RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 WDR90Q96KV7 1748 aa11□□□□□ -0.65
GGA3-221ENST00000614198 TMEM150BA6NC51 233 aa11□□□□□ -0.65
GGA3-221ENST00000614198 STX10O60499 249 aa11□□□□□ -0.65
GGA3-221ENST00000614198 FCER1AP12319 257 aa11□□□□□ -0.65
GGA3-221ENST00000614198 SREBF1P36956 1147 aa11□□□□□ -0.65
GGA3-221ENST00000614198 MRPS9P82933 396 aaKnown RBP11□□□□□ -0.65
GGA3-221ENST00000614198 SATB1Q01826 763 aa11□□□□□ -0.65
GGA3-221ENST00000614198 SP4Q02446 784 aa11□□□□□ -0.65
GGA3-221ENST00000614198 PPP4R3AQ6IN85 833 aa11□□□□□ -0.65
GGA3-221ENST00000614198 BAG1Q99933 345 aaPredicted RBP11□□□□□ -0.65
GGA3-221ENST00000614198 IRX2Q9BZI1 471 aaPredicted RBP11□□□□□ -0.65
GGA3-221ENST00000614198 GBP3Q9H0R5 595 aa11□□□□□ -0.65
GGA3-221ENST00000614198 FAM204AQ9H8W3 233 aa11□□□□□ -0.65
GGA3-221ENST00000614198 BLOC1S4Q9NUP1 217 aa11□□□□□ -0.65
GGA3-221ENST00000614198 TBC1D7Q9P0N9 293 aa11□□□□□ -0.65
GGA3-221ENST00000614198 KIAA1024Q9UPX6 916 aa11□□□□□ -0.65
GGA3-221ENST00000614198 PITPNM2Q9BZ72 1349 aa11□□□□□ -0.65
GGA3-221ENST00000614198 HNRNPH1P31943 449 aaKnown RBP11□□□□□ -0.65
GGA3-221ENST00000614198 SARSP49591 514 aaKnown RBP11□□□□□ -0.65
GGA3-221ENST00000614198 COG2Q14746 738 aa11□□□□□ -0.65
GGA3-221ENST00000614198 REPS2Q8NFH8 660 aa11□□□□□ -0.65
GGA3-221ENST00000614198 SYTL5Q8TDW5 730 aaPredicted RBP11□□□□□ -0.65
GGA3-221ENST00000614198 AS3MTQ9HBK9 375 aa11□□□□□ -0.65
GGA3-221ENST00000614198 BMP2KQ9NSY1 1161 aaPredicted RBP11□□□□□ -0.65
GGA3-221ENST00000614198 RNF146Q9NTX7 359 aa11□□□□□ -0.65
GGA3-221ENST00000614198 FANCLQ9NW38 375 aa11□□□□□ -0.65
GGA3-221ENST00000614198 TMOD4Q9NZQ9 345 aa11□□□□□ -0.65
GGA3-221ENST00000614198 WRAP73Q9P2S5 460 aaPredicted RBP11□□□□□ -0.65
GGA3-221ENST00000614198 DOCK5Q9H7D0 1870 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 TRIM49BA6NDI0 452 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 GRIN3BO60391 1043 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 ATP9AO75110 1047 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 TUBBP07437 444 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 DSG3P32926 999 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 MNAT1P51948 309 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 TUBB2AQ13885 445 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 CTTNQ14247 550 aaKnown RBP10.99□□□□□ -0.65
GGA3-221ENST00000614198 PIGOQ8TEQ8 1089 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 TUBB2BQ9BVA1 445 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 FGFBP2Q9BYJ0 223 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 SUGCTQ9HAC7 445 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 KCNMB3Q9NPA1 279 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 SAMSN1Q9NSI8 373 aaKnown RBP10.99□□□□□ -0.65
GGA3-221ENST00000614198 BMP15O95972 392 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 IREB2P48200 963 aaKnown RBP10.99□□□□□ -0.65
GGA3-221ENST00000614198 SPIRE1Q08AE8 756 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 EEPD1Q7L9B9 569 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 GDAP1L1Q96MZ0 367 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 CDC23Q9UJX2 597 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 MRPL11Q9Y3B7 192 aaKnown RBP10.99□□□□□ -0.65
GGA3-221ENST00000614198 ASTN1O14525 1302 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 PGK2P07205 417 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 PMS1P54277 932 aaKnown RBP10.99□□□□□ -0.65
GGA3-221ENST00000614198 USP14P54578 494 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 TBX2Q13207 712 aaPredicted RBP10.99□□□□□ -0.65
GGA3-221ENST00000614198 TOGARAM2Q6ZUX3 1019 aa10.99□□□□□ -0.65
GGA3-221ENST00000614198 MYMKA6NI61 221 aa10.98□□□□□ -0.65
GGA3-221ENST00000614198 ZBED4O75132 1171 aa10.98□□□□□ -0.65
GGA3-221ENST00000614198 MORC3Q14149 939 aa10.98□□□□□ -0.65
GGA3-221ENST00000614198 RNF207Q6ZRF8 634 aa10.98□□□□□ -0.65
GGA3-221ENST00000614198 CATSPER3Q86XQ3 398 aa10.98□□□□□ -0.65
GGA3-221ENST00000614198 CEP120Q8N960 986 aa10.98□□□□□ -0.65
GGA3-221ENST00000614198 AFAP1L1Q8TED9 768 aa10.98□□□□□ -0.65
GGA3-221ENST00000614198 TACO1Q9BSH4 297 aaKnown RBP10.98□□□□□ -0.65
GGA3-221ENST00000614198 PPP2R3BQ9Y5P8 575 aa10.98□□□□□ -0.65
GGA3-221ENST00000614198 PIK3CDO00329 1044 aa10.98□□□□□ -0.65
GGA3-221ENST00000614198 CCT6AP40227 531 aaKnown RBP10.98□□□□□ -0.65
GGA3-221ENST00000614198 PRPHP41219 470 aa10.98□□□□□ -0.65
GGA3-221ENST00000614198 AARSP49588 968 aaKnown RBP eCLIP10.98□□□□□ -0.65
GGA3-221ENST00000614198 MOGSQ13724 837 aa10.98□□□□□ -0.65
GGA3-221ENST00000614198 LRRC41Q15345 812 aa10.98□□□□□ -0.65
GGA3-221ENST00000614198 TMEM63BQ5T3F8 832 aa10.98□□□□□ -0.65
GGA3-221ENST00000614198 WDR78Q5VTH9 848 aa10.98□□□□□ -0.65
GGA3-221ENST00000614198 ANKRD13AQ8IZ07 590 aa10.98□□□□□ -0.65
GGA3-221ENST00000614198 RMDN3Q96TC7 470 aa10.98□□□□□ -0.65
GGA3-221ENST00000614198 IKZF4Q9H2S9 585 aa10.98□□□□□ -0.65
GGA3-221ENST00000614198 VIPAS39Q9H9C1 493 aa10.98□□□□□ -0.65
GGA3-221ENST00000614198 TESPA1A2RU30 521 aaPredicted RBP10.97□□□□□ -0.65
GGA3-221ENST00000614198 SFI1A8K8P3 1242 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 CELF2O95319 508 aaKnown RBP10.97□□□□□ -0.65
GGA3-221ENST00000614198 USP11P51784 963 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 MYL5Q02045 173 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 GRM1Q13255 1194 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 CST9Q5W186 159 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 KCNV1Q6PIU1 500 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 ASCC2Q9H1I8 757 aaPredicted RBP10.97□□□□□ -0.65
GGA3-221ENST00000614198 A1CFQ9NQ94 594 aaKnown RBP10.97□□□□□ -0.65
GGA3-221ENST00000614198 SYNPO2Q9UMS6 1093 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 RPN1P04843 607 aaKnown RBP10.97□□□□□ -0.65
GGA3-221ENST00000614198 FXR2P51116 673 aaKnown RBP eCLIP10.97□□□□□ -0.65
GGA3-221ENST00000614198 HSD17B4P51659 736 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 STK4Q13043 487 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 PABPC4Q13310 644 aaKnown RBP eCLIP10.97□□□□□ -0.655e-10■■■■■ 57.7
GGA3-221ENST00000614198 AP3B2Q13367 1082 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 PPP2R5AQ15172 486 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 NOL9Q5SY16 702 aaKnown RBP10.97□□□□□ -0.65
GGA3-221ENST00000614198 SPATA20Q8TB22 786 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 SLC39A2Q9NP94 309 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 CCDC189A1A4V9 331 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 KLRC4O43908 158 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms