RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 CACNA2D4Q7Z3S7 1137 aa14.36□□□□□ -0.11
SKP2-209ENST00000620197 BORCS6Q96GS4 357 aa14.36□□□□□ -0.11
SKP2-209ENST00000620197 NLRC4Q9NPP4 1024 aa14.36□□□□□ -0.11
SKP2-209ENST00000620197 LDHCP07864 332 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 ZNF844Q08AG5 666 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 BYSLQ13895 437 aaKnown RBP14.35□□□□□ -0.11
SKP2-209ENST00000620197 SPDYCQ5MJ68 293 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 FBXW10Q5XX13 1052 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 COA7Q96BR5 231 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 SRP68Q9UHB9 627 aaKnown RBP14.35□□□□□ -0.11
SKP2-209ENST00000620197 PNMA6FA0A0J9YX94 578 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 NPEPPSP55786 919 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 NFIXQ14938 502 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 FRMD5Q7Z6J6 570 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 SLC30A5Q8TAD4 765 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 UBA5Q9GZZ9 404 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 INTUQ9ULD6 942 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 PACSIN2Q9UNF0 486 aaPredicted RBP14.35□□□□□ -0.11
SKP2-209ENST00000620197 PLAAQ9Y263 795 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 SAMM50Q9Y512 469 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 ZNF543Q08ER8 600 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 KCTD16Q68DU8 428 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 NLRP14Q86W24 1093 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 HES6Q96HZ4 224 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 CCT8L2Q96SF2 557 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 SETDB2Q96T68 719 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 NT5C3AQ9H0P0 336 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 RABEP2Q9H5N1 569 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 DDX25Q9UHL0 483 aaKnown RBP14.35□□□□□ -0.11
SKP2-209ENST00000620197 NAGPAQ9UK23 515 aa14.35□□□□□ -0.11
SKP2-209ENST00000620197 NDUFAB1O14561 156 aa14.34□□□□□ -0.11
SKP2-209ENST00000620197 RASSF9O75901 435 aa14.34□□□□□ -0.11
SKP2-209ENST00000620197 INPP5BP32019 993 aa14.34□□□□□ -0.11
SKP2-209ENST00000620197 EPHA7Q15375 998 aa14.34□□□□□ -0.11
SKP2-209ENST00000620197 KIAA0753Q2KHM9 967 aa14.34□□□□□ -0.11
SKP2-209ENST00000620197 SMIM5Q71RC9 77 aa14.34□□□□□ -0.11
SKP2-209ENST00000620197 AJAP1Q9UKB5 411 aaPredicted RBP14.34□□□□□ -0.11
SKP2-209ENST00000620197 BZW2Q9Y6E2 419 aaKnown RBP14.34□□□□□ -0.11
SKP2-209ENST00000620197 RGPD3A6NKT7 1758 aaPredicted RBP14.34□□□□□ -0.11
SKP2-209ENST00000620197 RGPD4Q7Z3J3 1758 aa14.34□□□□□ -0.11
SKP2-209ENST00000620197 DRP2Q13474 957 aa14.34□□□□□ -0.11
SKP2-209ENST00000620197 NBPF5PQ86XG9 351 aaPredicted RBP14.34□□□□□ -0.11
SKP2-209ENST00000620197 FAM133AQ8N9E0 248 aa14.34□□□□□ -0.11
SKP2-209ENST00000620197 TPCN2Q8NHX9 752 aa14.34□□□□□ -0.11
SKP2-209ENST00000620197 VCPKMTQ9H867 229 aa14.34□□□□□ -0.11
SKP2-209ENST00000620197 LUC7LQ9NQ29 371 aaKnown RBP14.34□□□□□ -0.11
SKP2-209ENST00000620197 ANKRD31Q8N7Z5 1873 aa14.34□□□□□ -0.11
SKP2-209ENST00000620197 MYO1FO00160 1098 aa14.33□□□□□ -0.11
SKP2-209ENST00000620197 TRAF5O00463 557 aa14.33□□□□□ -0.11
SKP2-209ENST00000620197 TRAPPC3O43617 180 aa14.33□□□□□ -0.11
SKP2-209ENST00000620197 PON1P27169 355 aa14.33□□□□□ -0.11
SKP2-209ENST00000620197 ACTN3Q08043 901 aaPredicted RBP14.33□□□□□ -0.11
SKP2-209ENST00000620197 KCNH2Q12809 1159 aa14.33□□□□□ -0.11
SKP2-209ENST00000620197 CRY2Q49AN0 593 aa14.33□□□□□ -0.11
SKP2-209ENST00000620197 MOXD1Q6UVY6 613 aa14.33□□□□□ -0.11
SKP2-209ENST00000620197 ZNF804AQ7Z570 1209 aa14.33□□□□□ -0.11
SKP2-209ENST00000620197 ADGRF4Q8IZF3 695 aa14.33□□□□□ -0.11
SKP2-209ENST00000620197 CERKQ8TCT0 537 aa14.33□□□□□ -0.11
SKP2-209ENST00000620197 SUCLA2Q9P2R7 463 aaPredicted RBP14.33□□□□□ -0.11
SKP2-209ENST00000620197 ADAMTS1Q9UHI8 967 aa14.33□□□□□ -0.11
SKP2-209ENST00000620197 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.33□□□□□ -0.11
SKP2-209ENST00000620197 ZNFX1Q9P2E3 1918 aaKnown RBP14.33□□□□□ -0.11
SKP2-209ENST00000620197 NCANO14594 1321 aa14.33□□□□□ -0.11
SKP2-209ENST00000620197 CASP5P51878 434 aa14.33□□□□□ -0.12
SKP2-209ENST00000620197 TNNC1P63316 161 aa14.33□□□□□ -0.12
SKP2-209ENST00000620197 AGBL2Q5U5Z8 902 aa14.33□□□□□ -0.12
SKP2-209ENST00000620197 TPTE2Q6XPS3 522 aa14.33□□□□□ -0.12
SKP2-209ENST00000620197 ETNPPLQ8TBG4 499 aa14.33□□□□□ -0.12
SKP2-209ENST00000620197 FRMPD2Q68DX3 1309 aaPredicted RBP14.33□□□□□ -0.12
SKP2-209ENST00000620197 PLA2G4BP0C869 781 aa14.33□□□□□ -0.12
SKP2-209ENST00000620197 UCHL3P15374 230 aa14.33□□□□□ -0.12
SKP2-209ENST00000620197 PLCG2P16885 1265 aa14.33□□□□□ -0.12
SKP2-209ENST00000620197 ATP1A2P50993 1020 aa14.33□□□□□ -0.12
SKP2-209ENST00000620197 KLHL30Q0D2K2 578 aa14.33□□□□□ -0.12
SKP2-209ENST00000620197 BIRC3Q13489 604 aa14.33□□□□□ -0.12
SKP2-209ENST00000620197 ASIC2Q16515 512 aa14.33□□□□□ -0.12
SKP2-209ENST00000620197 GPIHBP1Q8IV16 184 aa14.33□□□□□ -0.12
SKP2-209ENST00000620197 ATP8B4Q8TF62 1192 aa14.33□□□□□ -0.12
SKP2-209ENST00000620197 CDK5RAP3Q96JB5 506 aa14.33□□□□□ -0.12
SKP2-209ENST00000620197 RUFY1Q96T51 708 aa14.33□□□□□ -0.12
SKP2-209ENST00000620197 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.33□□□□□ -0.122e-6■■■■□ 19.8
SKP2-209ENST00000620197 EPB41L4BQ9H329 900 aa14.33□□□□□ -0.12
SKP2-209ENST00000620197 CD209Q9NNX6 404 aa14.33□□□□□ -0.12
SKP2-209ENST00000620197 GTPBP10A4D1E9 387 aaKnown RBP14.32□□□□□ -0.12
SKP2-209ENST00000620197 GUCY2FP51841 1108 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 HDLBPQ00341 1268 aaKnown RBP14.32□□□□□ -0.12
SKP2-209ENST00000620197 NFIL3Q16649 462 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 TDRD12Q587J7 1177 aaKnown RBP14.32□□□□□ -0.12
SKP2-209ENST00000620197 EMILIN3Q9NT22 766 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 NPHP3-ACAD11A0A0J9YXS1 232 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 E9PMD0 336 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 BICDL1Q6ZP65 573 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 NT5DC3Q86UY8 548 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 TEX11Q8IYF3 940 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 IFT81Q8WYA0 676 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 GJA10Q969M2 543 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 TLCD1Q96CP7 247 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 SLITRK6Q9H5Y7 841 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 MED24O75448 989 aa14.32□□□□□ -0.12
SKP2-209ENST00000620197 FLT3P36888 993 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms