RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 PECAM1P16284 738 aaPredicted RBP11.83□□□□□ -0.52
UPF3A-212ENST00000619079 ARID4AP29374 1257 aaPredicted RBP11.83□□□□□ -0.52
UPF3A-212ENST00000619079 ECHS1P30084 290 aa11.83□□□□□ -0.52
UPF3A-212ENST00000619079 PEX19P40855 299 aa11.83□□□□□ -0.52
UPF3A-212ENST00000619079 SLC1A4P43007 532 aa11.83□□□□□ -0.52
UPF3A-212ENST00000619079 RPS8P62241 208 aaKnown RBP11.83□□□□□ -0.52
UPF3A-212ENST00000619079 GPR162Q16538 588 aa11.83□□□□□ -0.52
UPF3A-212ENST00000619079 IL17AQ16552 155 aa11.83□□□□□ -0.52
UPF3A-212ENST00000619079 ANKRD40Q6AI12 368 aa11.83□□□□□ -0.52
UPF3A-212ENST00000619079 APLFQ8IW19 511 aaPredicted RBP11.83□□□□□ -0.52
UPF3A-212ENST00000619079 DHX37Q8IY37 1157 aaKnown RBP11.83□□□□□ -0.52
UPF3A-212ENST00000619079 ANKRD13CQ8N6S4 541 aa11.83□□□□□ -0.52
UPF3A-212ENST00000619079 SYN2Q92777 582 aaPredicted RBP11.83□□□□□ -0.52
UPF3A-212ENST00000619079 PBKQ96KB5 322 aa11.83□□□□□ -0.52
UPF3A-212ENST00000619079 FAM207AQ9NSI2 230 aaPredicted RBP11.83□□□□□ -0.52
UPF3A-212ENST00000619079 CNOT8Q9UFF9 292 aaKnown RBP11.83□□□□□ -0.52
UPF3A-212ENST00000619079 MYH2Q9UKX2 1941 aa11.83□□□□□ -0.52
UPF3A-212ENST00000619079 TNKSO95271 1327 aa11.83□□□□□ -0.52
UPF3A-212ENST00000619079 GSG1L2A8MUP6 293 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 AHCYL1O43865 530 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 CTNND1O60716 968 aaKnown RBP11.82□□□□□ -0.52
UPF3A-212ENST00000619079 ZNF131P52739 623 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 BLMHQ13867 455 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 SEC23AQ15436 765 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 NPY5RQ15761 445 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 MAN2A1Q16706 1144 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 KIAA0753Q2KHM9 967 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 KRT71Q3SY84 523 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 SLC9C1Q4G0N8 1177 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 NAALADL2Q58DX5 795 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 PIK3AP1Q6ZUJ8 805 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 KLHL7Q8IXQ5 586 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 GBP7Q8N8V2 638 aaPredicted RBP11.82□□□□□ -0.52
UPF3A-212ENST00000619079 OR2W6PQ8NHA6 318 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 CCSER1Q9C0I3 900 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 MMRN2Q9H8L6 949 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 FBXL5Q9UKA1 691 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 CCDC188H7C350 402 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 PRDM1O75626 825 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 BBOX1O75936 387 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 FESP07332 822 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 UBA7P41226 1012 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 GFPT1Q06210 699 aaPredicted RBP11.82□□□□□ -0.52
UPF3A-212ENST00000619079 CCDC38Q502W7 563 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 PDXDC1Q6P996 788 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 LDHAL6AQ6ZMR3 332 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 DTHD1Q6ZMT9 781 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 TRPM8Q7Z2W7 1104 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 PIGWQ7Z7B1 504 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 STAG2Q8N3U4 1231 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 TLCD1Q96CP7 247 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 CNNM1Q9NRU3 951 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 TACC3Q9Y6A5 838 aa11.82□□□□□ -0.52
UPF3A-212ENST00000619079 BHMG1C9JSJ3 638 aaPredicted RBP11.81□□□□□ -0.52
UPF3A-212ENST00000619079 NEFHP12036 1026 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 CALML3P27482 149 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 HOXA7P31268 230 aaPredicted RBP11.81□□□□□ -0.52
UPF3A-212ENST00000619079 MKRN4PQ13434 485 aaPredicted RBP11.81□□□□□ -0.52
UPF3A-212ENST00000619079 PDCD2Q16342 344 aaPredicted RBP11.81□□□□□ -0.52
UPF3A-212ENST00000619079 TDRD12Q587J7 1177 aaKnown RBP11.81□□□□□ -0.52
UPF3A-212ENST00000619079 CNNM4Q6P4Q7 775 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 CROCCP2Q86T23 111 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 TEX9Q8N6V9 391 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 ACTRT1Q8TDG2 376 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 BAP1Q92560 729 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 ZNF570Q96NI8 536 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 ZNF317Q96PQ6 595 aaPredicted RBP11.81□□□□□ -0.52
UPF3A-212ENST00000619079 SLC5A4Q9NY91 659 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 KIF13BQ9NQT8 1826 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 DCAF8L1A6NGE4 600 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 DDAH1O94760 285 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 FTCDO95954 541 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 SERPING1P05155 500 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 CCNG1P51959 295 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 NLRP5P59047 1200 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 PDE4DQ08499 809 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 TMC3Q7Z5M5 1100 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 TBC1D1Q86TI0 1168 aaPredicted RBP11.81□□□□□ -0.52
UPF3A-212ENST00000619079 SPDYE1Q8NFV5 336 aaPredicted RBP11.81□□□□□ -0.52
UPF3A-212ENST00000619079 AGAP11Q8TF27 550 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 IFT74Q96LB3 600 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 SLITRK6Q9H5Y7 841 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 ARMT1Q9H993 441 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 COL11A2P13942 1736 aaPredicted RBP11.81□□□□□ -0.52
UPF3A-212ENST00000619079 LAMB2P55268 1798 aa11.81□□□□□ -0.52
UPF3A-212ENST00000619079 EME2A4GXA9 379 aaPredicted RBP11.8□□□□□ -0.52
UPF3A-212ENST00000619079 LAD1O00515 517 aa11.8□□□□□ -0.52
UPF3A-212ENST00000619079 ABLIM1O14639 778 aa11.8□□□□□ -0.52
UPF3A-212ENST00000619079 MMEP08473 750 aa11.8□□□□□ -0.52
UPF3A-212ENST00000619079 NQO1P15559 274 aaKnown RBP11.8□□□□□ -0.52
UPF3A-212ENST00000619079 AMPD3Q01432 767 aa11.8□□□□□ -0.52
UPF3A-212ENST00000619079 LMNB2Q03252 620 aa11.8□□□□□ -0.52
UPF3A-212ENST00000619079 EHHADHQ08426 723 aa11.8□□□□□ -0.52
UPF3A-212ENST00000619079 RPS6KA1Q15418 735 aa11.8□□□□□ -0.52
UPF3A-212ENST00000619079 TRADDQ15628 312 aa11.8□□□□□ -0.52
UPF3A-212ENST00000619079 TMTC3Q6ZXV5 915 aa11.8□□□□□ -0.52
UPF3A-212ENST00000619079 SCFD2Q8WU76 684 aa11.8□□□□□ -0.52
UPF3A-212ENST00000619079 CCDC134Q9H6E4 229 aa11.8□□□□□ -0.52
UPF3A-212ENST00000619079 KCNMB3Q9NPA1 279 aa11.8□□□□□ -0.52
UPF3A-212ENST00000619079 FAM114A2Q9NRY5 505 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms