RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 SHANK3Q9BYB0 1731 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 MUSKO15146 869 aa10□□□□□ -0.81
USB1-216ENST00000624720 PDE1BQ01064 536 aa10□□□□□ -0.81
USB1-216ENST00000624720 SULT2A1Q06520 285 aa10□□□□□ -0.81
USB1-216ENST00000624720 PTPROQ16827 1216 aa10□□□□□ -0.81
USB1-216ENST00000624720 TWF2Q6IBS0 349 aaKnown RBP10□□□□□ -0.81
USB1-216ENST00000624720 CELF1Q92879 486 aaKnown RBP10□□□□□ -0.81
USB1-216ENST00000624720 SH3KBP1Q96B97 665 aa10□□□□□ -0.81
USB1-216ENST00000624720 SETDB2Q96T68 719 aa10□□□□□ -0.81
USB1-216ENST00000624720 LSG1Q9H089 658 aaKnown RBP10□□□□□ -0.81
USB1-216ENST00000624720 KAT14Q9H8E8 782 aa10□□□□□ -0.81
USB1-216ENST00000624720 ACTR5Q9H9F9 607 aaPredicted RBP10□□□□□ -0.81
USB1-216ENST00000624720 FANCFQ9NPI8 374 aa10□□□□□ -0.81
USB1-216ENST00000624720 TFCP2L1Q9NZI6 479 aa10□□□□□ -0.81
USB1-216ENST00000624720 TSC22D4Q9Y3Q8 395 aa10□□□□□ -0.81
USB1-216ENST00000624720 WDR46O15213 610 aaKnown RBP10□□□□□ -0.81
USB1-216ENST00000624720 RNASEH2AO75792 299 aaKnown RBP10□□□□□ -0.81
USB1-216ENST00000624720 PRKACBP22694 351 aa10□□□□□ -0.81
USB1-216ENST00000624720 ANXA13P27216 316 aa10□□□□□ -0.81
USB1-216ENST00000624720 GYG1P46976 350 aa10□□□□□ -0.81
USB1-216ENST00000624720 NLRP12P59046 1061 aa10□□□□□ -0.81
USB1-216ENST00000624720 DR1Q01658 176 aa10□□□□□ -0.81
USB1-216ENST00000624720 GBE1Q04446 702 aa10□□□□□ -0.81
USB1-216ENST00000624720 IKQ13123 557 aaPredicted RBP10□□□□□ -0.81
USB1-216ENST00000624720 ACAP1Q15027 740 aa10□□□□□ -0.81
USB1-216ENST00000624720 PDXDC1Q6P996 788 aa10□□□□□ -0.81
USB1-216ENST00000624720 CASP10Q92851 521 aa10□□□□□ -0.81
USB1-216ENST00000624720 PRPF18Q99633 342 aaKnown RBP10□□□□□ -0.81
USB1-216ENST00000624720 FAM167BQ9BTA0 163 aa10□□□□□ -0.81
USB1-216ENST00000624720 POLMQ9NP87 494 aaPredicted RBP10□□□□□ -0.81
USB1-216ENST00000624720 PCDHB2Q9Y5E7 798 aa10□□□□□ -0.81
USB1-216ENST00000624720 SPDYE5A6NIY4 337 aa10□□□□□ -0.81
USB1-216ENST00000624720 A6NJR5 290 aa10□□□□□ -0.81
USB1-216ENST00000624720 SPDYE16A6NNV3 312 aaPredicted RBP10□□□□□ -0.81
USB1-216ENST00000624720 M0QX08 132 aa10□□□□□ -0.81
USB1-216ENST00000624720 ASAP2O43150 1006 aa10□□□□□ -0.81
USB1-216ENST00000624720 USO1O60763 962 aaKnown RBP10□□□□□ -0.81
USB1-216ENST00000624720 FLOT1O75955 427 aa10□□□□□ -0.81
USB1-216ENST00000624720 STAMBPO95630 424 aa10□□□□□ -0.81
USB1-216ENST00000624720 APOEP02649 317 aa10□□□□□ -0.81
USB1-216ENST00000624720 KLRK1P26718 216 aa10□□□□□ -0.81
USB1-216ENST00000624720 SIM2Q14190 667 aaPredicted RBP10□□□□□ -0.81
USB1-216ENST00000624720 C6orf183Q5T699 404 aa10□□□□□ -0.81
USB1-216ENST00000624720 CCHCR1Q8TD31 782 aa10□□□□□ -0.81
USB1-216ENST00000624720 BEGAINQ9BUH8 593 aa10□□□□□ -0.81
USB1-216ENST00000624720 CCSER1Q9C0I3 900 aa10□□□□□ -0.81
USB1-216ENST00000624720 NOD2Q9HC29 1040 aa10□□□□□ -0.81
USB1-216ENST00000624720 NOP53Q9NZM5 478 aaKnown RBP10□□□□□ -0.81
USB1-216ENST00000624720 HEY1Q9Y5J3 304 aa10□□□□□ -0.81
USB1-216ENST00000624720 DOT1LQ8TEK3 1739 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 ADAMTS7Q9UKP4 1686 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 PRSS47A8MTI9 375 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 AP3B1O00203 1094 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 EIF3HO15372 352 aaKnown RBP eCLIP9.99□□□□□ -0.81
USB1-216ENST00000624720 BIRC5O15392 142 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 RASA4O43374 803 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 B4GALT4O60513 344 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 ETFBP38117 255 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 ZNF75DP51815 510 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 HSD17B7P56937 341 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 PDAP1Q13442 181 aaKnown RBP9.99□□□□□ -0.81
USB1-216ENST00000624720 LAPTM5Q13571 262 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 COG2Q14746 738 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 NXNQ6DKJ4 435 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 CNKSR1Q969H4 720 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 FGD4Q96M96 766 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 GOLPH3LQ9H4A5 285 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 PLCB1Q9NQ66 1216 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 ATPIF1Q9UII2 106 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 L1RE1Q9UN81 338 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 CHMP2BQ9UQN3 213 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 A0A1B0GVL5 298 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 URI1O94763 535 aaPredicted RBP9.99□□□□□ -0.81
USB1-216ENST00000624720 LARGE1O95461 756 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 NTSR2O95665 410 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 APBA3O96018 575 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 ALDH2P05091 517 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 MCAMP43121 646 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 TUBA4AP68366 448 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 NEK5Q6P3R8 708 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 Q6ZUG5 572 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 DQX1Q8TE96 717 aaKnown RBP9.99□□□□□ -0.81
USB1-216ENST00000624720 RUFY2Q8WXA3 655 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 SMC6Q96SB8 1091 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 SIKE1Q9BRV8 207 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 B3GNT4Q9C0J1 378 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 ITIH6Q6UXX5 1313 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 THSD7AQ9UPZ6 1657 aa9.99□□□□□ -0.81
USB1-216ENST00000624720 ONECUT3O60422 494 aaPredicted RBP9.98□□□□□ -0.81
USB1-216ENST00000624720 CD9P21926 228 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 IGHMBP2P38935 993 aaKnown RBP9.98□□□□□ -0.81
USB1-216ENST00000624720 TXLNAP40222 546 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 SNX16P57768 344 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 MRPS35P82673 323 aaKnown RBP9.98□□□□□ -0.81
USB1-216ENST00000624720 TRAPPC3LQ5T215 181 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 BAIAP2L1Q9UHR4 511 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 MAP3K13O43283 966 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 MAP3K7O43318 606 aa9.98□□□□□ -0.81
USB1-216ENST00000624720 HNRNPRO43390 633 aaKnown RBP9.98□□□□□ -0.81
USB1-216ENST00000624720 LCA5LO95447 670 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms