18□□□□□ -1.9
CD46-219ENST00000636114 SQSTM1Q13501 440 aa3.18□□□□□ -1.9
CD46-219ENST00000636114 RRS1Q15050 365 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms