RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 DBPQ10586 325 aaPredicted RBP7.67□□□□□ -1.18
VPS29-212ENST00000621131 ZC3H12BQ5HYM0 836 aaKnown RBP7.67□□□□□ -1.18
VPS29-212ENST00000621131 BTBD8Q5XKL5 378 aa7.67□□□□□ -1.18
VPS29-212ENST00000621131 PLEKHH3Q7Z736 793 aa7.67□□□□□ -1.18
VPS29-212ENST00000621131 NLGN4XQ8N0W4 816 aa7.67□□□□□ -1.18
VPS29-212ENST00000621131 TTC9BQ8N6N2 239 aa7.67□□□□□ -1.18
VPS29-212ENST00000621131 STPG3Q8N7X2 389 aa7.67□□□□□ -1.18
VPS29-212ENST00000621131 JMYQ8N9B5 988 aa7.67□□□□□ -1.18
VPS29-212ENST00000621131 IGDCC4Q8TDY8 1250 aa7.67□□□□□ -1.18
VPS29-212ENST00000621131 KRTAP3-1Q9BYR8 98 aa7.67□□□□□ -1.18
VPS29-212ENST00000621131 BARX1Q9HBU1 254 aaPredicted RBP7.67□□□□□ -1.18
VPS29-212ENST00000621131 CBLCQ9ULV8 474 aa7.67□□□□□ -1.18
VPS29-212ENST00000621131 SRPK3Q9UPE1 567 aa7.67□□□□□ -1.18
VPS29-212ENST00000621131 ZNF536O15090 1300 aa7.67□□□□□ -1.18
VPS29-212ENST00000621131 MAN2B1O00754 1011 aa7.66□□□□□ -1.18
VPS29-212ENST00000621131 B4GALT4O60513 344 aa7.66□□□□□ -1.18
VPS29-212ENST00000621131 CRTAMO95727 393 aa7.66□□□□□ -1.18
VPS29-212ENST00000621131 SRGAP2CP0DJJ0 459 aa7.66□□□□□ -1.18
VPS29-212ENST00000621131 NAT1P18440 290 aa7.66□□□□□ -1.18
VPS29-212ENST00000621131 ZXDCQ2QGD7 858 aaPredicted RBP7.66□□□□□ -1.18
VPS29-212ENST00000621131 Q6ZUG5 572 aa7.66□□□□□ -1.18
VPS29-212ENST00000621131 DNAJC7Q99615 494 aa7.66□□□□□ -1.18
VPS29-212ENST00000621131 CATSPERZQ9NTU4 200 aa7.66□□□□□ -1.18
VPS29-212ENST00000621131 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.65□□□□□ -1.18
VPS29-212ENST00000621131 FBXO21O94952 628 aa7.65□□□□□ -1.18
VPS29-212ENST00000621131 PTPN1P18031 435 aaKnown RBP7.65□□□□□ -1.18
VPS29-212ENST00000621131 EPHB4P54760 987 aa7.65□□□□□ -1.18
VPS29-212ENST00000621131 JAM2P57087 298 aa7.65□□□□□ -1.18
VPS29-212ENST00000621131 SOGA3Q5TF21 947 aa7.65□□□□□ -1.18
VPS29-212ENST00000621131 GLB1LQ6UWU2 654 aa7.65□□□□□ -1.18
VPS29-212ENST00000621131 THOC2Q8NI27 1593 aaKnown RBP7.65□□□□□ -1.18
VPS29-212ENST00000621131 AJUBAQ96IF1 538 aa7.65□□□□□ -1.18
VPS29-212ENST00000621131 LOXL4Q96JB6 756 aa7.65□□□□□ -1.18
VPS29-212ENST00000621131 C1QTNF3Q9BXJ4 246 aa7.65□□□□□ -1.18
VPS29-212ENST00000621131 SLC39A2Q9NP94 309 aa7.65□□□□□ -1.18
VPS29-212ENST00000621131 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.64□□□□□ -1.19
VPS29-212ENST00000621131 ZNF561-AS1K7EIQ3 104 aa7.64□□□□□ -1.19
VPS29-212ENST00000621131 INSRRP14616 1297 aa7.64□□□□□ -1.19
VPS29-212ENST00000621131 LACTBP83111 547 aaPredicted RBP7.64□□□□□ -1.19
VPS29-212ENST00000621131 CRY1Q16526 586 aa7.64□□□□□ -1.19
VPS29-212ENST00000621131 PTRH1Q86Y79 214 aaKnown RBP7.64□□□□□ -1.19
VPS29-212ENST00000621131 GSTCDQ8NEC7 633 aa7.64□□□□□ -1.19
VPS29-212ENST00000621131 GPR20Q99678 358 aa7.64□□□□□ -1.19
VPS29-212ENST00000621131 SLC52A2Q9HAB3 445 aa7.64□□□□□ -1.19
VPS29-212ENST00000621131 RIC8BQ9NVN3 520 aa7.64□□□□□ -1.19
VPS29-212ENST00000621131 GSTA4O15217 222 aa7.63□□□□□ -1.19
VPS29-212ENST00000621131 ST5P78524 1137 aa7.63□□□□□ -1.19
VPS29-212ENST00000621131 CPZQ66K79 652 aa7.63□□□□□ -1.19
VPS29-212ENST00000621131 ARHGEF18Q6ZSZ5 1173 aa7.63□□□□□ -1.19
VPS29-212ENST00000621131 SLC7A14Q8TBB6 771 aa7.63□□□□□ -1.19
VPS29-212ENST00000621131 C8orf49Q96NF6 230 aa7.63□□□□□ -1.19
VPS29-212ENST00000621131 SRPK1Q96SB4 655 aaKnown RBP7.63□□□□□ -1.19
VPS29-212ENST00000621131 PTPN18Q99952 460 aa7.63□□□□□ -1.19
VPS29-212ENST00000621131 TACO1Q9BSH4 297 aaKnown RBP7.63□□□□□ -1.19
VPS29-212ENST00000621131 KATNBL1Q9H079 304 aa7.63□□□□□ -1.19
VPS29-212ENST00000621131 SMURF1Q9HCE7 757 aa7.63□□□□□ -1.19
VPS29-212ENST00000621131 MYRFQ9Y2G1 1151 aa7.63□□□□□ -1.19
VPS29-212ENST00000621131 ATP23Q9Y6H3 246 aa7.63□□□□□ -1.19
VPS29-212ENST00000621131 CCDC66A2RUB6 948 aa7.62□□□□□ -1.19
VPS29-212ENST00000621131 NPEPPSL1A6NEC2 478 aa7.62□□□□□ -1.19
VPS29-212ENST00000621131 GPR42O15529 346 aa7.62□□□□□ -1.19
VPS29-212ENST00000621131 C4BPAP04003 597 aaKnown RBP7.62□□□□□ -1.19
VPS29-212ENST00000621131 KRT15P19012 456 aa7.62□□□□□ -1.19
VPS29-212ENST00000621131 CSF2RBP32927 897 aa7.62□□□□□ -1.19
VPS29-212ENST00000621131 TRIM61Q5EBN2 209 aa7.62□□□□□ -1.19
VPS29-212ENST00000621131 FIGNQ5HY92 759 aa7.62□□□□□ -1.19
VPS29-212ENST00000621131 BORCS6Q96GS4 357 aa7.62□□□□□ -1.19
VPS29-212ENST00000621131 RSF1Q96T23 1441 aaPredicted RBP7.61□□□□□ -1.19
VPS29-212ENST00000621131 H0Y858 1186 aa7.61□□□□□ -1.19
VPS29-212ENST00000621131 EFCAB14O75071 495 aa7.61□□□□□ -1.19
VPS29-212ENST00000621131 CLASP2O75122 1294 aaKnown RBP7.61□□□□□ -1.19
VPS29-212ENST00000621131 ZNF20P17024 532 aa7.61□□□□□ -1.19
VPS29-212ENST00000621131 GJA4P35212 333 aa7.61□□□□□ -1.19
VPS29-212ENST00000621131 DNM2P50570 870 aa7.61□□□□□ -1.19
VPS29-212ENST00000621131 FAM47CQ5HY64 1035 aa7.61□□□□□ -1.19
VPS29-212ENST00000621131 ZC3H7AQ8IWR0 971 aaKnown RBP7.61□□□□□ -1.19
VPS29-212ENST00000621131 SCLYQ96I15 445 aa7.61□□□□□ -1.19
VPS29-212ENST00000621131 NDOR1Q9UHB4 597 aa7.61□□□□□ -1.19
VPS29-212ENST00000621131 ST6GALNAC2Q9UJ37 374 aa7.61□□□□□ -1.19
VPS29-212ENST00000621131 SMARCA4P51532 1647 aa7.6□□□□□ -1.19
VPS29-212ENST00000621131 CCDC163A0A0D9SF12 145 aa7.6□□□□□ -1.19
VPS29-212ENST00000621131 KCNK3O14649 394 aa7.6□□□□□ -1.19
VPS29-212ENST00000621131 KCNA6P17658 529 aa7.6□□□□□ -1.19
VPS29-212ENST00000621131 ICAM4Q14773 271 aa7.6□□□□□ -1.19
VPS29-212ENST00000621131 SEC23AQ15436 765 aa7.6□□□□□ -1.19
VPS29-212ENST00000621131 SF3A1Q15459 793 aaKnown RBP7.6□□□□□ -1.19
VPS29-212ENST00000621131 SLFN13Q68D06 897 aa7.6□□□□□ -1.19
VPS29-212ENST00000621131 LILRB2Q8N423 598 aa7.6□□□□□ -1.19
VPS29-212ENST00000621131 CHST13Q8NET6 341 aa7.6□□□□□ -1.19
VPS29-212ENST00000621131 DNERQ8NFT8 737 aa7.6□□□□□ -1.19
VPS29-212ENST00000621131 PMFBP1Q8TBY8 1022 aa7.6□□□□□ -1.19
VPS29-212ENST00000621131 THAP3Q8WTV1 239 aaPredicted RBP7.6□□□□□ -1.19
VPS29-212ENST00000621131 CD248Q9HCU0 757 aa7.6□□□□□ -1.19
VPS29-212ENST00000621131 C1QTNF3-AMACRE9PGA6 284 aa7.59□□□□□ -1.19
VPS29-212ENST00000621131 KCNQ2O43526 872 aa7.59□□□□□ -1.19
VPS29-212ENST00000621131 RASGRP1O95267 797 aa7.59□□□□□ -1.19
VPS29-212ENST00000621131 CNOT4O95628 575 aaKnown RBP7.59□□□□□ -1.19
VPS29-212ENST00000621131 DPP8Q6V1X1 898 aaPredicted RBP7.59□□□□□ -1.19
VPS29-212ENST00000621131 RALYLQ86SE5 291 aaKnown RBP7.59□□□□□ -1.19
VPS29-212ENST00000621131 REXO1L1PQ8IX06 675 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms