RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 CETN3O15182 167 aa17.57■□□□□ 0.4
DKC1-213ENST00000620277 LRRN2O75325 713 aa17.57■□□□□ 0.4
DKC1-213ENST00000620277 POLD1P28340 1107 aa17.57■□□□□ 0.4
DKC1-213ENST00000620277 NAB2Q15742 525 aa17.57■□□□□ 0.4
DKC1-213ENST00000620277 DCAF8Q5TAQ9 597 aa17.57■□□□□ 0.4
DKC1-213ENST00000620277 POLLQ9UGP5 575 aa17.57■□□□□ 0.4
DKC1-213ENST00000620277 SART1O43290 800 aaKnown RBP17.57■□□□□ 0.4
DKC1-213ENST00000620277 USP8P40818 1118 aa17.57■□□□□ 0.4
DKC1-213ENST00000620277 RHBDL3P58872 404 aa17.57■□□□□ 0.4
DKC1-213ENST00000620277 NFIAQ12857 509 aa17.57■□□□□ 0.4
DKC1-213ENST00000620277 ZC2HC1CQ53FD0 456 aaPredicted RBP17.57■□□□□ 0.4
DKC1-213ENST00000620277 PEX26Q7Z412 305 aa17.57■□□□□ 0.4
DKC1-213ENST00000620277 ATP8A1Q9Y2Q0 1164 aa17.57■□□□□ 0.4
DKC1-213ENST00000620277 PLCH1Q4KWH8 1693 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 HNRNPH3P31942 346 aaKnown RBP17.56■□□□□ 0.4
DKC1-213ENST00000620277 HNRNPH1P31943 449 aaKnown RBP17.56■□□□□ 0.4
DKC1-213ENST00000620277 DHX9Q08211 1270 aaKnown RBP17.56■□□□□ 0.4
DKC1-213ENST00000620277 ANKS1AQ92625 1134 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 CUL5Q93034 780 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 LZTS2Q9BRK4 669 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 BHMT2Q9H2M3 363 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 USP40Q9NVE5 1235 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 FBXL5Q9UKA1 691 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 A0A1B0GUL6 1792 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 GDF11O95390 407 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 CDK17Q00537 523 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 ACTN3Q08043 901 aaPredicted RBP17.56■□□□□ 0.4
DKC1-213ENST00000620277 MSL3Q8N5Y2 521 aaKnown RBP17.56■□□□□ 0.4
DKC1-213ENST00000620277 METTL13Q8N6R0 699 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 CCT8L2Q96SF2 557 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 MAGEF1Q9HAY2 307 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 KCNQ5Q9NR82 932 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 ARMCX3Q9UH62 379 aaPredicted RBP17.56■□□□□ 0.4
DKC1-213ENST00000620277 GGA1Q9UJY5 639 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 CYP11B2P19099 503 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 HSD17B3P37058 310 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 GRAPQ13588 217 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 COG2Q14746 738 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 EXOC3L4Q17RC7 722 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 GLYCTKQ8IVS8 523 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 IQCKQ8N0W5 287 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 RBM46Q8TBY0 533 aaKnown RBP17.56■□□□□ 0.4
DKC1-213ENST00000620277 GRAPLQ8TC17 118 aaPredicted RBP17.56■□□□□ 0.4
DKC1-213ENST00000620277 SH3GL2Q99962 352 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 CD248Q9HCU0 757 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 GGT7Q9UJ14 662 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 DAGLAQ9Y4D2 1042 aa17.56■□□□□ 0.4
DKC1-213ENST00000620277 SHOX2O60902 331 aaPredicted RBP17.55■□□□□ 0.4
DKC1-213ENST00000620277 UCHL3P15374 230 aa17.55■□□□□ 0.4
DKC1-213ENST00000620277 SLCO1A2P46721 670 aa17.55■□□□□ 0.4
DKC1-213ENST00000620277 CTTNQ14247 550 aaKnown RBP17.55■□□□□ 0.4
DKC1-213ENST00000620277 ARSHQ5FYA8 562 aa17.55■□□□□ 0.4
DKC1-213ENST00000620277 SLC10A5Q5PT55 438 aa17.55■□□□□ 0.4
DKC1-213ENST00000620277 MEI1Q5TIA1 1274 aa17.55■□□□□ 0.4
DKC1-213ENST00000620277 USP38Q8NB14 1042 aa17.55■□□□□ 0.4
DKC1-213ENST00000620277 GLG1Q92896 1179 aa17.55■□□□□ 0.4
DKC1-213ENST00000620277 JPH2Q9BR39 696 aaPredicted RBP17.55■□□□□ 0.4
DKC1-213ENST00000620277 LRP5O75197 1615 aa17.55■□□□□ 0.4
DKC1-213ENST00000620277 PHF20L1A8MW92 1017 aa17.55■□□□□ 0.4
DKC1-213ENST00000620277 AKAP3O75969 853 aa17.55■□□□□ 0.4
DKC1-213ENST00000620277 FXR2P51116 673 aaKnown RBP eCLIP17.55■□□□□ 0.43e-7■■■□□ 17.9
DKC1-213ENST00000620277 CYP2J2P51589 502 aa17.55■□□□□ 0.4
DKC1-213ENST00000620277 IFFO1Q0D2I5 559 aa17.55■□□□□ 0.4
DKC1-213ENST00000620277 ZNF473Q8WTR7 871 aaKnown RBP17.55■□□□□ 0.4
DKC1-213ENST00000620277 TMOD4Q9NZQ9 345 aa17.55■□□□□ 0.4
DKC1-213ENST00000620277 TRIM49P0CI25 452 aa17.54■□□□□ 0.4
DKC1-213ENST00000620277 TRIM49CP0CI26 452 aa17.54■□□□□ 0.4
DKC1-213ENST00000620277 NMT1P30419 496 aaKnown RBP17.54■□□□□ 0.4
DKC1-213ENST00000620277 ZNF76P36508 570 aa17.54■□□□□ 0.4
DKC1-213ENST00000620277 MRPL12P52815 198 aaKnown RBP17.54■□□□□ 0.4
DKC1-213ENST00000620277 KRT71Q3SY84 523 aa17.54■□□□□ 0.4
DKC1-213ENST00000620277 ALS2CLQ60I27 953 aa17.54■□□□□ 0.4
DKC1-213ENST00000620277 CATSPER3Q86XQ3 398 aa17.54■□□□□ 0.4
DKC1-213ENST00000620277 REEP2Q9BRK0 252 aa17.54■□□□□ 0.4
DKC1-213ENST00000620277 RIOX1Q9H6W3 641 aa17.54■□□□□ 0.4
DKC1-213ENST00000620277 RIC8AQ9NPQ8 531 aa17.54■□□□□ 0.4
DKC1-213ENST00000620277 LUC7LQ9NQ29 371 aaKnown RBP17.54■□□□□ 0.4
DKC1-213ENST00000620277 LOC102724159A0A0B4J2E5 919 aa17.54■□□□□ 0.4
DKC1-213ENST00000620277 BUB1BO60566 1050 aaPredicted RBP17.54■□□□□ 0.4
DKC1-213ENST00000620277 TNNC1P63316 161 aa17.54■□□□□ 0.4
DKC1-213ENST00000620277 PWP2Q15269 919 aaKnown RBP17.54■□□□□ 0.4
DKC1-213ENST00000620277 CDC37Q16543 378 aaPredicted RBP17.54■□□□□ 0.4
DKC1-213ENST00000620277 QRICH1Q2TAL8 776 aa17.54■□□□□ 0.4
DKC1-213ENST00000620277 TRIM59Q8IWR1 403 aa17.54■□□□□ 0.4
DKC1-213ENST00000620277 INPP4AQ96PE3 977 aaPredicted RBP17.54■□□□□ 0.4
DKC1-213ENST00000620277 GCNT4Q9P109 453 aa17.54■□□□□ 0.4
DKC1-213ENST00000620277 NOC2LQ9Y3T9 749 aaKnown RBP17.54■□□□□ 0.4
DKC1-213ENST00000620277 SNED1Q8TER0 1413 aa17.54■□□□□ 0.4
DKC1-213ENST00000620277 RPS6KA4O75676 772 aa17.53■□□□□ 0.4
DKC1-213ENST00000620277 XRCC5P13010 732 aaKnown RBP17.53■□□□□ 0.4
DKC1-213ENST00000620277 SF3B2Q13435 895 aaKnown RBP17.53■□□□□ 0.4
DKC1-213ENST00000620277 QPCTQ16769 361 aa17.53■□□□□ 0.4
DKC1-213ENST00000620277 SPRED3Q2MJR0 410 aa17.53■□□□□ 0.4
DKC1-213ENST00000620277 TRAPPC3LQ5T215 181 aa17.53■□□□□ 0.4
DKC1-213ENST00000620277 ZNF746Q6NUN9 644 aaPredicted RBP17.53■□□□□ 0.4
DKC1-213ENST00000620277 ZNF662Q6ZS27 426 aa17.53■□□□□ 0.4
DKC1-213ENST00000620277 TPH2Q8IWU9 490 aa17.53■□□□□ 0.4
DKC1-213ENST00000620277 P2RX7Q99572 595 aaKnown RBP17.53■□□□□ 0.4
DKC1-213ENST00000620277 CASZ1Q86V15 1759 aa17.53■□□□□ 0.4
DKC1-213ENST00000620277 GCOM1H8Y6P7 765 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms