RNA–Protein interactions for RNA: ENST00000628061.1

AC004039.1-204, humanhuman

TSL 5

Gene AC004039.1, Length 776 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004039.1-204ENST00000628061 TUSC3Q13454 348 aa4.97□□□□□ -1.61
AC004039.1-204ENST00000628061 TMEM145Q8NBT3 493 aa4.97□□□□□ -1.61
AC004039.1-204ENST00000628061 CLIP3Q96DZ5 547 aa4.97□□□□□ -1.61
AC004039.1-204ENST00000628061 SEC16BQ96JE7 1060 aa4.97□□□□□ -1.61
AC004039.1-204ENST00000628061 C12orf65Q9H3J6 166 aaKnown RBP4.97□□□□□ -1.61
AC004039.1-204ENST00000628061 CCSER2Q9H7U1 834 aa4.97□□□□□ -1.61
AC004039.1-204ENST00000628061 NR2E1Q9Y466 385 aa4.97□□□□□ -1.61
AC004039.1-204ENST00000628061 NPFFR2Q9Y5X5 522 aa4.97□□□□□ -1.61
AC004039.1-204ENST00000628061 ESYT3A0FGR9 886 aa4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 CUTAO60888 179 aa4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 KRT4P19013 534 aa4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 DNAJA1P31689 397 aaKnown RBP4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 RPS19P39019 145 aaKnown RBP4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 IL12RB1P42701 662 aa4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 RRADP55042 308 aa4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 GFRA1P56159 465 aa4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 TOP3AQ13472 1001 aaPredicted RBP4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 SV2CQ496J9 727 aa4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 ZMAT1Q5H9K5 638 aa4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 ULK2Q8IYT8 1036 aa4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 MRRFQ96E11 262 aaKnown RBP4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 C1orf159Q96HA4 380 aa4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 PRRX2Q99811 253 aa4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 PDGFDQ9GZP0 370 aaPredicted RBP4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 TLR9Q9NR96 1032 aa4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 LRP2BPQ9P2M1 347 aa4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 PPARGC1AQ9UBK2 798 aaKnown RBP4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 REXO2Q9Y3B8 237 aaKnown RBP4.96□□□□□ -1.62
AC004039.1-204ENST00000628061 ATXN1P54253 815 aaKnown RBP4.95□□□□□ -1.62
AC004039.1-204ENST00000628061 COL10A1Q03692 680 aa4.95□□□□□ -1.62
AC004039.1-204ENST00000628061 SLC35F1Q5T1Q4 408 aa4.95□□□□□ -1.62
AC004039.1-204ENST00000628061 LRCH2Q5VUJ6 765 aa4.95□□□□□ -1.62
AC004039.1-204ENST00000628061 Q6ZPA2 131 aa4.95□□□□□ -1.62
AC004039.1-204ENST00000628061 OTOP3Q7RTS5 596 aa4.95□□□□□ -1.62
AC004039.1-204ENST00000628061 SLC2A4RGQ9NR83 387 aa4.95□□□□□ -1.62
AC004039.1-204ENST00000628061 AURKAIP1Q9NWT8 199 aaPredicted RBP4.95□□□□□ -1.62
AC004039.1-204ENST00000628061 CEP72Q9P209 647 aa4.95□□□□□ -1.62
AC004039.1-204ENST00000628061 TELO2Q9Y4R8 837 aa4.95□□□□□ -1.62
AC004039.1-204ENST00000628061 MSX2P35548 267 aaPredicted RBP4.94□□□□□ -1.62
AC004039.1-204ENST00000628061 NFYCQ13952 458 aa4.94□□□□□ -1.62
AC004039.1-204ENST00000628061 TBR1Q16650 682 aa4.94□□□□□ -1.62
AC004039.1-204ENST00000628061 UHMK1Q8TAS1 419 aaKnown RBP4.94□□□□□ -1.62
AC004039.1-204ENST00000628061 SCYL1Q96KG9 808 aa4.94□□□□□ -1.62
AC004039.1-204ENST00000628061 TTPALQ9BTX7 342 aa4.94□□□□□ -1.62
AC004039.1-204ENST00000628061 TGIF2Q9GZN2 237 aa4.94□□□□□ -1.62
AC004039.1-204ENST00000628061 ACBD3Q9H3P7 528 aa4.94□□□□□ -1.62
AC004039.1-204ENST00000628061 PLA2G3Q9NZ20 509 aa4.94□□□□□ -1.62
AC004039.1-204ENST00000628061 FOXN1O15353 648 aa4.93□□□□□ -1.62
AC004039.1-204ENST00000628061 ARHGAP6O43182 974 aa4.93□□□□□ -1.62
AC004039.1-204ENST00000628061 MSCO60682 206 aa4.93□□□□□ -1.62
AC004039.1-204ENST00000628061 COL6A2P12110 1019 aa4.93□□□□□ -1.62
AC004039.1-204ENST00000628061 BMP5P22003 454 aa4.93□□□□□ -1.62
AC004039.1-204ENST00000628061 CSRP2Q16527 193 aa4.93□□□□□ -1.62
AC004039.1-204ENST00000628061 LARP1BQ659C4 914 aaKnown RBP4.93□□□□□ -1.62
AC004039.1-204ENST00000628061 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.93□□□□□ -1.62
AC004039.1-204ENST00000628061 ACTR10Q9NZ32 417 aa4.93□□□□□ -1.62
AC004039.1-204ENST00000628061 PUF60Q9UHX1 559 aaKnown RBP4.93□□□□□ -1.62
AC004039.1-204ENST00000628061 NUB1Q9Y5A7 615 aa4.93□□□□□ -1.62
AC004039.1-204ENST00000628061 ACOT7O00154 380 aa4.92□□□□□ -1.62
AC004039.1-204ENST00000628061 SSBP05455 408 aaKnown RBP eCLIP4.92□□□□□ -1.62
AC004039.1-204ENST00000628061 ETV4P43268 484 aa4.92□□□□□ -1.62
AC004039.1-204ENST00000628061 CCDC142Q17RM4 750 aa4.92□□□□□ -1.62
AC004039.1-204ENST00000628061 TNNI3KQ59H18 835 aa4.92□□□□□ -1.62
AC004039.1-204ENST00000628061 C6orf15Q6UXA7 325 aaPredicted RBP4.92□□□□□ -1.62
AC004039.1-204ENST00000628061 SGMS1Q86VZ5 419 aa4.92□□□□□ -1.62
AC004039.1-204ENST00000628061 TMPRSS6Q8IU80 811 aa4.92□□□□□ -1.62
AC004039.1-204ENST00000628061 MICAL1Q8TDZ2 1067 aa4.92□□□□□ -1.62
AC004039.1-204ENST00000628061 CFHR4Q92496 578 aa4.92□□□□□ -1.62
AC004039.1-204ENST00000628061 CAPN10Q9HC96 672 aa4.92□□□□□ -1.62
AC004039.1-204ENST00000628061 SLC39A2Q9NP94 309 aa4.92□□□□□ -1.62
AC004039.1-204ENST00000628061 GPR27Q9NS67 375 aa4.92□□□□□ -1.62
AC004039.1-204ENST00000628061 PARPBPQ9NWS1 579 aa4.92□□□□□ -1.62
AC004039.1-204ENST00000628061 GIT1Q9Y2X7 761 aa4.92□□□□□ -1.62
AC004039.1-204ENST00000628061 SMAD7O15105 426 aaKnown RBP4.91□□□□□ -1.62
AC004039.1-204ENST00000628061 NKRFO15226 690 aaKnown RBP eCLIP4.91□□□□□ -1.62
AC004039.1-204ENST00000628061 FBLP22087 321 aaKnown RBP4.91□□□□□ -1.62
AC004039.1-204ENST00000628061 DPP8Q6V1X1 898 aaPredicted RBP4.91□□□□□ -1.62
AC004039.1-204ENST00000628061 VPS37DQ86XT2 251 aa4.91□□□□□ -1.62
AC004039.1-204ENST00000628061 FAM178BQ8IXR5 827 aa4.91□□□□□ -1.62
AC004039.1-204ENST00000628061 MSL2Q9HCI7 577 aa4.91□□□□□ -1.62
AC004039.1-204ENST00000628061 HECAQ9UBI9 543 aaPredicted RBP4.91□□□□□ -1.62
AC004039.1-204ENST00000628061 MRVI1Q9Y6F6 885 aa4.91□□□□□ -1.62
AC004039.1-204ENST00000628061 KRTAP23-1A1A580 65 aa4.9□□□□□ -1.63
AC004039.1-204ENST00000628061 SUSD5O60279 629 aa4.9□□□□□ -1.63
AC004039.1-204ENST00000628061 CAPNS1P04632 268 aa4.9□□□□□ -1.63
AC004039.1-204ENST00000628061 PDE6AP16499 860 aa4.9□□□□□ -1.63
AC004039.1-204ENST00000628061 EPHA5P54756 1037 aa4.9□□□□□ -1.63
AC004039.1-204ENST00000628061 HHEXQ03014 270 aa4.9□□□□□ -1.63
AC004039.1-204ENST00000628061 SPIRE1Q08AE8 756 aa4.9□□□□□ -1.63
AC004039.1-204ENST00000628061 LAIR1Q6GTX8 287 aa4.9□□□□□ -1.63
AC004039.1-204ENST00000628061 LARP4Q71RC2 724 aaKnown RBP eCLIP4.9□□□□□ -1.63
AC004039.1-204ENST00000628061 RPUSD2Q8IZ73 545 aaKnown RBP4.9□□□□□ -1.63
AC004039.1-204ENST00000628061 THEMISQ8N1K5 641 aaPredicted RBP4.9□□□□□ -1.63
AC004039.1-204ENST00000628061 ZDHHC5Q9C0B5 715 aa4.9□□□□□ -1.63
AC004039.1-204ENST00000628061 KIAA1683Q9H0B3 1180 aa4.9□□□□□ -1.63
AC004039.1-204ENST00000628061 DSEQ9UL01 958 aa4.9□□□□□ -1.63
AC004039.1-204ENST00000628061 TMEM191CA6NGB0 347 aa4.89□□□□□ -1.63
AC004039.1-204ENST00000628061 B2RBV5 119 aa4.89□□□□□ -1.63
AC004039.1-204ENST00000628061 DDAH1O94760 285 aa4.89□□□□□ -1.63
AC004039.1-204ENST00000628061 PEX11BO96011 259 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms