RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, human

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-223	ENST00000620507	DUOX1	Q9NRD9	1551 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	TESPA1	A2RU30	521 aa	Predicted RBP	10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	GFPT2	O94808	682 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	TBC1D8	O95759	1140 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	FER	P16591	822 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	GUCY2F	P51841	1108 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	FAM160B2	Q86V87	743 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	KRT12	Q99456	494 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	TYW1	Q9NV66	732 aa	Known RBP	10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	SERPINA10	Q9UK55	444 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	AMFR	Q9UKV5	643 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	SNX12	Q9UMY4	172 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	SSU72P8	A0A1W2PR75	194 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	RNF225	M0QZC1	329 aa	Predicted RBP	10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	RNF40	O75150	1001 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	PALM	O75781	387 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	RPA1	P27694	616 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	CETN2	P41208	172 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	PLA2G4A	P47712	749 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	HERVK_113	P62684	666 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	HDLBP	Q00341	1268 aa	Known RBP	10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	TNFAIP1	Q13829	316 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	CATSPER3	Q86XQ3	398 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	DYDC2	Q96IM9	177 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	NAP1L3	Q99457	506 aa	Predicted RBP	10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	REEP2	Q9BRK0	252 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	FAM107B	Q9H098	131 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	PRR12	Q9ULL5	1215 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	EXOC7	Q9UPT5	735 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	GJA3	Q9Y6H8	435 aa		10.07	□□□□□ -0.8
RBFOX1-223	ENST00000620507	SLIT2	O94813	1529 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	NCK2	O43639	380 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	ENTPD3	O75355	529 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	CYP11B2	P19099	503 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	C10orf76	Q5T2E6	689 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	ZNF772	Q68DY9	489 aa	Predicted RBP	10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	TTLL6	Q8N841	843 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	ZNF507	Q8TCN5	953 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	PNKP	Q96T60	521 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	ZNF446	Q9NWS9	450 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	RASAL2	Q9UJF2	1139 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	ABCB11	O95342	1321 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	KRIT1	O00522	736 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	HEXIM1	O94992	359 aa	Known RBP	10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	ASNS	P08243	561 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	APTX	Q7Z2E3	356 aa	Known RBP	10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	KCNK18	Q7Z418	384 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	ZFPM1	Q8IX07	1006 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	IWS1	Q96ST2	819 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	MMTAG2	Q9BU76	263 aa	Known RBP	10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	TRIM31	Q9BZY9	425 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	CCDC113	Q9H0I3	377 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	EPB41L5	Q9HCM4	733 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	PITPNM2	Q9BZ72	1349 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	TOGARAM1	Q9Y4F4	1720 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	PDXK	O00764	312 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	TFRC	P02786	760 aa	Known RBP	10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	SLURP2	P0DP57	97 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	EPHB4	P54760	987 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	EDRF1	Q3B7T1	1238 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	XKR9	Q5GH70	373 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	NLRX1	Q86UT6	975 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	TAX1BP1	Q86VP1	789 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	SPATA4	Q8NEY3	305 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	UBLCP1	Q8WVY7	318 aa	Predicted RBP	10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	FUT8	Q9BYC5	575 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	PICK1	Q9NRD5	415 aa		10.06	□□□□□ -0.8
RBFOX1-223	ENST00000620507	EBAG9	O00559	213 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	MED24	O75448	989 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	EYA4	O95677	639 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	ARHGAP25	P42331	645 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	PRELP	P51888	382 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	MYL7	Q01449	175 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	FAM102B	Q5T8I3	360 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	TRAPPC11	Q7Z392	1133 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	FRMD5	Q7Z6J6	570 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	RTKN2	Q8IZC4	609 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	LRRC45	Q96CN5	670 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	SUGCT	Q9HAC7	445 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	STIM2	Q9P246	746 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	UTP11	Q9Y3A2	253 aa	Known RBP	10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	SPOP	O43791	374 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	LMNB1	P20700	586 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	ARHGEF16	Q5VV41	709 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	GSPT2	Q8IYD1	628 aa	Known RBP	10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	PCIF1	Q9H4Z3	704 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	KCNQ5	Q9NR82	932 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	ARHGAP20	Q9P2F6	1191 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	PHLPP1	O60346	1717 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	NWD2	Q9ULI1	1742 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	LRRN2	O75325	713 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	CDK17	Q00537	523 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	CEP55	Q53EZ4	464 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	ARFGAP2	Q8N6H7	521 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	CCDC127	Q96BQ5	260 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	PRMT6	Q96LA8	375 aa	Predicted RBP	10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	ZNF341	Q9BYN7	854 aa		10.05	□□□□□ -0.8
RBFOX1-223	ENST00000620507	IPO5	O00410	1097 aa	Known RBP	10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms