RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 EIF3JO75822 258 aaKnown RBP12.85□□□□□ -0.35
SLIRP-212ENST00000613856 PSMD10O75832 226 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 PGK2P07205 417 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 ICAM3P32942 547 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 TECP42680 631 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 FAAP100Q0VG06 881 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 MAPK8IP2Q13387 824 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-212ENST00000613856 MTMR1Q13613 665 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 STXBP2Q15833 593 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 ZNF792Q3KQV3 632 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 GNPTABQ3T906 1256 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 TPRNQ4KMQ1 711 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 SPECC1Q5M775 1068 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 C1orf53Q5VUE5 145 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 USP49Q70CQ1 688 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 EPSTI1Q96J88 318 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 MAML3Q96JK9 1138 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.85□□□□□ -0.356e-7■■■□□ 18.5
SLIRP-212ENST00000613856 ZNF577Q9BSK1 485 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 WDR11Q9BZH6 1224 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 CLSTN2Q9H4D0 955 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 PRDM12Q9H4Q4 367 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 AGO4Q9HCK5 861 aaKnown RBP12.85□□□□□ -0.35
SLIRP-212ENST00000613856 KCNH7Q9NS40 1196 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 USP25Q9UHP3 1055 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 PHF24Q9UPV7 400 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 STK24Q9Y6E0 443 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 A0A1W2PQ45 241 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-212ENST00000613856 A0A1W2PQY0 241 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 POTEMA6NI47 508 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 ASB14A6NK59 587 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 IPO5O00410 1097 aaKnown RBP12.84□□□□□ -0.35
SLIRP-212ENST00000613856 KIAA0355O15063 1070 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 ZNF202O95125 648 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 ARP10275 920 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 RAG1P15918 1043 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 UBA7P41226 1012 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 FPGSQ05932 587 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 PDE4DQ08499 809 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 PPP2R5CQ13362 524 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 CCDC85BQ15834 202 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-212ENST00000613856 LRCH2Q5VUJ6 765 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 B3GNT9Q6UX72 402 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 C16orf59Q7L2K0 433 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 ELOA2Q8IYF1 753 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-212ENST00000613856 ADAMTS19Q8TE59 1207 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 TIFAQ96CG3 184 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 PBX4Q9BYU1 374 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 NUP62CLQ9H1M0 184 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 XPNPEP3Q9NQH7 507 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 LRWD1Q9UFC0 647 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 KDM3AQ9Y4C1 1321 aa12.84□□□□□ -0.35
SLIRP-212ENST00000613856 MYADML2A6NDP7 307 aa12.83□□□□□ -0.36
SLIRP-212ENST00000613856 CTAGE5O15320 804 aa12.83□□□□□ -0.36
SLIRP-212ENST00000613856 GAS7O60861 476 aa12.83□□□□□ -0.36
SLIRP-212ENST00000613856 RGS20O76081 388 aa12.83□□□□□ -0.36
SLIRP-212ENST00000613856 PLA2G5P39877 138 aa12.83□□□□□ -0.36
SLIRP-212ENST00000613856 SEMA3FQ13275 785 aa12.83□□□□□ -0.36
SLIRP-212ENST00000613856 E2F4Q16254 413 aa12.83□□□□□ -0.36
SLIRP-212ENST00000613856 HYIQ5T013 277 aa12.83□□□□□ -0.36
SLIRP-212ENST00000613856 HAUS3Q68CZ6 603 aa12.83□□□□□ -0.36
SLIRP-212ENST00000613856 RBM43Q6ZSC3 357 aaKnown RBP12.83□□□□□ -0.36
SLIRP-212ENST00000613856 CABP7Q86V35 215 aa12.83□□□□□ -0.36
SLIRP-212ENST00000613856 MSL3Q8N5Y2 521 aaKnown RBP12.83□□□□□ -0.36
SLIRP-212ENST00000613856 GJA10Q969M2 543 aa12.83□□□□□ -0.36
SLIRP-212ENST00000613856 ASB2Q96Q27 587 aa12.83□□□□□ -0.36
SLIRP-212ENST00000613856 MMTAG2Q9BU76 263 aaKnown RBP12.83□□□□□ -0.36
SLIRP-212ENST00000613856 TEKT3Q9BXF9 490 aa12.83□□□□□ -0.36
SLIRP-212ENST00000613856 DISC1Q9NRI5 854 aa12.83□□□□□ -0.36
SLIRP-212ENST00000613856 TBC1D22BQ9NU19 505 aa12.83□□□□□ -0.36
SLIRP-212ENST00000613856 SLC5A4Q9NY91 659 aa12.83□□□□□ -0.36
SLIRP-212ENST00000613856 CCDC39Q9UFE4 941 aa12.83□□□□□ -0.36
SLIRP-212ENST00000613856 NFASCO94856 1347 aa12.83□□□□□ -0.36
SLIRP-212ENST00000613856 A0A087X0B3 334 aa12.82□□□□□ -0.36
SLIRP-212ENST00000613856 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.82□□□□□ -0.36
SLIRP-212ENST00000613856 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.82□□□□□ -0.36
SLIRP-212ENST00000613856 PP2D1A8MPX8 630 aa12.82□□□□□ -0.36
SLIRP-212ENST00000613856 SPATA31C2B4DYI2 1134 aa12.82□□□□□ -0.36
SLIRP-212ENST00000613856 POLR2DO15514 142 aaKnown RBP12.82□□□□□ -0.36
SLIRP-212ENST00000613856 DHX15O43143 795 aaKnown RBP12.82□□□□□ -0.36
SLIRP-212ENST00000613856 ACTN4O43707 911 aaKnown RBP12.82□□□□□ -0.36
SLIRP-212ENST00000613856 LETM1O95202 739 aaPredicted RBP12.82□□□□□ -0.36
SLIRP-212ENST00000613856 ITGB3BPQ13352 177 aaPredicted RBP12.82□□□□□ -0.36
SLIRP-212ENST00000613856 TMEM119Q4V9L6 283 aa12.82□□□□□ -0.36
SLIRP-212ENST00000613856 KRT79Q5XKE5 535 aa12.82□□□□□ -0.36
SLIRP-212ENST00000613856 MAMDC4Q6UXC1 1216 aa12.82□□□□□ -0.36
SLIRP-212ENST00000613856 KRBA2Q6ZNG9 492 aa12.82□□□□□ -0.36
SLIRP-212ENST00000613856 KCTD17Q8N5Z5 321 aa12.82□□□□□ -0.36
SLIRP-212ENST00000613856 IQUBQ8NA54 791 aa12.82□□□□□ -0.36
SLIRP-212ENST00000613856 ERMNQ8TAM6 284 aa12.82□□□□□ -0.36
SLIRP-212ENST00000613856 SNX29Q8TEQ0 813 aa12.82□□□□□ -0.36
SLIRP-212ENST00000613856 ZFP91Q96JP5 570 aaPredicted RBP12.82□□□□□ -0.36
SLIRP-212ENST00000613856 CUEDC2Q9H467 287 aa12.82□□□□□ -0.36
SLIRP-212ENST00000613856 MAGEF1Q9HAY2 307 aa12.82□□□□□ -0.36
SLIRP-212ENST00000613856 TMEM39AQ9NV64 488 aa12.82□□□□□ -0.36
SLIRP-212ENST00000613856 SYNGAP1Q96PV0 1343 aa12.82□□□□□ -0.36
SLIRP-212ENST00000613856 ADAMTS4O75173 837 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 SLFN14P0C7P3 912 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 ACRP10323 421 aa12.81□□□□□ -0.36
SLIRP-212ENST00000613856 KCNA2P16389 499 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms