RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 STAT3P40763 770 aa22.35■■□□□ 1.17
NEK3-208ENST00000618534 USP11P51784 963 aa22.35■■□□□ 1.17
NEK3-208ENST00000618534 ARSHQ5FYA8 562 aa22.35■■□□□ 1.17
NEK3-208ENST00000618534 CEP85LQ5SZL2 805 aa22.35■■□□□ 1.17
NEK3-208ENST00000618534 DPY19L2P1Q6NXN4 242 aa22.35■■□□□ 1.17
NEK3-208ENST00000618534 DAGLAQ9Y4D2 1042 aa22.35■■□□□ 1.17
NEK3-208ENST00000618534 FOCADQ5VW36 1801 aa22.35■■□□□ 1.17
NEK3-208ENST00000618534 MED24O75448 989 aa22.35■■□□□ 1.17
NEK3-208ENST00000618534 TTLL1O95922 423 aa22.35■■□□□ 1.17
NEK3-208ENST00000618534 EDRF1Q3B7T1 1238 aa22.35■■□□□ 1.17
NEK3-208ENST00000618534 NAA35Q5VZE5 725 aa22.35■■□□□ 1.17
NEK3-208ENST00000618534 FBXW10Q5XX13 1052 aa22.35■■□□□ 1.17
NEK3-208ENST00000618534 SLF2Q8IX21 1173 aa22.35■■□□□ 1.17
NEK3-208ENST00000618534 PLCD3Q8N3E9 789 aa22.35■■□□□ 1.17
NEK3-208ENST00000618534 CNBD1Q8NA66 436 aa22.35■■□□□ 1.17
NEK3-208ENST00000618534 ISCUQ9H1K1 167 aa22.35■■□□□ 1.17
NEK3-208ENST00000618534 HMGB1P1B2RPK0 211 aaPredicted RBP22.34■■□□□ 1.17
NEK3-208ENST00000618534 CES2O00748 559 aa22.34■■□□□ 1.17
NEK3-208ENST00000618534 CEP104O60308 925 aa22.34■■□□□ 1.17
NEK3-208ENST00000618534 PPP1R37O75864 691 aa22.34■■□□□ 1.17
NEK3-208ENST00000618534 PTGISQ16647 500 aa22.34■■□□□ 1.17
NEK3-208ENST00000618534 KCTD1Q719H9 257 aa22.34■■□□□ 1.17
NEK3-208ENST00000618534 SPAG5Q96R06 1193 aa22.34■■□□□ 1.17
NEK3-208ENST00000618534 ATF5Q9Y2D1 282 aaPredicted RBP22.34■■□□□ 1.17
NEK3-208ENST00000618534 FRMD3A2A2Y4 597 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 POTEFA5A3E0 1075 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 USP17L15C9J2P7 530 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 USP17L13C9JLJ4 530 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 USP17L11C9JVI0 530 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 USP17L18D6R9N7 530 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 USP17L22D6RA61 530 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 USP17L17D6RBQ6 530 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 USP17L19D6RCP7 530 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 USP17L20D6RJB6 530 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 POTEIP0CG38 1075 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 UCHL3P15374 230 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 USP17L24Q0WX57 530 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 ITGB3BPQ13352 177 aaPredicted RBP22.33■■□□□ 1.17
NEK3-208ENST00000618534 USP17L6PQ6QN14 398 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 POTEGQ6S5H5 508 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 POTEEQ6S8J3 1075 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 PPP4R3CPQ6ZMV5 832 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 LRRC57Q8N9N7 239 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 PROCA1Q8NCQ7 364 aaPredicted RBP22.33■■□□□ 1.17
NEK3-208ENST00000618534 SCFD2Q8WU76 684 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 GGA1Q9UJY5 639 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 ATXN2Q99700 1313 aaKnown RBP22.33■■□□□ 1.17
NEK3-208ENST00000618534 ZBTB5O15062 677 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 SEC24CP53992 1094 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 SLC12A3P55017 1021 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 DDX42Q86XP3 938 aaKnown RBP eCLIP22.33■■□□□ 1.17
NEK3-208ENST00000618534 SUGP1Q8IWZ8 645 aaKnown RBP22.33■■□□□ 1.17
NEK3-208ENST00000618534 C1orf131Q8NDD1 294 aaKnown RBP22.33■■□□□ 1.17
NEK3-208ENST00000618534 AP1M1Q9BXS5 423 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 PLCB1Q9NQ66 1216 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 NAGPAQ9UK23 515 aa22.33■■□□□ 1.17
NEK3-208ENST00000618534 CCNL1Q9UK58 526 aaPredicted RBP22.33■■□□□ 1.17
NEK3-208ENST00000618534 ATP2B4P23634 1241 aa22.32■■□□□ 1.16
NEK3-208ENST00000618534 HSD17B3P37058 310 aa22.32■■□□□ 1.16
NEK3-208ENST00000618534 MDH1P40925 334 aaKnown RBP22.32■■□□□ 1.16
NEK3-208ENST00000618534 KCTD19Q17RG1 926 aaPredicted RBP22.32■■□□□ 1.16
NEK3-208ENST00000618534 C10orf76Q5T2E6 689 aa22.32■■□□□ 1.16
NEK3-208ENST00000618534 ZNF473Q8WTR7 871 aaKnown RBP22.32■■□□□ 1.16
NEK3-208ENST00000618534 RPGRQ92834 1020 aaKnown RBP22.32■■□□□ 1.16
NEK3-208ENST00000618534 PBKQ96KB5 322 aa22.32■■□□□ 1.16
NEK3-208ENST00000618534 DHX36Q9H2U1 1008 aaKnown RBP22.32■■□□□ 1.16
NEK3-208ENST00000618534 TMBIM4Q9HC24 238 aa22.32■■□□□ 1.16
NEK3-208ENST00000618534 ARMCX3Q9UH62 379 aaPredicted RBP22.32■■□□□ 1.16
NEK3-208ENST00000618534 RBM46Q8TBY0 533 aaKnown RBP22.32■■□□□ 1.16
NEK3-208ENST00000618534 KCNMB3Q9NPA1 279 aa22.32■■□□□ 1.16
NEK3-208ENST00000618534 DDX4Q9NQI0 724 aaKnown RBP22.32■■□□□ 1.16
NEK3-208ENST00000618534 KIF13BQ9NQT8 1826 aa22.32■■□□□ 1.16
NEK3-208ENST00000618534 KIAA0754O94854 1291 aa22.31■■□□□ 1.16
NEK3-208ENST00000618534 HPDP32754 393 aaPredicted RBP22.31■■□□□ 1.16
NEK3-208ENST00000618534 UAP1Q16222 522 aaPredicted RBP22.31■■□□□ 1.16
NEK3-208ENST00000618534 ALKBH5Q6P6C2 394 aaKnown RBP22.31■■□□□ 1.16
NEK3-208ENST00000618534 OR2W6PQ8NHA6 318 aa22.31■■□□□ 1.16
NEK3-208ENST00000618534 ACTRT1Q8TDG2 376 aa22.31■■□□□ 1.16
NEK3-208ENST00000618534 CENPHQ9H3R5 247 aa22.31■■□□□ 1.16
NEK3-208ENST00000618534 MEFVO15553 781 aaPredicted RBP22.31■■□□□ 1.16
NEK3-208ENST00000618534 AFPP02771 609 aaKnown RBP22.31■■□□□ 1.16
NEK3-208ENST00000618534 ZBTB48P10074 688 aaPredicted RBP22.31■■□□□ 1.16
NEK3-208ENST00000618534 PON1P27169 355 aa22.31■■□□□ 1.16
NEK3-208ENST00000618534 RFC4P35249 363 aa22.31■■□□□ 1.16
NEK3-208ENST00000618534 OTUD6BQ8N6M0 293 aa22.31■■□□□ 1.16
NEK3-208ENST00000618534 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.31■■□□□ 1.16
NEK3-208ENST00000618534 NEUROG2Q9H2A3 272 aa22.31■■□□□ 1.16
NEK3-208ENST00000618534 AJAP1Q9UKB5 411 aaPredicted RBP22.31■■□□□ 1.16
NEK3-208ENST00000618534 NOC2LQ9Y3T9 749 aaKnown RBP22.31■■□□□ 1.16
NEK3-208ENST00000618534 PITPNM2Q9BZ72 1349 aa22.31■■□□□ 1.16
NEK3-208ENST00000618534 CUL1Q13616 776 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 EXOC3L4Q17RC7 722 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 KCNV1Q6PIU1 500 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 FRMD5Q7Z6J6 570 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 NLRP14Q86W24 1093 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 SPATS2Q86XZ4 545 aaKnown RBP22.3■■□□□ 1.16
NEK3-208ENST00000618534 METTL13Q8N6R0 699 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 TPCN2Q8NHX9 752 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 MYCBPAPQ8TBZ2 947 aa22.3■■□□□ 1.16
NEK3-208ENST00000618534 DDX47Q9H0S4 455 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms