RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ACBD5Q5T8D3 534 aaPredicted RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 DCAF15Q66K64 600 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 C1orf228Q6PIY5 440 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 TLK2Q86UE8 772 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 ATP6V1E2Q96A05 226 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 LRFN2Q9ULH4 789 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 ZCCHC11Q5TAX3 1644 aaKnown RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 POC1B-GALNT4F8VUJ3 575 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 IFRD2Q12894 506 aaPredicted RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 C1orf146Q5VVC0 180 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 ZNF790Q6PG37 636 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 TRAF7Q6Q0C0 670 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 DHTKD1Q96HY7 919 aaPredicted RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 VPS39Q96JC1 886 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 SLC52A2Q9HAB3 445 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 ZFP69BQ9UJL9 534 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 ZFYVE9O95405 1425 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 IL10P22301 178 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 IFNAR2P48551 515 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 MFAP3P55082 362 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 ADKP55263 362 aaKnown RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 TAF1BQ53T94 588 aaPredicted RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 HP1BP3Q5SSJ5 553 aaPredicted RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 ZBTB41Q5SVQ8 909 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 KCTD16Q68DU8 428 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 NSMFQ6X4W1 530 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 DIS3L2Q8IYB7 885 aaKnown RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 MRPL50Q8N5N7 158 aaKnown RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 GANCQ8TET4 914 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 EDEM3Q9BZQ6 932 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 BRD8Q9H0E9 1235 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 THRAP3Q9Y2W1 955 aaKnown RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 CLRN2A0PK11 232 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 H7C0S8 307 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 PDE8AO60658 829 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 CRKLP46109 303 aaKnown RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 SCNN1DP51172 638 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 PMS1P54277 932 aaKnown RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 HNRNPH2P55795 449 aaKnown RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 TSTA3Q13630 321 aaPredicted RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 CAPRIN1Q14444 709 aaKnown RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 TRPV6Q9H1D0 765 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 PPCSQ9HAB8 311 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 EPB41L5Q9HCM4 733 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 KLC4Q9NSK0 619 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 SENP1Q9P0U3 644 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 PDP2Q9P2J9 529 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 STRIP2Q9ULQ0 834 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 TYW5A2RUC4 315 aaKnown RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 SMCO2A6NFE2 343 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 DAB2P98082 770 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 PTK2Q05397 1052 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 GNPTABQ3T906 1256 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 MAGEB6Q8N7X4 407 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 GPCPD1Q9NPB8 672 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 LMCD1Q9NZU5 365 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 CAB39Q9Y376 341 aaPredicted RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 MORC2Q9Y6X9 1032 aaPredicted RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 SGK1O00141 431 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 KRT38O76015 456 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 SRGAP2CP0DJJ0 459 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 PTPREP23469 700 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 MAP4P27816 1152 aaKnown RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 TMED2Q15363 201 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 EZH2Q15910 746 aaKnown RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 KLHL38Q2WGJ6 581 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 PPP4R4Q6NUP7 873 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 ADCK1Q86TW2 530 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 ZNF274Q96GC6 653 aaPredicted RBP7.69□□□□□ -1.18
COLCA1-205ENST00000620864 OSBPL1AQ9BXW6 950 aa7.69□□□□□ -1.18
COLCA1-205ENST00000620864 SLC27A2O14975 620 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 KRT19P08727 400 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 KRT7P08729 469 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 OSBPP22059 807 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 OCRLQ01968 901 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 RUNX1T1Q06455 604 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 SGO2Q562F6 1265 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 TCP11X2Q5H9J9 407 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 POTEAQ6S8J7 498 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 PIK3AP1Q6ZUJ8 805 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 EFCAB6Q5THR3 1501 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 GMNCA6NCL1 334 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 DDX39AO00148 427 aaKnown RBP7.68□□□□□ -1.18
COLCA1-205ENST00000620864 XPAP23025 273 aaPredicted RBP7.68□□□□□ -1.18
COLCA1-205ENST00000620864 ITGA6P23229 1130 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 CDC37Q16543 378 aaPredicted RBP7.68□□□□□ -1.18
COLCA1-205ENST00000620864 CEP78Q5JTW2 689 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 BSPRYQ5W0U4 402 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 CEP85Q6P2H3 762 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 PLEKHM3Q6ZWE6 761 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 PDIK1LQ8N165 341 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 SCG3Q8WXD2 468 aaKnown RBP7.68□□□□□ -1.18
COLCA1-205ENST00000620864 GLG1Q92896 1179 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 CMTM5Q96DZ9 223 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 GCOM2Q9BZD3 368 aaPredicted RBP7.68□□□□□ -1.18
COLCA1-205ENST00000620864 USP40Q9NVE5 1235 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 ARHGEF37A1IGU5 675 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 CAPN9O14815 690 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 PNMA6AP0CW24 399 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms