RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 TLK2Q86UE8 772 aa8.48□□□□□ -1.05
FAM228B-209ENST00000615135 TBC1D10CQ8IV04 446 aa8.48□□□□□ -1.05
FAM228B-209ENST00000615135 CCDC144CPQ8IYA2 1237 aa8.48□□□□□ -1.05
FAM228B-209ENST00000615135 MB21D2Q8IYB1 491 aaPredicted RBP8.48□□□□□ -1.05
FAM228B-209ENST00000615135 SPICE1Q8N0Z3 855 aa8.48□□□□□ -1.05
FAM228B-209ENST00000615135 RETREG2Q8NC44 543 aa8.48□□□□□ -1.05
FAM228B-209ENST00000615135 NSUN7Q8NE18 718 aaKnown RBP8.48□□□□□ -1.05
FAM228B-209ENST00000615135 SPATA32Q96LK8 384 aa8.48□□□□□ -1.05
FAM228B-209ENST00000615135 FTOQ9C0B1 505 aaKnown RBP eCLIP8.48□□□□□ -1.05
FAM228B-209ENST00000615135 AP5M1Q9H0R1 490 aa8.48□□□□□ -1.05
FAM228B-209ENST00000615135 SH2D4AQ9H788 454 aa8.48□□□□□ -1.05
FAM228B-209ENST00000615135 ARMT1Q9H993 441 aa8.48□□□□□ -1.05
FAM228B-209ENST00000615135 TLR9Q9NR96 1032 aa8.48□□□□□ -1.05
FAM228B-209ENST00000615135 FBXO28Q9NVF7 368 aa8.48□□□□□ -1.05
FAM228B-209ENST00000615135 TMEM63CQ9P1W3 806 aa8.48□□□□□ -1.05
FAM228B-209ENST00000615135 MTUS1Q9ULD2 1270 aa8.48□□□□□ -1.05
FAM228B-209ENST00000615135 RIPK3Q9Y572 518 aa8.48□□□□□ -1.05
FAM228B-209ENST00000615135 NEDD4P46934 1319 aa8.48□□□□□ -1.05
FAM228B-209ENST00000615135 TRIP12Q14669 1992 aaPredicted RBP8.48□□□□□ -1.05
FAM228B-209ENST00000615135 SCN10AQ9Y5Y9 1956 aa8.48□□□□□ -1.05
FAM228B-209ENST00000615135 MAGEB6P1A0A0J9YX57 407 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 ABHD14A-ACY1A0A1B0GW23 586 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 CCDC69A6NI79 296 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 GOLGA8AA7E2F4 631 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 LOC730098B7Z3J9 87 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 H3BNC9 293 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 DYNC1LI2O43237 492 aaPredicted RBP8.47□□□□□ -1.05
FAM228B-209ENST00000615135 DTNBO60941 627 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 LETM1O95202 739 aaPredicted RBP8.47□□□□□ -1.05
FAM228B-209ENST00000615135 XRCC6P12956 609 aaKnown RBP eCLIP8.47□□□□□ -1.05
FAM228B-209ENST00000615135 SMPD1P17405 629 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 CYP7A1P22680 504 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 CTHP32929 405 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 USP5P45974 858 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 METAP2P50579 478 aaKnown RBP eCLIP8.47□□□□□ -1.05
FAM228B-209ENST00000615135 DEFB103AP81534 67 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 SMAD4Q13485 552 aaKnown RBP8.47□□□□□ -1.05
FAM228B-209ENST00000615135 BFSP2Q13515 415 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 RRP12Q5JTH9 1297 aaKnown RBP8.47□□□□□ -1.05
FAM228B-209ENST00000615135 IQSEC1Q6DN90 963 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 TMED8Q6PL24 325 aaPredicted RBP8.47□□□□□ -1.05
FAM228B-209ENST00000615135 SYNE3Q6ZMZ3 975 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 TMCO2Q7Z6W1 182 aaPredicted RBP8.47□□□□□ -1.05
FAM228B-209ENST00000615135 CNTNAP3BQ96NU0 1288 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 SAMD11Q96NU1 681 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 C17orf80Q9BSJ5 609 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 CNTNAP3Q9BZ76 1288 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 KRT23Q9C075 422 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 SCAND2PQ9GZW5 306 aaPredicted RBP8.47□□□□□ -1.05
FAM228B-209ENST00000615135 RNF41Q9H4P4 317 aaPredicted RBP8.47□□□□□ -1.05
FAM228B-209ENST00000615135 ZSCAN16Q9H4T2 348 aaPredicted RBP8.47□□□□□ -1.05
FAM228B-209ENST00000615135 NSUN3Q9H649 340 aaKnown RBP8.47□□□□□ -1.05
FAM228B-209ENST00000615135 NCOA5Q9HCD5 579 aaKnown RBP8.47□□□□□ -1.05
FAM228B-209ENST00000615135 ARHGEF10LQ9HCE6 1279 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 SLC4A4Q9Y6R1 1079 aa8.47□□□□□ -1.05
FAM228B-209ENST00000615135 TCRBV5S4A2TA0A5A2 114 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 B4E1Z4 1266 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 STXBP3O00186 592 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 EFCAB14O75071 495 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 GADD45BO75293 160 aaPredicted RBP8.46□□□□□ -1.06
FAM228B-209ENST00000615135 PARNO95453 639 aaKnown RBP8.46□□□□□ -1.06
FAM228B-209ENST00000615135 FGAP02671 866 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 CXCL10P02778 98 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 HTRA4P83105 476 aaPredicted RBP8.46□□□□□ -1.06
FAM228B-209ENST00000615135 PURAQ00577 322 aaKnown RBP8.46□□□□□ -1.06
FAM228B-209ENST00000615135 PTPN11Q06124 597 aaPredicted RBP8.46□□□□□ -1.06
FAM228B-209ENST00000615135 RESTQ13127 1097 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 TRIM29Q14134 588 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 SNRNP48Q6IEG0 339 aaKnown RBP8.46□□□□□ -1.06
FAM228B-209ENST00000615135 NFRKBQ6P4R8 1299 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 CNKSR3Q6P9H4 555 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 DGLUCYQ7Z3D6 616 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 RPAINQ86UA6 219 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 MICU3Q86XE3 530 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 RAB11FIP4Q86YS3 637 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 ADSSL1Q8N142 457 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 LCORLQ8N3X6 602 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 FAM133AQ8N9E0 248 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 MIGA1Q8NAN2 632 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 SMARCC2Q8TAQ2 1214 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 NKD2Q969F2 451 aaPredicted RBP8.46□□□□□ -1.06
FAM228B-209ENST00000615135 ZNF274Q96GC6 653 aaPredicted RBP8.46□□□□□ -1.06
FAM228B-209ENST00000615135 C8orf76Q96K31 380 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 TMEM87BQ96K49 555 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 ZNF396Q96N95 335 aaPredicted RBP8.46□□□□□ -1.06
FAM228B-209ENST00000615135 NUP62CLQ9H1M0 184 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 EPB41L4AQ9HCS5 686 aaPredicted RBP8.46□□□□□ -1.06
FAM228B-209ENST00000615135 CLDND1Q9NY35 253 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 INSL6Q9Y581 213 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 MAP1BP46821 2468 aaKnown RBP8.46□□□□□ -1.06
FAM228B-209ENST00000615135 MYO15AQ9UKN7 3530 aa8.46□□□□□ -1.06
FAM228B-209ENST00000615135 MPHOSPH10O00566 681 aaKnown RBP8.45□□□□□ -1.06
FAM228B-209ENST00000615135 SH2B2O14492 632 aaPredicted RBP8.45□□□□□ -1.06
FAM228B-209ENST00000615135 FOXP2O15409 715 aa8.45□□□□□ -1.06
FAM228B-209ENST00000615135 DXOO77932 396 aaKnown RBP8.45□□□□□ -1.06
FAM228B-209ENST00000615135 EYA4O95677 639 aa8.45□□□□□ -1.06
FAM228B-209ENST00000615135 EXOSC10Q01780 885 aaKnown RBP8.45□□□□□ -1.06
FAM228B-209ENST00000615135 ICA1Q05084 483 aa8.45□□□□□ -1.06
FAM228B-209ENST00000615135 DLX2Q07687 328 aaPredicted RBP8.45□□□□□ -1.06
FAM228B-209ENST00000615135 RBL2Q08999 1139 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms