RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 NDST4Q9H3R1 872 aa21.09■□□□□ 0.97
PSPC1-206ENST00000619300 PKD2L1Q9P0L9 805 aa21.09■□□□□ 0.97
PSPC1-206ENST00000619300 WRAP73Q9P2S5 460 aaPredicted RBP21.09■□□□□ 0.97
PSPC1-206ENST00000619300 DDX39AO00148 427 aaKnown RBP21.08■□□□□ 0.97
PSPC1-206ENST00000619300 ZBTB39O15060 712 aa21.08■□□□□ 0.97
PSPC1-206ENST00000619300 TBCAO75347 108 aaKnown RBP21.08■□□□□ 0.97
PSPC1-206ENST00000619300 ITGB3BPQ13352 177 aaPredicted RBP21.08■□□□□ 0.97
PSPC1-206ENST00000619300 TMEM132BQ14DG7 1078 aa21.08■□□□□ 0.97
PSPC1-206ENST00000619300 DLK2Q6UY11 383 aa21.08■□□□□ 0.97
PSPC1-206ENST00000619300 EPM2AIP1Q7L775 607 aaPredicted RBP21.08■□□□□ 0.97
PSPC1-206ENST00000619300 SNCAIPQ9Y6H5 919 aa21.08■□□□□ 0.97
PSPC1-206ENST00000619300 RASSF10A6NK89 507 aa21.07■□□□□ 0.96
PSPC1-206ENST00000619300 RSPH10B2B2RC85 870 aa21.07■□□□□ 0.96
PSPC1-206ENST00000619300 DYNC1I1O14576 645 aa21.07■□□□□ 0.96
PSPC1-206ENST00000619300 RSPH10BP0C881 870 aa21.07■□□□□ 0.96
PSPC1-206ENST00000619300 MYCLP12524 364 aaPredicted RBP21.07■□□□□ 0.96
PSPC1-206ENST00000619300 GAP43P17677 238 aa21.07■□□□□ 0.96
PSPC1-206ENST00000619300 CASP5P51878 434 aa21.07■□□□□ 0.96
PSPC1-206ENST00000619300 VGLL4Q14135 290 aa21.07■□□□□ 0.96
PSPC1-206ENST00000619300 XRRA1Q6P2D8 792 aa21.07■□□□□ 0.96
PSPC1-206ENST00000619300 PPP4R3CPQ6ZMV5 832 aa21.07■□□□□ 0.96
PSPC1-206ENST00000619300 MIER3Q7Z3K6 550 aa21.07■□□□□ 0.96
PSPC1-206ENST00000619300 LXNQ9BS40 222 aa21.07■□□□□ 0.96
PSPC1-206ENST00000619300 TBC1D22BQ9NU19 505 aa21.07■□□□□ 0.96
PSPC1-206ENST00000619300 GNA14O95837 355 aa21.07■□□□□ 0.96
PSPC1-206ENST00000619300 YBX3P16989 372 aaKnown RBP eCLIP21.07■□□□□ 0.962e-7■■■■□ 22.9
PSPC1-206ENST00000619300 ETF1P62495 437 aaKnown RBP21.07■□□□□ 0.96
PSPC1-206ENST00000619300 EDRF1Q3B7T1 1238 aa21.07■□□□□ 0.96
PSPC1-206ENST00000619300 CYP26C1Q6V0L0 522 aa21.07■□□□□ 0.96
PSPC1-206ENST00000619300 PURBQ96QR8 312 aaKnown RBP21.07■□□□□ 0.96
PSPC1-206ENST00000619300 DNAJC7Q99615 494 aa21.07■□□□□ 0.96
PSPC1-206ENST00000619300 DESI2Q9BSY9 194 aa21.07■□□□□ 0.96
PSPC1-206ENST00000619300 KCND2Q9NZV8 630 aa21.07■□□□□ 0.96
PSPC1-206ENST00000619300 PPP1R12BO60237 982 aaPredicted RBP21.06■□□□□ 0.96
PSPC1-206ENST00000619300 CCDC175P0C221 793 aa21.06■□□□□ 0.96
PSPC1-206ENST00000619300 TRIM21P19474 475 aaKnown RBP21.06■□□□□ 0.96
PSPC1-206ENST00000619300 KNOP1Q1ED39 458 aaKnown RBP21.06■□□□□ 0.96
PSPC1-206ENST00000619300 C9orf131Q5VYM1 1079 aa21.06■□□□□ 0.96
PSPC1-206ENST00000619300 TRIM65Q6PJ69 517 aa21.06■□□□□ 0.96
PSPC1-206ENST00000619300 SYT10Q6XYQ8 523 aa21.06■□□□□ 0.96
PSPC1-206ENST00000619300 ZC3H3Q8IXZ2 948 aaKnown RBP21.06■□□□□ 0.96
PSPC1-206ENST00000619300 BANK1Q8NDB2 785 aa21.06■□□□□ 0.96
PSPC1-206ENST00000619300 TEX13BQ9BXU2 312 aa21.06■□□□□ 0.96
PSPC1-206ENST00000619300 TTYH3Q9C0H2 523 aa21.06■□□□□ 0.96
PSPC1-206ENST00000619300 OLFML3Q9NRN5 406 aa21.06■□□□□ 0.96
PSPC1-206ENST00000619300 ADGRG1Q9Y653 693 aa21.06■□□□□ 0.96
PSPC1-206ENST00000619300 MYPNQ86TC9 1320 aa21.06■□□□□ 0.96
PSPC1-206ENST00000619300 PHIPQ8WWQ0 1821 aa21.06■□□□□ 0.96
PSPC1-206ENST00000619300 ADM5C9JUS6 153 aa21.05■□□□□ 0.96
PSPC1-206ENST00000619300 P4HBP07237 508 aaKnown RBP21.05■□□□□ 0.96
PSPC1-206ENST00000619300 KLK7P49862 253 aa21.05■□□□□ 0.96
PSPC1-206ENST00000619300 ERVK-24P63145 666 aa21.05■□□□□ 0.96
PSPC1-206ENST00000619300 FIGNQ5HY92 759 aa21.05■□□□□ 0.96
PSPC1-206ENST00000619300 PCMTD1Q96MG8 357 aaPredicted RBP21.05■□□□□ 0.96
PSPC1-206ENST00000619300 MRPL44Q9H9J2 332 aaKnown RBP21.05■□□□□ 0.96
PSPC1-206ENST00000619300 POLD4Q9HCU8 107 aa21.05■□□□□ 0.96
PSPC1-206ENST00000619300 FAM13AO94988 1023 aa21.05■□□□□ 0.96
PSPC1-206ENST00000619300 ADAM9Q13443 819 aa21.05■□□□□ 0.96
PSPC1-206ENST00000619300 BMT2Q1RMZ1 405 aa21.05■□□□□ 0.96
PSPC1-206ENST00000619300 TSR1Q2NL82 804 aaKnown RBP21.05■□□□□ 0.96
PSPC1-206ENST00000619300 VSIG10LQ86VR7 867 aa21.05■□□□□ 0.96
PSPC1-206ENST00000619300 IQCDQ96DY2 449 aa21.05■□□□□ 0.96
PSPC1-206ENST00000619300 ZSWIM4Q9H7M6 989 aa21.05■□□□□ 0.96
PSPC1-206ENST00000619300 TRAF3IP3Q9Y228 551 aa21.05■□□□□ 0.96
PSPC1-206ENST00000619300 RLFQ13129 1914 aa21.05■□□□□ 0.96
PSPC1-206ENST00000619300 PARP14Q460N5 1801 aa21.04■□□□□ 0.96
PSPC1-206ENST00000619300 POLR2AP24928 1970 aaKnown RBP21.04■□□□□ 0.96
PSPC1-206ENST00000619300 SPDYE16A6NNV3 312 aaPredicted RBP21.04■□□□□ 0.96
PSPC1-206ENST00000619300 SFI1A8K8P3 1242 aa21.04■□□□□ 0.96
PSPC1-206ENST00000619300 MYBP10242 640 aa21.04■□□□□ 0.96
PSPC1-206ENST00000619300 HOXD13P35453 343 aa21.04■□□□□ 0.96
PSPC1-206ENST00000619300 MARSP56192 900 aaKnown RBP21.04■□□□□ 0.96
PSPC1-206ENST00000619300 CCDC40Q4G0X9 1142 aa21.04■□□□□ 0.96
PSPC1-206ENST00000619300 BCAS3Q9H6U6 928 aa21.04■□□□□ 0.96
PSPC1-206ENST00000619300 CSADQ9Y600 493 aa21.04■□□□□ 0.96
PSPC1-206ENST00000619300 PDXKO00764 312 aa21.04■□□□□ 0.96
PSPC1-206ENST00000619300 PRPF6O94906 941 aaKnown RBP21.04■□□□□ 0.96
PSPC1-206ENST00000619300 CCND2P30279 289 aa21.04■□□□□ 0.96
PSPC1-206ENST00000619300 MYCT1Q8N699 235 aa21.04■□□□□ 0.96
PSPC1-206ENST00000619300 MAF1Q9H063 256 aa21.04■□□□□ 0.96
PSPC1-206ENST00000619300 PARVGQ9HBI0 331 aa21.04■□□□□ 0.96
PSPC1-206ENST00000619300 AGPAT5Q9NUQ2 364 aa21.04■□□□□ 0.96
PSPC1-206ENST00000619300 SIK3Q9Y2K2 1263 aa21.04■□□□□ 0.96
PSPC1-206ENST00000619300 A0A1W2PQJ5 194 aa21.03■□□□□ 0.96
PSPC1-206ENST00000619300 ARHGEF35A5YM69 484 aa21.03■□□□□ 0.96
PSPC1-206ENST00000619300 CETN3O15182 167 aa21.03■□□□□ 0.96
PSPC1-206ENST00000619300 GCNT3O95395 438 aa21.03■□□□□ 0.96
PSPC1-206ENST00000619300 NR3C2P08235 984 aa21.03■□□□□ 0.96
PSPC1-206ENST00000619300 ZBED6P86452 979 aa21.03■□□□□ 0.96
PSPC1-206ENST00000619300 NSUN6Q8TEA1 469 aaKnown RBP21.03■□□□□ 0.96
PSPC1-206ENST00000619300 ACAD9Q9H845 621 aa21.03■□□□□ 0.96
PSPC1-206ENST00000619300 ODF2LQ9ULJ1 636 aa21.03■□□□□ 0.96
PSPC1-206ENST00000619300 SAMM50Q9Y512 469 aa21.03■□□□□ 0.96
PSPC1-206ENST00000619300 TESPA1A2RU30 521 aaPredicted RBP21.02■□□□□ 0.96
PSPC1-206ENST00000619300 CALUO43852 315 aaPredicted RBP21.02■□□□□ 0.96
PSPC1-206ENST00000619300 ATP9AO75110 1047 aa21.02■□□□□ 0.96
PSPC1-206ENST00000619300 ZNF131P52739 623 aa21.02■□□□□ 0.96
PSPC1-206ENST00000619300 PLS1Q14651 629 aa21.02■□□□□ 0.96
PSPC1-206ENST00000619300 CHP1Q99653 195 aa21.02■□□□□ 0.96
PSPC1-206ENST00000619300 SEL1LQ9UBV2 794 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms