RNA–Protein interactions for RNA: ENST00000622963.3

SNHG5-213, Transcript of small nucleolar RNA host gene 5, human

TSL 5 BASIC

Gene SNHG5, Length 753 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG5-213	ENST00000622963	PLAGL2	Q9UPG8	496 aa		13.64	□□□□□ -0.23
SNHG5-213	ENST00000622963	PCDHGA10	Q9Y5H3	936 aa		13.64	□□□□□ -0.23
SNHG5-213	ENST00000622963	MYH7B	A7E2Y1	1941 aa		13.64	□□□□□ -0.23
SNHG5-213	ENST00000622963	NEDD4	P46934	1319 aa		13.64	□□□□□ -0.23
SNHG5-213	ENST00000622963	TTC41P	Q6P2S7	1318 aa		13.64	□□□□□ -0.23
SNHG5-213	ENST00000622963		A0A0D9SFI3	127 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963		H0Y858	1186 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963		H3BRB1	525 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	PPP1R11	O60927	126 aa	Predicted RBP	13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	CFB	P00751	764 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	CHRNA1	P02708	482 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	ITGB1	P05556	798 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	MS4A1	P11836	297 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	MYCL	P12524	364 aa	Predicted RBP	13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	AVPR2	P30518	371 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	HSD17B4	P51659	736 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	ADAM17	P78536	824 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	SIGLEC14	Q08ET2	396 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	FAM26D	Q5JW98	314 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	GPATCH4	Q5T3I0	446 aa	Known RBP	13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	RUFY4	Q6ZNE9	571 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	VN1R2	Q8NFZ6	395 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	FAM227B	Q96M60	508 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	PRRX2	Q99811	253 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	TUT1	Q9H6E5	874 aa	Known RBP	13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	JMJD4	Q9H9V9	463 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	TLR9	Q9NR96	1032 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	MRPL42	Q9Y6G3	142 aa	Known RBP	13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	GVINP1	Q7Z2Y8	2422 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	SALL3	Q9BXA9	1300 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	FAM186A	A6NE01	2351 aa		13.63	□□□□□ -0.23
SNHG5-213	ENST00000622963	VPS13A	Q96RL7	3174 aa		13.62	□□□□□ -0.23
SNHG5-213	ENST00000622963	CAND2	O75155	1236 aa		13.62	□□□□□ -0.23
SNHG5-213	ENST00000622963	GHRHR	Q02643	423 aa		13.62	□□□□□ -0.23
SNHG5-213	ENST00000622963	MGAT3	Q09327	533 aa		13.62	□□□□□ -0.23
SNHG5-213	ENST00000622963	COASY	Q13057	564 aa		13.62	□□□□□ -0.23
SNHG5-213	ENST00000622963	SEMA3F	Q13275	785 aa		13.62	□□□□□ -0.23
SNHG5-213	ENST00000622963	PGM5	Q15124	567 aa		13.62	□□□□□ -0.23
SNHG5-213	ENST00000622963	EFHB	Q8N7U6	833 aa		13.62	□□□□□ -0.23
SNHG5-213	ENST00000622963	SPPL3	Q8TCT6	385 aa		13.62	□□□□□ -0.23
SNHG5-213	ENST00000622963	ATOH1	Q92858	354 aa	Predicted RBP	13.62	□□□□□ -0.23
SNHG5-213	ENST00000622963	RPGRIP1	Q96KN7	1286 aa		13.62	□□□□□ -0.23
SNHG5-213	ENST00000622963	TTC14	Q96N46	770 aa		13.62	□□□□□ -0.23
SNHG5-213	ENST00000622963	KIAA1671	Q9BY89	1806 aa		13.62	□□□□□ -0.23
SNHG5-213	ENST00000622963	ENPP3	O14638	875 aa		13.61	□□□□□ -0.23
SNHG5-213	ENST00000622963	HSPD1	P10809	573 aa	Known RBP	13.61	□□□□□ -0.23
SNHG5-213	ENST00000622963	HOXA13	P31271	388 aa	Predicted RBP	13.61	□□□□□ -0.23
SNHG5-213	ENST00000622963	NRIP1	P48552	1158 aa		13.61	□□□□□ -0.23
SNHG5-213	ENST00000622963	BTG3	Q14201	252 aa	Predicted RBP	13.61	□□□□□ -0.23
SNHG5-213	ENST00000622963	LPIN1	Q14693	890 aa		13.61	□□□□□ -0.23
SNHG5-213	ENST00000622963	PKN1	Q16512	942 aa		13.61	□□□□□ -0.23
SNHG5-213	ENST00000622963	SLC35G1	Q2M3R5	365 aa		13.61	□□□□□ -0.23
SNHG5-213	ENST00000622963	RBM23	Q86U06	439 aa	Known RBP	13.61	□□□□□ -0.23
SNHG5-213	ENST00000622963	VSIG10L	Q86VR7	867 aa		13.61	□□□□□ -0.23
SNHG5-213	ENST00000622963	MCF2L2	Q86YR7	1114 aa		13.61	□□□□□ -0.23
SNHG5-213	ENST00000622963	LMBR1	Q8WVP7	490 aa		13.61	□□□□□ -0.23
SNHG5-213	ENST00000622963	APBB2	Q92870	758 aa		13.61	□□□□□ -0.23
SNHG5-213	ENST00000622963	MAF1	Q9H063	256 aa		13.61	□□□□□ -0.23
SNHG5-213	ENST00000622963	EHMT1	Q9H9B1	1298 aa		13.61	□□□□□ -0.23
SNHG5-213	ENST00000622963	VAT1L	Q9HCJ6	419 aa		13.61	□□□□□ -0.23
SNHG5-213	ENST00000622963	MRPL11	Q9Y3B7	192 aa	Known RBP	13.61	□□□□□ -0.23
SNHG5-213	ENST00000622963	PRR23A	A6NEV1	266 aa		13.6	□□□□□ -0.23
SNHG5-213	ENST00000622963	PROB1	E7EW31	1015 aa		13.6	□□□□□ -0.23
SNHG5-213	ENST00000622963	DGKI	O75912	1065 aa		13.6	□□□□□ -0.23
SNHG5-213	ENST00000622963	AR	P10275	920 aa		13.6	□□□□□ -0.23
SNHG5-213	ENST00000622963	GATM	P50440	423 aa		13.6	□□□□□ -0.23
SNHG5-213	ENST00000622963	PROX2	Q3B8N5	592 aa		13.6	□□□□□ -0.23
SNHG5-213	ENST00000622963	TYW1B	Q6NUM6	668 aa		13.6	□□□□□ -0.23
SNHG5-213	ENST00000622963	STOX1	Q6ZVD7	989 aa		13.6	□□□□□ -0.23
SNHG5-213	ENST00000622963	CRIPAK	Q8N1N5	446 aa		13.6	□□□□□ -0.23
SNHG5-213	ENST00000622963	KLHL23	Q8NBE8	558 aa		13.6	□□□□□ -0.23
SNHG5-213	ENST00000622963	PNMA1	Q8ND90	353 aa		13.6	□□□□□ -0.23
SNHG5-213	ENST00000622963	POF1B	Q8WVV4	589 aa		13.6	□□□□□ -0.23
SNHG5-213	ENST00000622963	SUSD6	Q92537	303 aa		13.6	□□□□□ -0.23
SNHG5-213	ENST00000622963	PHF7	Q9BWX1	381 aa	Predicted RBP	13.6	□□□□□ -0.23
SNHG5-213	ENST00000622963	RWDD3	Q9Y3V2	267 aa		13.6	□□□□□ -0.23
SNHG5-213	ENST00000622963	CCDC171	Q6TFL3	1326 aa		13.6	□□□□□ -0.23
SNHG5-213	ENST00000622963	TTC3	P53804	2025 aa		13.59	□□□□□ -0.23
SNHG5-213	ENST00000622963	PER2	O15055	1255 aa		13.59	□□□□□ -0.23
SNHG5-213	ENST00000622963	ICAM3	P32942	547 aa		13.59	□□□□□ -0.23
SNHG5-213	ENST00000622963	ARHGAP4	P98171	946 aa		13.59	□□□□□ -0.23
SNHG5-213	ENST00000622963	FOXK2	Q01167	660 aa		13.59	□□□□□ -0.23
SNHG5-213	ENST00000622963	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.59	□□□□□ -0.23
SNHG5-213	ENST00000622963	STAG2	Q8N3U4	1231 aa		13.59	□□□□□ -0.23
SNHG5-213	ENST00000622963	P2RX5	Q93086	422 aa		13.59	□□□□□ -0.23
SNHG5-213	ENST00000622963	ZBTB10	Q96DT7	871 aa		13.59	□□□□□ -0.23
SNHG5-213	ENST00000622963	GPR20	Q99678	358 aa		13.59	□□□□□ -0.23
SNHG5-213	ENST00000622963	PLVAP	Q9BX97	442 aa		13.59	□□□□□ -0.23
SNHG5-213	ENST00000622963	AGO3	Q9H9G7	860 aa	Known RBP	13.59	□□□□□ -0.23
SNHG5-213	ENST00000622963	MLXIP	Q9HAP2	919 aa		13.59	□□□□□ -0.23
SNHG5-213	ENST00000622963	CDH22	Q9UJ99	828 aa		13.59	□□□□□ -0.23
SNHG5-213	ENST00000622963	ZMYM6	O95789	1325 aa		13.59	□□□□□ -0.23
SNHG5-213	ENST00000622963	MX1	P20591	662 aa		13.58	□□□□□ -0.24
SNHG5-213	ENST00000622963	SP100	P23497	879 aa	Predicted RBP	13.58	□□□□□ -0.24
SNHG5-213	ENST00000622963	PTPN21	Q16825	1174 aa		13.58	□□□□□ -0.24
SNHG5-213	ENST00000622963	PAN2	Q504Q3	1202 aa	Known RBP	13.58	□□□□□ -0.24
SNHG5-213	ENST00000622963	UTP14C	Q5TAP6	766 aa	Known RBP	13.58	□□□□□ -0.24
SNHG5-213	ENST00000622963	DGKH	Q86XP1	1220 aa		13.58	□□□□□ -0.24
SNHG5-213	ENST00000622963	SMOC2	Q9H3U7	446 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms