RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 MSH2P43246 934 aa6.09□□□□□ -1.43
ERCC6-213ENST00000624341 YARSP54577 528 aaKnown RBP6.09□□□□□ -1.43
ERCC6-213ENST00000624341 PRKG1Q13976 671 aa6.09□□□□□ -1.43
ERCC6-213ENST00000624341 UBE2SQ16763 222 aa6.09□□□□□ -1.43
ERCC6-213ENST00000624341 AOC3Q16853 763 aa6.09□□□□□ -1.43
ERCC6-213ENST00000624341 KRT26Q7Z3Y9 468 aa6.09□□□□□ -1.43
ERCC6-213ENST00000624341 SCYL1Q96KG9 808 aa6.09□□□□□ -1.43
ERCC6-213ENST00000624341 VCX3AQ9NNX9 186 aa6.09□□□□□ -1.43
ERCC6-213ENST00000624341 PICK1Q9NRD5 415 aa6.09□□□□□ -1.43
ERCC6-213ENST00000624341 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.09□□□□□ -1.43
ERCC6-213ENST00000624341 PACSIN2Q9UNF0 486 aaPredicted RBP6.09□□□□□ -1.43
ERCC6-213ENST00000624341 ABCA3Q99758 1704 aa6.09□□□□□ -1.43
ERCC6-213ENST00000624341 TTC36A6NLP5 189 aa6.09□□□□□ -1.44
ERCC6-213ENST00000624341 HNRNPDLO14979 420 aaKnown RBP6.09□□□□□ -1.44
ERCC6-213ENST00000624341 SKIP12755 728 aa6.09□□□□□ -1.44
ERCC6-213ENST00000624341 MX2P20592 715 aa6.09□□□□□ -1.44
ERCC6-213ENST00000624341 GUCY1A3Q02108 690 aa6.09□□□□□ -1.44
ERCC6-213ENST00000624341 GLE1Q53GS7 698 aaKnown RBP6.09□□□□□ -1.44
ERCC6-213ENST00000624341 TMTC3Q6ZXV5 915 aa6.09□□□□□ -1.44
ERCC6-213ENST00000624341 AMNQ9BXJ7 453 aa6.09□□□□□ -1.44
ERCC6-213ENST00000624341 PITPNM3Q9BZ71 974 aa6.09□□□□□ -1.44
ERCC6-213ENST00000624341 SUGCTQ9HAC7 445 aa6.09□□□□□ -1.44
ERCC6-213ENST00000624341 IFT122Q9HBG6 1241 aa6.09□□□□□ -1.44
ERCC6-213ENST00000624341 ATG3Q9NT62 314 aa6.09□□□□□ -1.44
ERCC6-213ENST00000624341 SEPT10Q9P0V9 454 aa6.09□□□□□ -1.44
ERCC6-213ENST00000624341 ANKFY1Q9P2R3 1169 aa6.09□□□□□ -1.44
ERCC6-213ENST00000624341 ZNF804BA4D1E1 1349 aa6.09□□□□□ -1.44
ERCC6-213ENST00000624341 LRRIQ4A6NIV6 560 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 SFI1A8K8P3 1242 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 CCDC188H7C350 402 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 TRPA1O75762 1119 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 HSPA6P17066 643 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 LMNB2Q03252 620 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 RNASELQ05823 741 aaKnown RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 LRRC63Q05C16 580 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 VPS72Q15906 364 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 NLRP14Q86W24 1093 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 DCLK2Q8N568 766 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 ZNF579Q8NAF0 562 aaKnown RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 GABPB2Q8TAK5 448 aaPredicted RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 HVCN1Q96D96 273 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 MMS19Q96T76 1030 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 CYTH2Q99418 400 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 CPVLQ9H3G5 476 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 PCDHB4Q9Y5E5 795 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 NEDD4P46934 1319 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 SLIT2O94813 1529 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 SPECC1L-ADORA2AF8WAN1 911 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 GOLGA8SH3BPF8 625 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 MT-ND3P03897 115 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 ESRRAP11474 423 aaPredicted RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 POLR2BP30876 1174 aaKnown RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 ADCY2Q08462 1091 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 MYO1EQ12965 1108 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 DOK7Q18PE1 504 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 STOX1Q6ZVD7 989 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 METTL16Q86W50 562 aaKnown RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 KCNV2Q8TDN2 545 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 CHP1Q99653 195 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 FAM167BQ9BTA0 163 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 CPSF1Q10570 1443 aaKnown RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 PP2D1A8MPX8 630 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 ZNF185O15231 689 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 ZBTB24O43167 697 aaPredicted RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 FOSP01100 380 aaPredicted RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 CHGBP05060 677 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 BASP1P80723 227 aaKnown RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 ASPHQ12797 758 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 DMP1Q13316 513 aaPredicted RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 BBS9Q3SYG4 887 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 C10orf76Q5T2E6 689 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 TRIM50Q86XT4 487 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 RFX6Q8HWS3 928 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 MB21D2Q8IYB1 491 aaPredicted RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 SH2D3CQ8N5H7 860 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 YIPF3Q9GZM5 350 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 SMYD2Q9NRG4 433 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 G3BP2Q9UN86 482 aaKnown RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 GJA3Q9Y6H8 435 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 PIK3CAP42336 1068 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 SH3BGRP55822 239 aaPredicted RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 BPIFB4P59827 614 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 YWHAEP62258 255 aaKnown RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 MMEL1Q495T6 779 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 FBXW10Q5XX13 1052 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 NLRP10Q86W26 655 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 METTL13Q8N6R0 699 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 LRRC1Q9BTT6 524 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 TMOD4Q9NZQ9 345 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 CLEC11AQ9Y240 323 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 MRPL11Q9Y3B7 192 aaKnown RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 SYNJ2BP-COX16A0A087WUM0 186 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 POTEMA6NI47 508 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 H7C1W4 665 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 CTIFO43310 598 aaKnown RBP6.08□□□□□ -1.44
ERCC6-213ENST00000624341 GPC4O75487 556 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 TMEM191BP0C7N4 346 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 PSMD2Q13200 908 aa6.08□□□□□ -1.44
ERCC6-213ENST00000624341 ZNF211Q13398 564 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms