RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 PFKFB3Q16875 520 aaPredicted RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 SLFN13Q68D06 897 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 DPF2Q92785 391 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 MRRFQ96E11 262 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 TEKT3Q9BXF9 490 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 SEC31BQ9NQW1 1179 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 RYDENQ9NUL5 291 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 KIAA1522Q9P206 1035 aaPredicted RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 IVNS1ABPQ9Y6Y0 642 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 ALDH1B1P30837 517 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 CTAGE3PQ8IX95 158 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 SYNE4Q8N205 404 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 C1orf112Q9NSG2 853 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ATP8A1Q9Y2Q0 1164 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ADAT2Q7Z6V5 191 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 NLRP14Q86W24 1093 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 GPR101Q96P66 508 aaPredicted RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 TRIM55Q9BYV6 548 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 HPS5Q9UPZ3 1129 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 CCT8L1PA6NM43 557 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 STXBP3O00186 592 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 NR1D1P20393 614 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ASPHQ12797 758 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 PDCLQ13371 301 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ZNF280DQ6N043 979 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 CRLF3Q8IUI8 442 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 TTC25Q96NG3 672 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 EDEM3Q9BZQ6 932 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 L1RE1Q9UN81 338 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 TRIM33Q9UPN9 1127 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 PLEKHG1Q9ULL1 1385 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 CYP27B1O15528 508 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 MED7O43513 233 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 GGPS1O95749 300 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 RPSAP08865 295 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 ZNF18P17022 549 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 CDC25AP30304 524 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 SERPINB6P35237 376 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 EIF6P56537 245 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 GPC5P78333 572 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 PDE1BQ01064 536 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 CHRNDQ07001 517 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ALCAMQ13740 583 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 KAZNQ674X7 775 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 BTN2A1Q7KYR7 527 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 METTL16Q86W50 562 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 NLRP7Q8WX94 980 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 PMM1Q92871 262 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 HPCAL4Q9UM19 191 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ZRANB2O95218 330 aaKnown RBP eCLIP3.29□□□□□ -1.88
LPP-221ENST00000618621 TMOD1P28289 359 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 PTPN12Q05209 780 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 TBC1D9BQ66K14 1250 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 USP49Q70CQ1 688 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 TRAPPC11Q7Z392 1133 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 NOA1Q8NC60 698 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 TSPAN18Q96SJ8 248 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.29□□□□□ -1.88
LPP-221ENST00000618621 EIF2AQ9BY44 585 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 PUS7LQ9H0K6 701 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 SLITRK6Q9H5Y7 841 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 GREM2Q9H772 168 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 MLXIPQ9HAP2 919 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 PI4KBQ9UBF8 816 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 H3BQF6 201 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 TJP3O95049 919 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 MMP1P03956 469 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 GTF2IP78347 998 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 LRIG3Q6UXM1 1119 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 TC2NQ8N9U0 490 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 STK33Q9BYT3 514 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 LY9Q9HBG7 655 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 KLC4Q9NSK0 619 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 NFU1Q9UMS0 254 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 KDM4FA0A1W2PPD8 638 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 PFDN1O60925 122 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 GFPT2O94808 682 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 PRR29P0C7W0 189 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 SKIP12755 728 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 PMS2P54278 862 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 XKR9Q5GH70 373 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 RAD9BQ6WBX8 426 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 COG1Q8WTW3 980 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ELAC2Q9BQ52 826 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 WNT8AQ9H1J5 351 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 TIMMDC1Q9NPL8 285 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 APC2O95996 2303 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 CHGBP05060 677 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 TCF3P15923 654 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ORC2Q13416 577 aaPredicted RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 DLGAP5Q15398 846 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 SURF1Q15526 300 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 SGO2Q562F6 1265 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 SUSD4Q5VX71 490 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 FRMD5Q7Z6J6 570 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 CMTR1Q8N1G2 835 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 C3orf20Q8ND61 904 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 OXER1Q8TDS5 423 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 CDHR1Q96JP9 859 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms