RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 PDXDC1Q6P996 788 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 WDR75Q8IWA0 830 aaKnown RBP11.06□□□□□ -0.64
CUL4A-212ENST00000617546 WNT8AQ9H1J5 351 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 TEX33O43247 280 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 SRGNP10124 158 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 ACADSP16219 412 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 YWHAGP61981 247 aaKnown RBP eCLIP11.06□□□□□ -0.64
CUL4A-212ENST00000617546 NFRKBQ6P4R8 1299 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 GUF1Q8N442 669 aaKnown RBP11.06□□□□□ -0.64
CUL4A-212ENST00000617546 HINFPQ9BQA5 517 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 LRRC1Q9BTT6 524 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 FBXL5Q9UKA1 691 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 WDR17Q8IZU2 1322 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 PRCPP42785 496 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 SNX1Q13596 522 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 CUL4BQ13620 913 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 GNPTABQ3T906 1256 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 FAM47AQ5JRC9 791 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 TRPM8Q7Z2W7 1104 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 STAG2Q8N3U4 1231 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 RBM17Q96I25 401 aaKnown RBP11.06□□□□□ -0.64
CUL4A-212ENST00000617546 NBPF3Q9H094 633 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 ISCUQ9H1K1 167 aa11.06□□□□□ -0.64
CUL4A-212ENST00000617546 PLEKHG2Q9H7P9 1386 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 CDHR2Q9BYE9 1310 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 PHKG2P15735 406 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 ATF7P17544 494 aaPredicted RBP11.05□□□□□ -0.64
CUL4A-212ENST00000617546 RANBP1P43487 201 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 SLCO1A2P46721 670 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 KRT81Q14533 505 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 GRAMD4Q6IC98 578 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 CYB5D1Q6P9G0 228 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 CCDC125Q86Z20 511 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 CHMP2AO43633 222 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 PLS3P13797 630 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 PPARDQ03181 441 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 CMTR1Q8N1G2 835 aaKnown RBP11.05□□□□□ -0.64
CUL4A-212ENST00000617546 DPF2Q92785 391 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 ACCSQ96QU6 501 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 ZSWIM5Q9P217 1185 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 SAP30BPQ9UHR5 308 aaKnown RBP11.05□□□□□ -0.64
CUL4A-212ENST00000617546 GGA2Q9UJY4 613 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 CDC42BPAQ5VT25 1732 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 RASA4BC9J798 803 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 RASA4O43374 803 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 KRT37O76014 449 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 RPS6KA2Q15349 733 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 CHRNA2Q15822 529 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 MMEL1Q495T6 779 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 GSPT2Q8IYD1 628 aaKnown RBP11.05□□□□□ -0.64
CUL4A-212ENST00000617546 RIBC1Q8N443 379 aaPredicted RBP11.05□□□□□ -0.64
CUL4A-212ENST00000617546 TTC13Q8NBP0 860 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 SYN2Q92777 582 aaPredicted RBP11.05□□□□□ -0.64
CUL4A-212ENST00000617546 SPHKAPQ2M3C7 1700 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 K7ENM7 598 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 DAPK3O43293 454 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 VPS41P49754 854 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 PTPN21Q16825 1174 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 MLXIPQ9HAP2 919 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 ADAMTS1Q9UHI8 967 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 FBXO2Q9UK22 296 aaPredicted RBP11.05□□□□□ -0.64
CUL4A-212ENST00000617546 PAIP2BQ9ULR5 123 aaKnown RBP11.05□□□□□ -0.64
CUL4A-212ENST00000617546 CPDO75976 1380 aa11.05□□□□□ -0.64
CUL4A-212ENST00000617546 SGK1O00141 431 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 MCF2P10911 925 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 RASA3Q14644 834 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 RNF207Q6ZRF8 634 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 SMCR8Q8TEV9 937 aaPredicted RBP11.04□□□□□ -0.64
CUL4A-212ENST00000617546 FAM212AQ96EL1 285 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 RBM41Q96IZ5 413 aaKnown RBP11.04□□□□□ -0.64
CUL4A-212ENST00000617546 TEKT3Q9BXF9 490 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 ZC3H12CQ9C0D7 883 aaKnown RBP11.04□□□□□ -0.64
CUL4A-212ENST00000617546 KIAA1024Q9UPX6 916 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 NCKAP5LQ9HCH0 1330 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 BACH1O14867 736 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 BRAFP15056 766 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 ZFXP17010 805 aaPredicted RBP11.04□□□□□ -0.64
CUL4A-212ENST00000617546 STX1BP61266 288 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 DNAL1Q4LDG9 190 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 TRAPPC11Q7Z392 1133 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 TPH2Q8IWU9 490 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 UPF3AQ9H1J1 476 aaKnown RBP11.04□□□□□ -0.64
CUL4A-212ENST00000617546 CLTCL1P53675 1640 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 HARSP12081 509 aaKnown RBP11.04□□□□□ -0.64
CUL4A-212ENST00000617546 ARL4CP56559 192 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 ATP2C1P98194 919 aaPredicted RBP11.04□□□□□ -0.64
CUL4A-212ENST00000617546 RCSD1Q6JBY9 416 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 PDIK1LQ8N165 341 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 PPM1KQ8N3J5 372 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 GPKOWQ92917 476 aaPredicted RBP eCLIP11.04□□□□□ -0.64
CUL4A-212ENST00000617546 IL17RAQ96F46 866 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 BRIP1Q9BX63 1249 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 NOD2Q9HC29 1040 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 HDAC6Q9UBN7 1215 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 EFCAB6Q5THR3 1501 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 ZNF189O75820 626 aaPredicted RBP11.04□□□□□ -0.64
CUL4A-212ENST00000617546 GPC5P78333 572 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 CDK17Q00537 523 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 DGKHQ86XP1 1220 aa11.04□□□□□ -0.64
CUL4A-212ENST00000617546 ICA1LQ8NDH6 482 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms