RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 NAXEQ8NCW5 288 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 RASSF8Q8NHQ8 419 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 DEPTORQ8TB45 409 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 FNIP1Q8TF40 1166 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 EDARADDQ8WWZ3 215 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 CDKL2Q92772 493 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 NXPE3Q969Y0 559 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 EGLN2Q96KS0 407 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 PSKH2Q96QS6 385 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 SARGQ9BW04 601 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 STK31Q9BXU1 1019 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 CDH19Q9H159 772 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 DNAJC18Q9H819 358 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 KCNQ5Q9NR82 932 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 LRRC4BQ9NT99 713 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 FBXL5Q9UKA1 691 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 MYO6Q9UM54 1294 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 MAGED1Q9Y5V3 778 aaPredicted RBP3.34□□□□□ -1.87
CBWD3-209ENST00000614377 SNCAIPQ9Y6H5 919 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 RTEL1-TNFRSF6BF6WH68 1400 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 ATP5J2-PTCD1G3V325 749 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 ELL2O00472 640 aaPredicted RBP3.34□□□□□ -1.87
CBWD3-209ENST00000614377 TEX28O15482 410 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 TREHO43280 583 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 AKAP10O43572 662 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 GPR37L1O60883 481 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 ERLIN2O94905 339 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 FBXO21O94952 628 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 CAVIN2O95810 425 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 CCDC166P0CW27 439 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 POU3F3P20264 500 aaPredicted RBP3.34□□□□□ -1.87
CBWD3-209ENST00000614377 MTHFRP42898 656 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 NR2C2P49116 596 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 DGKGP49619 791 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 RENBPP51606 427 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 PLOD1Q02809 727 aaPredicted RBP3.34□□□□□ -1.87
CBWD3-209ENST00000614377 PTPN12Q05209 780 aaKnown RBP3.34□□□□□ -1.87
CBWD3-209ENST00000614377 TRIM28Q13263 835 aaKnown RBP3.34□□□□□ -1.87
CBWD3-209ENST00000614377 PSMD6Q15008 389 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 ELF2Q15723 593 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 CCDC57Q2TAC2 916 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 NDUFAF5Q5TEU4 345 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 METTL11BQ5VVY1 283 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 SPATA1Q5VX52 437 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 LARP1Q6PKG0 1096 aaKnown RBP3.34□□□□□ -1.87
CBWD3-209ENST00000614377 LRRTM3Q86VH5 581 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 CHAC2Q8WUX2 184 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 SPDL1Q96EA4 605 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 DDX11Q96FC9 970 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 COG3Q96JB2 828 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 CABS1Q96KC9 395 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 CEP295NLQ96MC4 621 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 FAM161BQ96MY7 647 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 BICC1Q9H694 974 aaKnown RBP3.34□□□□□ -1.87
CBWD3-209ENST00000614377 SRA1Q9HD15 236 aaKnown RBP3.34□□□□□ -1.87
CBWD3-209ENST00000614377 SLC39A2Q9NP94 309 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 SCHIP1Q9P0W5 487 aaPredicted RBP3.34□□□□□ -1.87
CBWD3-209ENST00000614377 CIDEBQ9UHD4 219 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 EXOC6BQ9Y2D4 811 aa3.34□□□□□ -1.87
CBWD3-209ENST00000614377 USP31Q70CQ4 1352 aa3.34□□□□□ -1.88
CBWD3-209ENST00000614377 ZNF536O15090 1300 aa3.34□□□□□ -1.88
CBWD3-209ENST00000614377 CLRN2A0PK11 232 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 CCDC162PA2VCL2 907 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 HTR3EA5X5Y0 456 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 A6NHS1 94 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 CYTH3O43739 400 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 MYCP01106 439 aaPredicted RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 GNRH1P01148 92 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 S100A6P06703 90 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 PARP1P09874 1014 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 KRT10P13645 584 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 ZAP70P43403 619 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 PSMC4P43686 418 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 GNAQP50148 359 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 SMTNP53814 917 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 RARSP54136 660 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 ZNF280AP59817 542 aaPredicted RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 TMF1P82094 1093 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 DR1Q01658 176 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 FKBP4Q02790 459 aaKnown RBP eCLIP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 ZNF211Q13398 564 aaPredicted RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 MSLNQ13421 630 aaPredicted RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 CUL3Q13618 768 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 RAB33AQ14088 237 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 ESCO1Q5FWF5 840 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 FAM209AQ5JX71 171 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 IL31Q6EBC2 164 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 BTN2A1Q7KYR7 527 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 MRPL10Q7Z7H8 261 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 GALNT5Q7Z7M9 940 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 MAGEB6Q8N7X4 407 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 LSMEM1Q8N8F7 131 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 KLRG1Q96E93 195 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 SEC16BQ96JE7 1060 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 BTBD6Q96KE9 485 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 ZMAT2Q96NC0 199 aaKnown RBP3.33□□□□□ -1.88
CBWD3-209ENST00000614377 SAMD11Q96NU1 681 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 ALG1Q9BT22 464 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 NLRC4Q9NPP4 1024 aa3.33□□□□□ -1.88
CBWD3-209ENST00000614377 TBC1D22BQ9NU19 505 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms