RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 CCT8L1PA6NM43 557 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 RAD51CO43502 376 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 CHMP2AO43633 222 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 DCTN3O75935 186 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 FSBPO95073 299 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 CSF1RP07333 972 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 NAB2Q15742 525 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 SGO2Q562F6 1265 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 USP38Q8NB14 1042 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 SYN2Q92777 582 aaPredicted RBP12.8□□□□□ -0.36
ATRX-214ENST00000624166 AZI2Q9H6S1 392 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 ASAP1Q9ULH1 1129 aa12.8□□□□□ -0.36
ATRX-214ENST00000624166 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.8□□□□□ -0.36
ATRX-214ENST00000624166 CHRNA3P32297 505 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 RFC4P35249 363 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 STK4Q13043 487 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 MKRN3Q13064 507 aaKnown RBP12.79□□□□□ -0.36
ATRX-214ENST00000624166 CNPY4Q8N129 248 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 SH3GL3Q99963 347 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 EPB41L4AQ9HCS5 686 aaPredicted RBP12.79□□□□□ -0.36
ATRX-214ENST00000624166 BARHL2Q9NY43 387 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 AMACRQ9UHK6 382 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 PREX1Q8TCU6 1659 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 F8W031 263 aaPredicted RBP12.79□□□□□ -0.36
ATRX-214ENST00000624166 MYL7Q01449 175 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 RDH13Q8NBN7 331 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 GRAMD1AQ96CP6 724 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 THOC1Q96FV9 657 aaKnown RBP12.79□□□□□ -0.36
ATRX-214ENST00000624166 PIGSQ96S52 555 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 PITPNM3Q9BZ71 974 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 SMARCAL1Q9NZC9 954 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 ABCB11O95342 1321 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 HMGB2P26583 209 aaKnown RBP12.79□□□□□ -0.36
ATRX-214ENST00000624166 PRR16Q569H4 304 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 TSNARE1Q96NA8 513 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 ECT2Q9H8V3 914 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 ANAPC5Q9UJX4 755 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 AGTPBP1Q9UPW5 1226 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 SETD1BQ9UPS6 1966 aaKnown RBP12.79□□□□□ -0.36
ATRX-214ENST00000624166 BMP6P22004 513 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 GRM4Q14833 912 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 YTHDF3Q7Z739 585 aaKnown RBP12.79□□□□□ -0.36
ATRX-214ENST00000624166 TBC1D22AQ8WUA7 517 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 CAPN6Q9Y6Q1 641 aa12.79□□□□□ -0.36
ATRX-214ENST00000624166 FRMPD2Q68DX3 1309 aaPredicted RBP12.79□□□□□ -0.36
ATRX-214ENST00000624166 PHF20L1A8MW92 1017 aa12.78□□□□□ -0.36
ATRX-214ENST00000624166 CPP00450 1065 aa12.78□□□□□ -0.36
ATRX-214ENST00000624166 COASYQ13057 564 aa12.78□□□□□ -0.36
ATRX-214ENST00000624166 GPATCH4Q5T3I0 446 aaKnown RBP12.78□□□□□ -0.36
ATRX-214ENST00000624166 TPH2Q8IWU9 490 aa12.78□□□□□ -0.36
ATRX-214ENST00000624166 UIMC1Q96RL1 719 aa12.78□□□□□ -0.36
ATRX-214ENST00000624166 FNBP1Q96RU3 617 aa12.78□□□□□ -0.36
ATRX-214ENST00000624166 POLD4Q9HCU8 107 aa12.78□□□□□ -0.36
ATRX-214ENST00000624166 RABGAP1Q9Y3P9 1069 aa12.78□□□□□ -0.36
ATRX-214ENST00000624166 FOSP01100 380 aaPredicted RBP12.78□□□□□ -0.36
ATRX-214ENST00000624166 CCND1P24385 295 aa12.78□□□□□ -0.36
ATRX-214ENST00000624166 PABPC4Q13310 644 aaKnown RBP eCLIP12.78□□□□□ -0.36
ATRX-214ENST00000624166 COL9A3Q14050 684 aaPredicted RBP12.78□□□□□ -0.36
ATRX-214ENST00000624166 DUSP10Q9Y6W6 482 aa12.78□□□□□ -0.36
ATRX-214ENST00000624166 JCADQ9P266 1359 aa12.78□□□□□ -0.36
ATRX-214ENST00000624166 KIF3CO14782 793 aa12.78□□□□□ -0.36
ATRX-214ENST00000624166 TMOD1P28289 359 aa12.78□□□□□ -0.36
ATRX-214ENST00000624166 CFAP57Q96MR6 1250 aa12.78□□□□□ -0.36
ATRX-214ENST00000624166 CDCA7Q9BWT1 371 aaPredicted RBP12.78□□□□□ -0.36
ATRX-214ENST00000624166 TMBIM4Q9HC24 238 aa12.78□□□□□ -0.36
ATRX-214ENST00000624166 STOML1Q9UBI4 398 aa12.78□□□□□ -0.36
ATRX-214ENST00000624166 COL15A1P39059 1388 aa12.77□□□□□ -0.36
ATRX-214ENST00000624166 HSD17B3P37058 310 aa12.77□□□□□ -0.36
ATRX-214ENST00000624166 NAALADL2Q58DX5 795 aa12.77□□□□□ -0.36
ATRX-214ENST00000624166 TTI2Q6NXR4 508 aa12.77□□□□□ -0.36
ATRX-214ENST00000624166 ZNF662Q6ZS27 426 aa12.77□□□□□ -0.36
ATRX-214ENST00000624166 TRPM8Q7Z2W7 1104 aa12.77□□□□□ -0.36
ATRX-214ENST00000624166 GDAP1Q8TB36 358 aa12.77□□□□□ -0.36
ATRX-214ENST00000624166 ANKS1AQ92625 1134 aa12.77□□□□□ -0.36
ATRX-214ENST00000624166 TPX2Q9ULW0 747 aaKnown RBP12.77□□□□□ -0.36
ATRX-214ENST00000624166 IFT172Q9UG01 1749 aa12.77□□□□□ -0.36
ATRX-214ENST00000624166 SRRM3A6NNA2 597 aaPredicted RBP12.77□□□□□ -0.37
ATRX-214ENST00000624166 NR1H3Q13133 447 aa12.77□□□□□ -0.37
ATRX-214ENST00000624166 PDXDC2PQ6P474 469 aa12.77□□□□□ -0.37
ATRX-214ENST00000624166 YIPF3Q9GZM5 350 aa12.77□□□□□ -0.37
ATRX-214ENST00000624166 DNAI2Q9GZS0 605 aa12.77□□□□□ -0.37
ATRX-214ENST00000624166 USTQ9Y2C2 406 aa12.77□□□□□ -0.37
ATRX-214ENST00000624166 USP17L8P0C7I0 530 aa12.77□□□□□ -0.37
ATRX-214ENST00000624166 CHN1P15882 459 aa12.77□□□□□ -0.37
ATRX-214ENST00000624166 KLK7P49862 253 aa12.77□□□□□ -0.37
ATRX-214ENST00000624166 CACNB1Q02641 598 aaPredicted RBP12.77□□□□□ -0.37
ATRX-214ENST00000624166 CAV1Q03135 178 aa12.77□□□□□ -0.37
ATRX-214ENST00000624166 CFAP61Q8NHU2 1237 aa12.77□□□□□ -0.37
ATRX-214ENST00000624166 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.77□□□□□ -0.37
ATRX-214ENST00000624166 CASKIN2Q8WXE0 1202 aa12.77□□□□□ -0.37
ATRX-214ENST00000624166 RFFLQ8WZ73 363 aa12.77□□□□□ -0.37
ATRX-214ENST00000624166 NOD2Q9HC29 1040 aa12.77□□□□□ -0.37
ATRX-214ENST00000624166 GGA2Q9UJY4 613 aa12.77□□□□□ -0.37
ATRX-214ENST00000624166 PCDHA6Q9UN73 950 aa12.77□□□□□ -0.37
ATRX-214ENST00000624166 ARL2BPQ9Y2Y0 163 aa12.77□□□□□ -0.37
ATRX-214ENST00000624166 PCDHA8Q9Y5H6 950 aa12.77□□□□□ -0.37
ATRX-214ENST00000624166 TFRCP02786 760 aaKnown RBP12.76□□□□□ -0.37
ATRX-214ENST00000624166 SETSIPP0DME0 302 aa12.76□□□□□ -0.37
ATRX-214ENST00000624166 USP11P51784 963 aa12.76□□□□□ -0.37
ATRX-214ENST00000624166 MECOMQ03112 1051 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms