RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 GPR142Q7Z601 462 aa13.9□□□□□ -0.18
TNFAIP3-211ENST00000621150 SLFN12Q8IYM2 578 aa13.9□□□□□ -0.18
TNFAIP3-211ENST00000621150 MRRFQ96E11 262 aaKnown RBP13.9□□□□□ -0.18
TNFAIP3-211ENST00000621150 FAM20AQ96MK3 541 aa13.9□□□□□ -0.18
TNFAIP3-211ENST00000621150 RAB34Q9BZG1 259 aa13.9□□□□□ -0.18
TNFAIP3-211ENST00000621150 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.9□□□□□ -0.18
TNFAIP3-211ENST00000621150 RAVER2Q9HCJ3 691 aaKnown RBP13.9□□□□□ -0.18
TNFAIP3-211ENST00000621150 MAP3K20Q9NYL2 800 aaKnown RBP13.9□□□□□ -0.18
TNFAIP3-211ENST00000621150 COL20A1Q9P218 1284 aa13.9□□□□□ -0.18
TNFAIP3-211ENST00000621150 STK17AQ9UEE5 414 aa13.9□□□□□ -0.18
TNFAIP3-211ENST00000621150 PCDHA12Q9UN75 941 aa13.9□□□□□ -0.18
TNFAIP3-211ENST00000621150 ALPK3Q96L96 1907 aa13.9□□□□□ -0.18
TNFAIP3-211ENST00000621150 SMTNL1A8MU46 457 aa13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 BECN2A8MW95 431 aa13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 GOLGA6L19H0YKK7 550 aa13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 MSH4O15457 936 aa13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 TFRCP02786 760 aaKnown RBP13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 XRCC5P13010 732 aaKnown RBP13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 ERCC5P28715 1186 aaPredicted RBP13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 MYL5Q02045 173 aa13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 CACNB1Q02641 598 aaPredicted RBP13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 KCNB1Q14721 858 aa13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 ECM1Q16610 540 aa13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 MUM1L1Q5H9M0 696 aa13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 CNNM4Q6P4Q7 775 aa13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 FCHSD1Q86WN1 690 aa13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 PDCD7Q8N8D1 485 aaKnown RBP13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 CYP2W1Q8TAV3 490 aa13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 ENOX1Q8TC92 643 aaKnown RBP13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 SOCS4Q8WXH5 440 aa13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 USP6NLQ92738 828 aa13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 C7orf25Q9BPX7 421 aa13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 BLZF1Q9H2G9 400 aa13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 BTBD7Q9P203 1132 aa13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 VAV3Q9UKW4 847 aa13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 ZNF214Q9UL59 606 aaPredicted RBP13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 ADGRG1Q9Y653 693 aa13.9□□□□□ -0.19
TNFAIP3-211ENST00000621150 SZT2Q5T011 3432 aa13.89□□□□□ -0.19
TNFAIP3-211ENST00000621150 COL11A1P12107 1806 aaPredicted RBP13.89□□□□□ -0.19
TNFAIP3-211ENST00000621150 PPP1R3GB7ZBB8 358 aa13.89□□□□□ -0.19
TNFAIP3-211ENST00000621150 FARP2O94887 1054 aaPredicted RBP13.89□□□□□ -0.19
TNFAIP3-211ENST00000621150 CD44P16070 742 aaKnown RBP13.89□□□□□ -0.19
TNFAIP3-211ENST00000621150 CAPN2P17655 700 aa13.89□□□□□ -0.19
TNFAIP3-211ENST00000621150 CDC25BP30305 580 aa13.89□□□□□ -0.19
TNFAIP3-211ENST00000621150 TIE1P35590 1138 aa13.89□□□□□ -0.19
TNFAIP3-211ENST00000621150 PRR16Q569H4 304 aa13.89□□□□□ -0.19
TNFAIP3-211ENST00000621150 MORN1Q5T089 497 aa13.89□□□□□ -0.19
TNFAIP3-211ENST00000621150 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.89□□□□□ -0.19
TNFAIP3-211ENST00000621150 PLEKHH3Q7Z736 793 aa13.89□□□□□ -0.19
TNFAIP3-211ENST00000621150 MCF2L2Q86YR7 1114 aa13.89□□□□□ -0.19
TNFAIP3-211ENST00000621150 EPAS1Q99814 870 aa13.89□□□□□ -0.19
TNFAIP3-211ENST00000621150 TRIM9Q9C026 710 aa13.89□□□□□ -0.19
TNFAIP3-211ENST00000621150 HMX1Q9NP08 348 aaPredicted RBP13.89□□□□□ -0.19
TNFAIP3-211ENST00000621150 MEIS1O00470 390 aa13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 GPR37L1O60883 481 aa13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 LILRB3O75022 631 aa13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 ZBED4O75132 1171 aa13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 RPN1P04843 607 aaKnown RBP13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 CCNA1P78396 465 aa13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 COG2Q14746 738 aa13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 MAP3K21Q5TCX8 1036 aa13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 KRT79Q5XKE5 535 aa13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 B3GNT9Q6UX72 402 aa13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 KCNK18Q7Z418 384 aa13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 SYTL5Q8TDW5 730 aaPredicted RBP13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 SNX29Q8TEQ0 813 aa13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 DPF3Q92784 378 aa13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 CALML4Q96GE6 196 aa13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 MRFAP1L1Q96HT8 127 aa13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 PLIN2Q99541 437 aa13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 DACH1Q9UI36 760 aa13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 RIPK3Q9Y572 518 aa13.88□□□□□ -0.19
TNFAIP3-211ENST00000621150 FRMPD3Q5JV73 1810 aa13.87□□□□□ -0.19
TNFAIP3-211ENST00000621150 H0YGN5 161 aa13.87□□□□□ -0.19
TNFAIP3-211ENST00000621150 RHOBTB3O94955 611 aa13.87□□□□□ -0.19
TNFAIP3-211ENST00000621150 ALAS1P13196 640 aa13.87□□□□□ -0.19
TNFAIP3-211ENST00000621150 ZNF18P17022 549 aa13.87□□□□□ -0.19
TNFAIP3-211ENST00000621150 RGS2P41220 211 aa13.87□□□□□ -0.19
TNFAIP3-211ENST00000621150 ZNF658Q5TYW1 1059 aaPredicted RBP13.87□□□□□ -0.19
TNFAIP3-211ENST00000621150 CPXCR1Q8N123 301 aa13.87□□□□□ -0.19
TNFAIP3-211ENST00000621150 RAD54LQ92698 747 aa13.87□□□□□ -0.19
TNFAIP3-211ENST00000621150 UCN2Q96RP3 112 aa13.87□□□□□ -0.19
TNFAIP3-211ENST00000621150 HTATIP2Q9BUP3 242 aa13.87□□□□□ -0.19
TNFAIP3-211ENST00000621150 MAF1Q9H063 256 aa13.87□□□□□ -0.19
TNFAIP3-211ENST00000621150 ALG2Q9H553 416 aa13.87□□□□□ -0.19
TNFAIP3-211ENST00000621150 EHMT1Q9H9B1 1298 aa13.87□□□□□ -0.19
TNFAIP3-211ENST00000621150 HOXC10Q9NYD6 342 aa13.87□□□□□ -0.19
TNFAIP3-211ENST00000621150 ZNFX1Q9P2E3 1918 aaKnown RBP13.87□□□□□ -0.19
TNFAIP3-211ENST00000621150 PSMD10O75832 226 aa13.86□□□□□ -0.19
TNFAIP3-211ENST00000621150 TMEM132BQ14DG7 1078 aa13.86□□□□□ -0.19
TNFAIP3-211ENST00000621150 CCL14Q16627 93 aa13.86□□□□□ -0.19
TNFAIP3-211ENST00000621150 CEP55Q53EZ4 464 aa13.86□□□□□ -0.19
TNFAIP3-211ENST00000621150 HABP4Q5JVS0 413 aaKnown RBP13.86□□□□□ -0.19
TNFAIP3-211ENST00000621150 NIPA1Q7RTP0 329 aa13.86□□□□□ -0.19
TNFAIP3-211ENST00000621150 TRMT44Q8IYL2 757 aaKnown RBP13.86□□□□□ -0.19
TNFAIP3-211ENST00000621150 SLC5A5Q92911 643 aa13.86□□□□□ -0.19
TNFAIP3-211ENST00000621150 RMND1Q9NWS8 449 aa13.86□□□□□ -0.19
TNFAIP3-211ENST00000621150 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.86□□□□□ -0.19
TNFAIP3-211ENST00000621150 KDM3AQ9Y4C1 1321 aa13.86□□□□□ -0.19
TNFAIP3-211ENST00000621150 ZNF236Q9UL36 1845 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms