RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 COLGALT1Q8NBJ5 622 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 MRPS27Q92552 414 aaKnown RBP5.35□□□□□ -1.55
SNCA-213ENST00000618500 SPATA33Q96N06 139 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 INPP4AQ96PE3 977 aaPredicted RBP5.35□□□□□ -1.55
SNCA-213ENST00000618500 GPR20Q99678 358 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 PDCD2LQ9BRP1 358 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 NAPBQ9H115 298 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 TUT1Q9H6E5 874 aaKnown RBP5.35□□□□□ -1.55
SNCA-213ENST00000618500 ZBTB40Q9NUA8 1239 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 WNT16Q9UBV4 365 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 FBXO4Q9UKT5 387 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 PCDHB12Q9Y5F1 795 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 IRAK3Q9Y616 596 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 MRVI1Q9Y6F6 885 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 RRN3P2A6NIE6 340 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 H0Y858 1186 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 HOXA2O43364 376 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 FOXD2O60548 495 aaPredicted RBP5.34□□□□□ -1.55
SNCA-213ENST00000618500 LRP3O75074 770 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 NR3C2P08235 984 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 C7P10643 843 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 FAM189BP81408 668 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 MRPS6P82932 125 aaKnown RBP5.34□□□□□ -1.55
SNCA-213ENST00000618500 PGM5Q15124 567 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 ANGPT1Q15389 498 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 SIRT2Q8IXJ6 389 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 FTSJ3Q8IY81 847 aaKnown RBP5.34□□□□□ -1.55
SNCA-213ENST00000618500 KLHL23Q8NBE8 558 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 RNF25Q96BH1 459 aaPredicted RBP5.34□□□□□ -1.55
SNCA-213ENST00000618500 TAAR1Q96RJ0 339 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 RMDN3Q96TC7 470 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 ALG1Q9BT22 464 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 OSBPL6Q9BZF3 934 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 LRRCC1Q9C099 1032 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 TLE6Q9H808 572 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 IL1RAPL2Q9NP60 686 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 TRPV2Q9Y5S1 764 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 IGSF9BQ9UPX0 1349 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 MTCL1Q9Y4B5 1905 aaKnown RBP5.34□□□□□ -1.55
SNCA-213ENST00000618500 TREHO43280 583 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 FIBPO43427 364 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 LILRB5O75023 590 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 EOMESO95936 686 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 CDC37Q16543 378 aaPredicted RBP5.34□□□□□ -1.55
SNCA-213ENST00000618500 ARHGEF16Q5VV41 709 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 TTBK2Q6IQ55 1244 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 HDAC7Q8WUI4 952 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 TNPO1Q92973 898 aaKnown RBP5.34□□□□□ -1.55
SNCA-213ENST00000618500 HELLSQ9NRZ9 838 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 RGS18Q9NS28 235 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 IGSF9Q9P2J2 1179 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 BARX2Q9UMQ3 279 aaPredicted RBP5.34□□□□□ -1.55
SNCA-213ENST00000618500 DDX19BQ9UMR2 479 aa5.34□□□□□ -1.55
SNCA-213ENST00000618500 KAT6AQ92794 2004 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 OPLAHO14841 1288 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 BRD1O95696 1058 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 SCG2P13521 617 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 GTF2F1P35269 517 aaKnown RBP eCLIP5.34□□□□□ -1.56
SNCA-213ENST00000618500 SLC4A3P48751 1232 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 SHC2P98077 582 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 ZNF200P98182 395 aaPredicted RBP5.34□□□□□ -1.56
SNCA-213ENST00000618500 LMNB2Q03252 620 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 SMC1AQ14683 1233 aaKnown RBP5.34□□□□□ -1.56
SNCA-213ENST00000618500 ST3GAL2Q16842 350 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 KIAA0319Q5VV43 1072 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 ITPRIPQ8IWB1 547 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 HS6ST3Q8IZP7 471 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 SLC22A17Q8WUG5 538 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 LMBR1Q8WVP7 490 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 SLC39A7Q92504 469 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 CWH43Q9H720 699 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 C1orf115Q9H7X2 142 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 ERVK-5Q9HDB9 667 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 SCUBE2Q9NQ36 999 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 DLGAP2Q9P1A6 1054 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 EPS15L1Q9UBC2 864 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 PCDHA2Q9Y5H9 948 aa5.34□□□□□ -1.56
SNCA-213ENST00000618500 DDX49Q9Y6V7 483 aaKnown RBP5.34□□□□□ -1.56
SNCA-213ENST00000618500 WDR81Q562E7 1941 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 CACNA1AO00555 2505 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 C2CD4DB7Z1M9 353 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 KDM4AO75164 1064 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 GGPS1O95749 300 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 POU2F2P09086 479 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 RLBP1P12271 317 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 CLUL1Q15846 466 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 GNPTABQ3T906 1256 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 SLFNL1Q499Z3 407 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 SEPT14Q6ZU15 432 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 GPR65Q8IYL9 337 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 RUBCNQ92622 972 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 EPC1Q9H2F5 836 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 RNPEPQ9H4A4 650 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 SLC2A4RGQ9NR83 387 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 XIRP2A4UGR9 3374 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 ZMYM2Q9UBW7 1377 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 SALL3Q9BXA9 1300 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 SMIM35A0A1B0GVV1 85 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 PIK3CDO00329 1044 aa5.33□□□□□ -1.56
SNCA-213ENST00000618500 HSDL1Q3SXM5 330 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms