RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 NPHP3-ACAD11A0A0J9YXS1 232 aa21.43■■□□□ 1.02
PDLIM3-212ENST00000620787 GMNCA6NCL1 334 aa21.43■■□□□ 1.02
PDLIM3-212ENST00000620787 PGRMC1O00264 195 aaKnown RBP21.43■■□□□ 1.02
PDLIM3-212ENST00000620787 LDHCP07864 332 aa21.43■■□□□ 1.02
PDLIM3-212ENST00000620787 BIRC3Q13489 604 aa21.43■■□□□ 1.02
PDLIM3-212ENST00000620787 UBE2SQ16763 222 aa21.43■■□□□ 1.02
PDLIM3-212ENST00000620787 CCDC65Q8IXS2 484 aa21.43■■□□□ 1.02
PDLIM3-212ENST00000620787 C3orf20Q8ND61 904 aa21.43■■□□□ 1.02
PDLIM3-212ENST00000620787 CDCA7Q9BWT1 371 aaPredicted RBP21.43■■□□□ 1.02
PDLIM3-212ENST00000620787 DDX25Q9UHL0 483 aaKnown RBP21.43■■□□□ 1.02
PDLIM3-212ENST00000620787 TNRC6CQ9HCJ0 1690 aaKnown RBP21.43■■□□□ 1.02
PDLIM3-212ENST00000620787 LOC102724159A0A0B4J2E5 919 aa21.42■■□□□ 1.02
PDLIM3-212ENST00000620787 E9PMD0 336 aa21.42■■□□□ 1.02
PDLIM3-212ENST00000620787 TRAPPC3O43617 180 aa21.42■■□□□ 1.02
PDLIM3-212ENST00000620787 RASSF9O75901 435 aa21.42■■□□□ 1.02
PDLIM3-212ENST00000620787 FLT3P36888 993 aa21.42■■□□□ 1.02
PDLIM3-212ENST00000620787 EPS15P42566 896 aa21.42■■□□□ 1.02
PDLIM3-212ENST00000620787 BTDP43251 543 aa21.42■■□□□ 1.02
PDLIM3-212ENST00000620787 ADAM9Q13443 819 aa21.42■■□□□ 1.02
PDLIM3-212ENST00000620787 PWP2Q15269 919 aaKnown RBP21.42■■□□□ 1.02
PDLIM3-212ENST00000620787 PTPROQ16827 1216 aa21.42■■□□□ 1.02
PDLIM3-212ENST00000620787 DNAAF5Q86Y56 855 aa21.42■■□□□ 1.02
PDLIM3-212ENST00000620787 METTL13Q8N6R0 699 aa21.42■■□□□ 1.02
PDLIM3-212ENST00000620787 DDX47Q9H0S4 455 aaKnown RBP21.42■■□□□ 1.02
PDLIM3-212ENST00000620787 BMP2KQ9NSY1 1161 aaPredicted RBP21.42■■□□□ 1.02
PDLIM3-212ENST00000620787 DDX20Q9UHI6 824 aaKnown RBP21.42■■□□□ 1.02
PDLIM3-212ENST00000620787 FBXL5Q9UKA1 691 aa21.42■■□□□ 1.02
PDLIM3-212ENST00000620787 CACNB1Q02641 598 aaPredicted RBP21.41■■□□□ 1.02
PDLIM3-212ENST00000620787 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.41■■□□□ 1.02
PDLIM3-212ENST00000620787 EMILIN3Q9NT22 766 aa21.41■■□□□ 1.02
PDLIM3-212ENST00000620787 NAGPAQ9UK23 515 aa21.41■■□□□ 1.02
PDLIM3-212ENST00000620787 IFI16Q16666 785 aaKnown RBP21.41■■□□□ 1.02
PDLIM3-212ENST00000620787 QPCTQ16769 361 aa21.41■■□□□ 1.02
PDLIM3-212ENST00000620787 AGBL2Q5U5Z8 902 aa21.41■■□□□ 1.02
PDLIM3-212ENST00000620787 RUFY4Q6ZNE9 571 aa21.41■■□□□ 1.02
PDLIM3-212ENST00000620787 NBPF5PQ86XG9 351 aaPredicted RBP21.41■■□□□ 1.02
PDLIM3-212ENST00000620787 GPATCH11Q8N954 259 aa21.41■■□□□ 1.02
PDLIM3-212ENST00000620787 TPCN2Q8NHX9 752 aa21.41■■□□□ 1.02
PDLIM3-212ENST00000620787 NT5C3AQ9H0P0 336 aa21.41■■□□□ 1.02
PDLIM3-212ENST00000620787 CNOT8Q9UFF9 292 aaKnown RBP21.41■■□□□ 1.02
PDLIM3-212ENST00000620787 NENFQ9UMX5 172 aa21.41■■□□□ 1.02
PDLIM3-212ENST00000620787 KDM3AQ9Y4C1 1321 aa21.41■■□□□ 1.02
PDLIM3-212ENST00000620787 SLC9A1P19634 815 aa21.4■■□□□ 1.02
PDLIM3-212ENST00000620787 TMOD1P28289 359 aa21.4■■□□□ 1.02
PDLIM3-212ENST00000620787 CLK2P49760 499 aaKnown RBP21.4■■□□□ 1.02
PDLIM3-212ENST00000620787 PPARDQ03181 441 aa21.4■■□□□ 1.02
PDLIM3-212ENST00000620787 EDRF1Q3B7T1 1238 aa21.4■■□□□ 1.02
PDLIM3-212ENST00000620787 HERC4Q5GLZ8 1057 aaPredicted RBP21.4■■□□□ 1.02
PDLIM3-212ENST00000620787 GPBP1Q86WP2 473 aa21.4■■□□□ 1.02
PDLIM3-212ENST00000620787 TEX11Q8IYF3 940 aa21.4■■□□□ 1.02
PDLIM3-212ENST00000620787 KLC4Q9NSK0 619 aa21.4■■□□□ 1.02
PDLIM3-212ENST00000620787 HDAC9Q9UKV0 1011 aa21.4■■□□□ 1.02
PDLIM3-212ENST00000620787 PLA2G4BP0C869 781 aa21.4■■□□□ 1.02
PDLIM3-212ENST00000620787 UCHL3P15374 230 aa21.4■■□□□ 1.02
PDLIM3-212ENST00000620787 PPP2R2AP63151 447 aa21.4■■□□□ 1.02
PDLIM3-212ENST00000620787 KIAA1024Q9UPX6 916 aa21.4■■□□□ 1.02
PDLIM3-212ENST00000620787 BZW2Q9Y6E2 419 aaKnown RBP21.4■■□□□ 1.02
PDLIM3-212ENST00000620787 CCDC188H7C350 402 aa21.39■■□□□ 1.02
PDLIM3-212ENST00000620787 CETN3O15182 167 aa21.39■■□□□ 1.02
PDLIM3-212ENST00000620787 RGL2O15211 777 aa21.39■■□□□ 1.02
PDLIM3-212ENST00000620787 KCNQ2O43526 872 aa21.39■■□□□ 1.02
PDLIM3-212ENST00000620787 ITGA4P13612 1032 aa21.39■■□□□ 1.02
PDLIM3-212ENST00000620787 MAP2K2P36507 400 aa21.39■■□□□ 1.02
PDLIM3-212ENST00000620787 MTMR3Q13615 1198 aa21.39■■□□□ 1.02
PDLIM3-212ENST00000620787 ASPRV1Q53RT3 343 aa21.39■■□□□ 1.02
PDLIM3-212ENST00000620787 ALKBH5Q6P6C2 394 aaKnown RBP21.39■■□□□ 1.02
PDLIM3-212ENST00000620787 PPP4R3CPQ6ZMV5 832 aa21.39■■□□□ 1.02
PDLIM3-212ENST00000620787 CCDC121Q6ZUS5 278 aa21.39■■□□□ 1.02
PDLIM3-212ENST00000620787 RASGEF1CQ8N431 466 aa21.39■■□□□ 1.02
PDLIM3-212ENST00000620787 UBLCP1Q8WVY7 318 aaPredicted RBP21.39■■□□□ 1.02
PDLIM3-212ENST00000620787 CD248Q9HCU0 757 aa21.39■■□□□ 1.02
PDLIM3-212ENST00000620787 SLC40A1Q9NP59 571 aa21.39■■□□□ 1.02
PDLIM3-212ENST00000620787 PCDHA12Q9UN75 941 aa21.39■■□□□ 1.02
PDLIM3-212ENST00000620787 STXBP5LQ9Y2K9 1186 aa21.39■■□□□ 1.02
PDLIM3-212ENST00000620787 FOCADQ5VW36 1801 aa21.39■■□□□ 1.02
PDLIM3-212ENST00000620787 PPP1R11O60927 126 aaPredicted RBP21.39■■□□□ 1.01
PDLIM3-212ENST00000620787 PAEPP09466 180 aa21.39■■□□□ 1.01
PDLIM3-212ENST00000620787 CYP11B2P19099 503 aa21.39■■□□□ 1.01
PDLIM3-212ENST00000620787 KCNQ4P56696 695 aa21.39■■□□□ 1.01
PDLIM3-212ENST00000620787 KCTD19Q17RG1 926 aaPredicted RBP21.39■■□□□ 1.01
PDLIM3-212ENST00000620787 SPRED3Q2MJR0 410 aa21.39■■□□□ 1.01
PDLIM3-212ENST00000620787 PPP1R18Q6NYC8 613 aa21.39■■□□□ 1.01
PDLIM3-212ENST00000620787 SLFN11Q7Z7L1 901 aa21.39■■□□□ 1.01
PDLIM3-212ENST00000620787 RBM46Q8TBY0 533 aaKnown RBP21.39■■□□□ 1.01
PDLIM3-212ENST00000620787 SPAG5Q96R06 1193 aa21.39■■□□□ 1.01
PDLIM3-212ENST00000620787 SETDB2Q96T68 719 aa21.39■■□□□ 1.01
PDLIM3-212ENST00000620787 JPH2Q9BR39 696 aaPredicted RBP21.39■■□□□ 1.01
PDLIM3-212ENST00000620787 OSBPL7Q9BZF2 842 aa21.39■■□□□ 1.01
PDLIM3-212ENST00000620787 ACTR5Q9H9F9 607 aaPredicted RBP21.39■■□□□ 1.01
PDLIM3-212ENST00000620787 ANKIB1Q9P2G1 1089 aa21.39■■□□□ 1.01
PDLIM3-212ENST00000620787 SPATA31A1Q5TZJ5 1347 aa21.39■■□□□ 1.01
PDLIM3-212ENST00000620787 STRCQ7RTU9 1775 aa21.39■■□□□ 1.01
PDLIM3-212ENST00000620787 GPR75-ASB3A0A0A6YYF3 556 aa21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 FRMD3A2A2Y4 597 aa21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 C5orf60A6NFR6 353 aa21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 KRIT1O00522 736 aa21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 DAPK3O43293 454 aa21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 NR2F2P24468 414 aa21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 PRKCIP41743 596 aa21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 TMC3Q7Z5M5 1100 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms