RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 AZI2Q9H6S1 392 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 TPCN1Q9ULQ1 816 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 STK24Q9Y6E0 443 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 GMNCA6NCL1 334 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 DLATP10515 647 aaKnown RBP10.64□□□□□ -0.71
COL4A6-210ENST00000621266 HSPA8P11142 646 aaKnown RBP10.64□□□□□ -0.71
COL4A6-210ENST00000621266 ATP2B4P23634 1241 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 IFRD2Q12894 506 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-210ENST00000621266 TNFAIP1Q13829 316 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 KMT5BQ4FZB7 885 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 TRIM67Q6ZTA4 783 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 DDX42Q86XP3 938 aaKnown RBP eCLIP10.64□□□□□ -0.71
COL4A6-210ENST00000621266 THAP11Q96EK4 314 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 IPO11Q9UI26 975 aaKnown RBP10.64□□□□□ -0.71
COL4A6-210ENST00000621266 STXBP3O00186 592 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 SRGAP2O75044 1071 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 EIF3BP55884 814 aaKnown RBP10.64□□□□□ -0.71
COL4A6-210ENST00000621266 PRPSAP1Q14558 356 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 PPP4R4Q6NUP7 873 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 GIPC2Q8TF65 315 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 SYMPKQ92797 1274 aaKnown RBP10.64□□□□□ -0.71
COL4A6-210ENST00000621266 TRIM55Q9BYV6 548 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 NHEJ1Q9H9Q4 299 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-210ENST00000621266 C1orf112Q9NSG2 853 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 PIM2Q9P1W9 311 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 RIMBP3CA6NJZ7 1639 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 RIMBP3BA6NNM3 1639 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 RIMBP3Q9UFD9 1639 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 CCDC195A0A1B0GUA6 201 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 MAGOHP61326 146 aaKnown RBP10.64□□□□□ -0.71
COL4A6-210ENST00000621266 NAA30Q147X3 362 aaPredicted RBP10.64□□□□□ -0.71
COL4A6-210ENST00000621266 EXOC3L4Q17RC7 722 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 ANO5Q75V66 913 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 PCGF5Q86SE9 256 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 DPP9Q86TI2 863 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 TRIML1Q8N9V2 468 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 SSH3Q8TE77 659 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 MIS12Q9H081 205 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 USP44Q9H0E7 712 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 GINM1Q9NU53 330 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 DCTN4Q9UJW0 460 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 NBPF26B4DH59 902 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 CAPN15O75808 1086 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 ATP5HO75947 161 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 MMP10P09238 476 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 OSBPP22059 807 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 TMOD1P28289 359 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 MAPK4P31152 587 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 ARHGEF16Q5VV41 709 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 BTNL9Q6UXG8 535 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 NBPF15Q8N660 670 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 SLC26A7Q8TE54 656 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 EPC1Q9H2F5 836 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 ETNK1Q9HBU6 452 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 GGT7Q9UJ14 662 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 TLK1Q9UKI8 766 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 SAMD9LQ8IVG5 1584 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 RNF103-CHMP3A0A140T963 221 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 KIF11P52732 1056 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 TMPRSS15P98073 1019 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 ARID5BQ14865 1188 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 TMCO5AQ8N6Q1 288 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 MMS19Q96T76 1030 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 COG4Q9H9E3 785 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 ABCF3Q9NUQ8 709 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 EHD2Q9NZN4 543 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 CFBP00751 764 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 NSFP46459 744 aaKnown RBP10.63□□□□□ -0.71
COL4A6-210ENST00000621266 YWHAEP62258 255 aaKnown RBP10.63□□□□□ -0.71
COL4A6-210ENST00000621266 ANGPTL8Q6UXH0 198 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 SRLQ86TD4 932 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 NOSTRINQ8IVI9 506 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 NR1H4Q96RI1 486 aaPredicted RBP10.63□□□□□ -0.71
COL4A6-210ENST00000621266 DSCC1Q9BVC3 393 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 KIF9Q9HAQ2 790 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 GTPBP6O43824 516 aaPredicted RBP10.63□□□□□ -0.71
COL4A6-210ENST00000621266 HSPA4LO95757 839 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 SCG2P13521 617 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 PSMD7P51665 324 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 YWHAHQ04917 246 aaPredicted RBP10.63□□□□□ -0.71
COL4A6-210ENST00000621266 SPARCL1Q14515 664 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 MIGA2Q7L4E1 593 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 PCDHA13Q9Y5I0 950 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 A6NJR5 290 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 DIAPH2O60879 1101 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 P4HA1P13674 534 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 TRAPPC10P48553 1259 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 C10orf76Q5T2E6 689 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 RYBPQ8N488 228 aaPredicted RBP10.63□□□□□ -0.71
COL4A6-210ENST00000621266 PBKQ96KB5 322 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 CYP4F11Q9HBI6 524 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 MYOM2P54296 1465 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 K7ENM7 598 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 AFPP02771 609 aaKnown RBP10.63□□□□□ -0.71
COL4A6-210ENST00000621266 PCCAP05165 728 aaPredicted RBP10.63□□□□□ -0.71
COL4A6-210ENST00000621266 Q3C1V9 767 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 TEX2Q8IWB9 1127 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 FAM133AQ8N9E0 248 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 ZBTB38Q8NAP3 1195 aaPredicted RBP10.63□□□□□ -0.71
COL4A6-210ENST00000621266 EXT2Q93063 718 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms