RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 NAA25Q14CX7 972 aa22.49■■□□□ 1.19
SMAD6-205ENST00000612349 NSUN6Q8TEA1 469 aaKnown RBP22.49■■□□□ 1.19
SMAD6-205ENST00000612349 NCAPGQ9BPX3 1015 aa22.49■■□□□ 1.19
SMAD6-205ENST00000612349 MROH7-TTC4A0A0A0MT08 1334 aa22.49■■□□□ 1.19
SMAD6-205ENST00000612349 GPC4O75487 556 aa22.49■■□□□ 1.19
SMAD6-205ENST00000612349 MTMR1Q13613 665 aa22.49■■□□□ 1.19
SMAD6-205ENST00000612349 TRIM42Q8IWZ5 723 aa22.49■■□□□ 1.19
SMAD6-205ENST00000612349 LRRC8CQ8TDW0 803 aa22.49■■□□□ 1.19
SMAD6-205ENST00000612349 RNF139Q8WU17 664 aa22.49■■□□□ 1.19
SMAD6-205ENST00000612349 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.49■■□□□ 1.19
SMAD6-205ENST00000612349 PPP1R13BQ96KQ4 1090 aa22.49■■□□□ 1.19
SMAD6-205ENST00000612349 ABCB11O95342 1321 aa22.48■■□□□ 1.19
SMAD6-205ENST00000612349 COBLO75128 1261 aa22.48■■□□□ 1.19
SMAD6-205ENST00000612349 SATB1Q01826 763 aa22.48■■□□□ 1.19
SMAD6-205ENST00000612349 ASPHQ12797 758 aa22.48■■□□□ 1.19
SMAD6-205ENST00000612349 TRIM28Q13263 835 aaKnown RBP22.48■■□□□ 1.19
SMAD6-205ENST00000612349 UNC13DQ70J99 1090 aa22.48■■□□□ 1.19
SMAD6-205ENST00000612349 NLRP4Q96MN2 994 aa22.48■■□□□ 1.19
SMAD6-205ENST00000612349 PHLDB3Q6NSJ2 640 aa22.48■■□□□ 1.19
SMAD6-205ENST00000612349 PRPSAP2O60256 369 aa22.48■■□□□ 1.19
SMAD6-205ENST00000612349 CCDC38Q502W7 563 aa22.48■■□□□ 1.19
SMAD6-205ENST00000612349 RNF10Q8N5U6 811 aaKnown RBP22.48■■□□□ 1.19
SMAD6-205ENST00000612349 ZNF579Q8NAF0 562 aaKnown RBP22.48■■□□□ 1.19
SMAD6-205ENST00000612349 AIFM3Q96NN9 605 aa22.48■■□□□ 1.19
SMAD6-205ENST00000612349 ZHX2Q9Y6X8 837 aa22.48■■□□□ 1.19
SMAD6-205ENST00000612349 PNPLA6Q8IY17 1366 aa22.48■■□□□ 1.19
SMAD6-205ENST00000612349 ACTN1P12814 892 aa22.48■■□□□ 1.19
SMAD6-205ENST00000612349 SAT1P21673 171 aa22.48■■□□□ 1.19
SMAD6-205ENST00000612349 ELF1P32519 619 aa22.48■■□□□ 1.19
SMAD6-205ENST00000612349 RAB44Q7Z6P3 723 aaPredicted RBP22.48■■□□□ 1.19
SMAD6-205ENST00000612349 SKA2Q8WVK7 121 aaPredicted RBP22.48■■□□□ 1.19
SMAD6-205ENST00000612349 PPP1R12CQ9BZL4 782 aa22.48■■□□□ 1.19
SMAD6-205ENST00000612349 DCP1AQ9NPI6 582 aaPredicted RBP22.48■■□□□ 1.19
SMAD6-205ENST00000612349 TOPORSQ9NS56 1045 aaPredicted RBP22.48■■□□□ 1.19
SMAD6-205ENST00000612349 USP17L10C9JJH3 530 aa22.47■■□□□ 1.19
SMAD6-205ENST00000612349 FAM83BQ5T0W9 1011 aa22.47■■□□□ 1.19
SMAD6-205ENST00000612349 TAB3Q8N5C8 712 aaPredicted RBP22.47■■□□□ 1.19
SMAD6-205ENST00000612349 WRNIP1Q96S55 665 aa22.47■■□□□ 1.19
SMAD6-205ENST00000612349 ATP6V0A4Q9HBG4 840 aa22.47■■□□□ 1.19
SMAD6-205ENST00000612349 DONSONQ9NYP3 566 aa22.47■■□□□ 1.19
SMAD6-205ENST00000612349 KRT3P12035 628 aa22.47■■□□□ 1.19
SMAD6-205ENST00000612349 DSTYKQ6XUX3 929 aa22.47■■□□□ 1.19
SMAD6-205ENST00000612349 KCNQ2O43526 872 aa22.47■■□□□ 1.19
SMAD6-205ENST00000612349 KPNA2P52292 529 aaKnown RBP22.47■■□□□ 1.19
SMAD6-205ENST00000612349 CACNB3P54284 484 aa22.47■■□□□ 1.19
SMAD6-205ENST00000612349 PEX3P56589 373 aa22.47■■□□□ 1.19
SMAD6-205ENST00000612349 TNFAIP2Q03169 654 aa22.47■■□□□ 1.19
SMAD6-205ENST00000612349 SCINQ9Y6U3 715 aa22.47■■□□□ 1.19
SMAD6-205ENST00000612349 CPP00450 1065 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 PRELPP51888 382 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 OSTNP61366 133 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 IL9RQ01113 521 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 ARL13BQ3SXY8 428 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 ZNF667Q5HYK9 610 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 DNAAF3Q8N9W5 541 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 UHMK1Q8TAS1 419 aaKnown RBP22.46■■□□□ 1.19
SMAD6-205ENST00000612349 CAPS2Q9BXY5 557 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 SAMSN1Q9NSI8 373 aaKnown RBP22.46■■□□□ 1.19
SMAD6-205ENST00000612349 SUGT1Q9Y2Z0 365 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 BZW1Q7L1Q6 419 aaKnown RBP22.46■■□□□ 1.19
SMAD6-205ENST00000612349 VSTM4Q8IW00 320 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 HDAC11Q96DB2 347 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 VCX3AQ9NNX9 186 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 PTPN22Q9Y2R2 807 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 ARHGAP42A6NI28 874 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 EIF4A3P38919 411 aaKnown RBP22.46■■□□□ 1.19
SMAD6-205ENST00000612349 EPHB4P54760 987 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 ARHGEF18Q6ZSZ5 1173 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 CERKQ8TCT0 537 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 HEXIM2Q96MH2 286 aaKnown RBP22.46■■□□□ 1.19
SMAD6-205ENST00000612349 CALN1Q9BXU9 219 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 EFCC1Q9HA90 598 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 BAG5Q9UL15 447 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 CRB1P82279 1406 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 COPB2P35606 906 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 PPARDQ03181 441 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 SLFNL1Q499Z3 407 aa22.46■■□□□ 1.19
SMAD6-205ENST00000612349 HMGB1P1B2RPK0 211 aaPredicted RBP22.45■■□□□ 1.19
SMAD6-205ENST00000612349 PANX2Q96RD6 677 aa22.45■■□□□ 1.19
SMAD6-205ENST00000612349 POC1B-GALNT4F8VUJ3 575 aa22.45■■□□□ 1.18
SMAD6-205ENST00000612349 CYP2D6P10635 497 aa22.45■■□□□ 1.18
SMAD6-205ENST00000612349 CD58P19256 250 aa22.45■■□□□ 1.18
SMAD6-205ENST00000612349 SFNP31947 248 aa22.45■■□□□ 1.18
SMAD6-205ENST00000612349 SEPT6Q14141 434 aa22.45■■□□□ 1.18
SMAD6-205ENST00000612349 MAPK6Q16659 721 aa22.45■■□□□ 1.18
SMAD6-205ENST00000612349 RHOT2Q8IXI1 618 aa22.45■■□□□ 1.18
SMAD6-205ENST00000612349 SP8Q8IXZ3 490 aa22.45■■□□□ 1.18
SMAD6-205ENST00000612349 SPHKAPQ2M3C7 1700 aa22.45■■□□□ 1.18
SMAD6-205ENST00000612349 KCTD6Q8NC69 237 aa22.45■■□□□ 1.18
SMAD6-205ENST00000612349 FAM49AQ9H0Q0 323 aaPredicted RBP22.45■■□□□ 1.18
SMAD6-205ENST00000612349 HEXIM1O94992 359 aaKnown RBP22.45■■□□□ 1.18
SMAD6-205ENST00000612349 PROM2Q8N271 834 aa22.45■■□□□ 1.18
SMAD6-205ENST00000612349 RYBPQ8N488 228 aaPredicted RBP22.45■■□□□ 1.18
SMAD6-205ENST00000612349 ZNF526Q8TF50 670 aaPredicted RBP22.45■■□□□ 1.18
SMAD6-205ENST00000612349 GJD4Q96KN9 370 aaPredicted RBP22.45■■□□□ 1.18
SMAD6-205ENST00000612349 SLC8A2Q9UPR5 921 aa22.45■■□□□ 1.18
SMAD6-205ENST00000612349 NBPF26B4DH59 902 aa22.44■■□□□ 1.18
SMAD6-205ENST00000612349 NBPF10Q6P3W6 841 aaKnown RBP22.44■■□□□ 1.18
SMAD6-205ENST00000612349 TBC1D10CQ8IV04 446 aa22.44■■□□□ 1.18
SMAD6-205ENST00000612349 NBPF15Q8N660 670 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms