RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 KCTD17Q8N5Z5 321 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 TRIML1Q8N9V2 468 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 GIMAP8Q8ND71 665 aaPredicted RBP11.91□□□□□ -0.5
CPNE3-212ENST00000621783 APBA2Q99767 749 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 C7orf25Q9BPX7 421 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 TINF2Q9BSI4 451 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 CFHR5Q9BXR6 569 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 ARHGAP39Q9C0H5 1083 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 RBSNQ9H1K0 784 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 DNAJC25Q9H1X3 360 aa11.91□□□□□ -0.5
CPNE3-212ENST00000621783 DDX41Q9UJV9 622 aaKnown RBP11.91□□□□□ -0.5
CPNE3-212ENST00000621783 MYMKA6NI61 221 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 KLRC4O43908 158 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 EYA4O95677 639 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 RPN1P04843 607 aaKnown RBP11.9□□□□□ -0.5
CPNE3-212ENST00000621783 SSBP05455 408 aaKnown RBP eCLIP11.9□□□□□ -0.5
CPNE3-212ENST00000621783 P4HBP07237 508 aaKnown RBP11.9□□□□□ -0.5
CPNE3-212ENST00000621783 SUPT20HL2P0C7V6 817 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 QARSP47897 775 aaKnown RBP11.9□□□□□ -0.5
CPNE3-212ENST00000621783 SLC12A3P55017 1021 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 ASIC1P78348 528 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 MORC3Q14149 939 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 NEDD9Q14511 834 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 TTLL4Q14679 1199 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 LY6KQ17RY6 165 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 TAPT1Q6NXT6 567 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 METTL7BQ6UX53 244 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 GPBP1Q86WP2 473 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 SCFD2Q8WU76 684 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 TRIM47Q96LD4 638 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 GSDMAQ96QA5 445 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 LRRC27Q9C0I9 530 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 ZSWIM4Q9H7M6 989 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 PDGFCQ9NRA1 345 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 RNF186Q9NXI6 227 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 FLRT1Q9NZU1 646 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 GJD2Q9UKL4 321 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 DNM3Q9UQ16 869 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 PCDHA10Q9Y5I2 948 aa11.9□□□□□ -0.5
CPNE3-212ENST00000621783 IGSF9BQ9UPX0 1349 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 ARID2Q68CP9 1835 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 RBM47A0AV96 593 aaKnown RBP11.89□□□□□ -0.51
CPNE3-212ENST00000621783 LYPLA2O95372 231 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 PSAPP07602 524 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 CYP11B2P19099 503 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 CYP2B6P20813 491 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 BMP6P22004 513 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 PSMC4P43686 418 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 PSMC5P62195 406 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 CCL14Q16627 93 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 CELF3Q5SZQ8 465 aaKnown RBP11.89□□□□□ -0.51
CPNE3-212ENST00000621783 TMEM63BQ5T3F8 832 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 OLFML2BQ68BL8 750 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 MIS18BP1Q6P0N0 1132 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 CNNM4Q6P4Q7 775 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 ABHD15Q6UXT9 468 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 DYMQ7RTS9 669 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 CCDC60Q8IWA6 550 aaPredicted RBP11.89□□□□□ -0.51
CPNE3-212ENST00000621783 SYT2Q8N9I0 419 aaPredicted RBP11.89□□□□□ -0.51
CPNE3-212ENST00000621783 RNF214Q8ND24 703 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 FAM200AQ8TCP9 573 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 PIGOQ8TEQ8 1089 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 DDX12PQ92771 950 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 NACC1Q96RE7 527 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 BHMT2Q9H2M3 363 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 RMND1Q9NWS8 449 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 GABBR1Q9UBS5 961 aa11.89□□□□□ -0.51
CPNE3-212ENST00000621783 ZHX1Q9UKY1 873 aaPredicted RBP11.89□□□□□ -0.51
CPNE3-212ENST00000621783 WDR81Q562E7 1941 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 ZBTB39O15060 712 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 TRPA1O75762 1119 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 ATG7O95352 703 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 TXNP10599 105 aaKnown RBP11.88□□□□□ -0.51
CPNE3-212ENST00000621783 ADCYAP1R1P41586 468 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 CAP1Q01518 475 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 SP3Q02447 781 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 ARHGAP1Q07960 439 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 ACVR2BQ13705 512 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 KCNB1Q14721 858 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 KMT5BQ4FZB7 885 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 UNC13DQ70J99 1090 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 C4orf19Q8IY42 314 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 COPS5Q92905 334 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 ATP6V0A1Q93050 837 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 CCDC47Q96A33 483 aaKnown RBP11.88□□□□□ -0.51
CPNE3-212ENST00000621783 RUSC1Q9BVN2 902 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 ABHD16BQ9H3Z7 469 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 MLXIPQ9HAP2 919 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 GRPEL1Q9HAV7 217 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 CBX8Q9HC52 389 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 EXOC1Q9NV70 894 aa11.88□□□□□ -0.51
CPNE3-212ENST00000621783 CASP8AP2Q9UKL3 1982 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 IGKV6D-21A0A0A0MT36 114 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 NPHP3-ACAD11A0A0J9YXS1 232 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.87□□□□□ -0.51
CPNE3-212ENST00000621783 GSTTP1A0A1W2PQM5 241 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 ARHGEF35A5YM69 484 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 BACH1O14867 736 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 ZNF862O60290 1169 aa11.87□□□□□ -0.51
CPNE3-212ENST00000621783 DKC1O60832 514 aaKnown RBP eCLIP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms