RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 EFCAB13Q8IY85 973 aa20.16■□□□□ 0.82
GABPB1-212ENST00000615671 MASTLQ96GX5 879 aa20.16■□□□□ 0.82
GABPB1-212ENST00000615671 CDHR1Q96JP9 859 aa20.16■□□□□ 0.82
GABPB1-212ENST00000615671 SLC7A5P2Q9GIP4 190 aa20.16■□□□□ 0.82
GABPB1-212ENST00000615671 RRAGDQ9NQL2 400 aaPredicted RBP20.16■□□□□ 0.82
GABPB1-212ENST00000615671 GINM1Q9NU53 330 aa20.16■□□□□ 0.82
GABPB1-212ENST00000615671 AFF4Q9UHB7 1163 aaKnown RBP20.16■□□□□ 0.82
GABPB1-212ENST00000615671 CIAO1O76071 339 aa20.16■□□□□ 0.82
GABPB1-212ENST00000615671 PLEKHA8P1O95397 391 aa20.16■□□□□ 0.82
GABPB1-212ENST00000615671 NGRNQ9NPE2 291 aaKnown RBP20.16■□□□□ 0.82
GABPB1-212ENST00000615671 PER1O15534 1290 aaPredicted RBP20.16■□□□□ 0.82
GABPB1-212ENST00000615671 ECEL1O95672 775 aa20.16■□□□□ 0.82
GABPB1-212ENST00000615671 PPP2R5EQ16537 467 aa20.16■□□□□ 0.82
GABPB1-212ENST00000615671 TRMT10CQ7L0Y3 403 aaKnown RBP20.16■□□□□ 0.82
GABPB1-212ENST00000615671 PIGBQ92521 554 aa20.16■□□□□ 0.82
GABPB1-212ENST00000615671 AIFM3Q96NN9 605 aa20.16■□□□□ 0.82
GABPB1-212ENST00000615671 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.16■□□□□ 0.82
GABPB1-212ENST00000615671 ARL13BQ3SXY8 428 aa20.16■□□□□ 0.82
GABPB1-212ENST00000615671 RSBN1LQ6PCB5 846 aaPredicted RBP20.16■□□□□ 0.82
GABPB1-212ENST00000615671 RHPN2Q8IUC4 686 aa20.16■□□□□ 0.82
GABPB1-212ENST00000615671 DHX36Q9H2U1 1008 aaKnown RBP20.16■□□□□ 0.82
GABPB1-212ENST00000615671 PCDHA5Q9Y5H7 936 aa20.16■□□□□ 0.82
GABPB1-212ENST00000615671 PHLDB3Q6NSJ2 640 aa20.15■□□□□ 0.82
GABPB1-212ENST00000615671 ELMSAN1Q6PJG2 1045 aa20.15■□□□□ 0.82
GABPB1-212ENST00000615671 SNRNP48Q6IEG0 339 aaKnown RBP20.15■□□□□ 0.82
GABPB1-212ENST00000615671 THOC1Q96FV9 657 aaKnown RBP20.15■□□□□ 0.82
GABPB1-212ENST00000615671 ORC6Q9Y5N6 252 aa20.15■□□□□ 0.82
GABPB1-212ENST00000615671 BIVM-ERCC5R4GMW8 1640 aa20.15■□□□□ 0.82
GABPB1-212ENST00000615671 USP17L5A8MUK1 530 aa20.15■□□□□ 0.82
GABPB1-212ENST00000615671 TCP1P17987 556 aaKnown RBP20.15■□□□□ 0.82
GABPB1-212ENST00000615671 MRPS25P82663 173 aaKnown RBP20.15■□□□□ 0.82
GABPB1-212ENST00000615671 TMTC3Q6ZXV5 915 aa20.15■□□□□ 0.82
GABPB1-212ENST00000615671 FOXP1Q9H334 677 aaPredicted RBP20.15■□□□□ 0.82
GABPB1-212ENST00000615671 ZSWIM5Q9P217 1185 aa20.15■□□□□ 0.82
GABPB1-212ENST00000615671 SUFUQ9UMX1 484 aa20.15■□□□□ 0.82
GABPB1-212ENST00000615671 CYP21A2P08686 494 aa20.15■□□□□ 0.82
GABPB1-212ENST00000615671 ABCC12Q96J65 1359 aa20.15■□□□□ 0.82
GABPB1-212ENST00000615671 KDM5AP29375 1690 aaKnown RBP20.15■□□□□ 0.82
GABPB1-212ENST00000615671 HNRNPCL2B2RXH8 293 aa20.15■□□□□ 0.82
GABPB1-212ENST00000615671 HNRNPCL1O60812 293 aaKnown RBP20.15■□□□□ 0.82
GABPB1-212ENST00000615671 TRPA1O75762 1119 aa20.15■□□□□ 0.82
GABPB1-212ENST00000615671 STMN1P16949 149 aa20.15■□□□□ 0.82
GABPB1-212ENST00000615671 KIF19Q2TAC6 998 aa20.15■□□□□ 0.82
GABPB1-212ENST00000615671 SCYL3Q8IZE3 742 aa20.15■□□□□ 0.82
GABPB1-212ENST00000615671 MYRIPQ8NFW9 859 aa20.15■□□□□ 0.82
GABPB1-212ENST00000615671 TRIM11Q96F44 468 aa20.15■□□□□ 0.82
GABPB1-212ENST00000615671 PCDHB6Q9Y5E3 794 aa20.15■□□□□ 0.82
GABPB1-212ENST00000615671 MXI1P50539 228 aa20.14■□□□□ 0.82
GABPB1-212ENST00000615671 IL9RQ01113 521 aa20.14■□□□□ 0.82
GABPB1-212ENST00000615671 KCNA1Q09470 495 aa20.14■□□□□ 0.82
GABPB1-212ENST00000615671 MTMR1Q13613 665 aa20.14■□□□□ 0.82
GABPB1-212ENST00000615671 BBS9Q3SYG4 887 aa20.14■□□□□ 0.82
GABPB1-212ENST00000615671 ZNF658Q5TYW1 1059 aaPredicted RBP20.14■□□□□ 0.82
GABPB1-212ENST00000615671 LAD1O00515 517 aa20.14■□□□□ 0.81
GABPB1-212ENST00000615671 MYL1P05976 194 aa20.14■□□□□ 0.81
GABPB1-212ENST00000615671 LMNB2Q03252 620 aa20.14■□□□□ 0.81
GABPB1-212ENST00000615671 STK17AQ9UEE5 414 aa20.14■□□□□ 0.81
GABPB1-212ENST00000615671 RECQLP46063 649 aaPredicted RBP20.14■□□□□ 0.81
GABPB1-212ENST00000615671 ZNF445P59923 1031 aa20.14■□□□□ 0.81
GABPB1-212ENST00000615671 SLC7A5Q01650 507 aa20.14■□□□□ 0.81
GABPB1-212ENST00000615671 TRIML1Q8N9V2 468 aa20.14■□□□□ 0.81
GABPB1-212ENST00000615671 SNX19Q92543 992 aa20.14■□□□□ 0.81
GABPB1-212ENST00000615671 INTS9Q9NV88 658 aaKnown RBP20.14■□□□□ 0.81
GABPB1-212ENST00000615671 SOWAHDA6NJG2 315 aa20.14■□□□□ 0.81
GABPB1-212ENST00000615671 ZBED1O96006 694 aa20.14■□□□□ 0.81
GABPB1-212ENST00000615671 ERICH1Q86X53 443 aa20.14■□□□□ 0.81
GABPB1-212ENST00000615671 IFT43Q96FT9 208 aa20.14■□□□□ 0.81
GABPB1-212ENST00000615671 GPT2Q8TD30 523 aa20.14■□□□□ 0.81
GABPB1-212ENST00000615671 OSBP2Q969R2 916 aa20.14■□□□□ 0.81
GABPB1-212ENST00000615671 FAF2Q96CS3 445 aa20.14■□□□□ 0.81
GABPB1-212ENST00000615671 TSPYL2Q9H2G4 693 aaPredicted RBP20.14■□□□□ 0.81
GABPB1-212ENST00000615671 APOEP02649 317 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 CIITAP33076 1130 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 STAG1Q8WVM7 1258 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 DAAM1Q9Y4D1 1078 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 GOLGA8MH3BSY2 632 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 MXD4Q14582 209 aaPredicted RBP20.13■□□□□ 0.81
GABPB1-212ENST00000615671 RASEFQ8IZ41 740 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 RNF26Q9BY78 433 aaPredicted RBP20.13■□□□□ 0.81
GABPB1-212ENST00000615671 PDE11AQ9HCR9 933 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 PNMA6FA0A0J9YX94 578 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 MOCS2O96007 188 aaPredicted RBP20.13■□□□□ 0.81
GABPB1-212ENST00000615671 MMP1P03956 469 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 NME3Q13232 169 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 HLFQ16534 295 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 URGCPQ8TCY9 931 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 MMP19Q99542 508 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 PALLDQ8WX93 1383 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 TRAPPC10P48553 1259 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 FAM133BQ5BKY9 247 aaKnown RBP20.13■□□□□ 0.81
GABPB1-212ENST00000615671 PPP1R13BQ96KQ4 1090 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 BHMT2Q9H2M3 363 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 ZFYVE16Q7Z3T8 1539 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 EIF3CLB5ME19 914 aaKnown RBP20.13■□□□□ 0.81
GABPB1-212ENST00000615671 LIG3P49916 1009 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 DPCR1Q3MIW9 517 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 MARCH10Q8NA82 808 aaPredicted RBP20.13■□□□□ 0.81
GABPB1-212ENST00000615671 MAML1Q92585 1016 aa20.13■□□□□ 0.81
GABPB1-212ENST00000615671 EIF3CQ99613 913 aaKnown RBP20.13■□□□□ 0.81
GABPB1-212ENST00000615671 ABCC2Q92887 1545 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms