RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 ZNF263O14978 683 aa11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 MOCS3O95396 460 aa11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 STIP1P31948 543 aaKnown RBP11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 TRAPPC11Q7Z392 1133 aa11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 LRRC47Q8N1G4 583 aaKnown RBP11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 KCNN1Q92952 543 aa11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 PYM1Q9BRP8 204 aaKnown RBP11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 KIF9Q9HAQ2 790 aa11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 NLRC4Q9NPP4 1024 aa11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 BARHL2Q9NY43 387 aa11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 BUB1O43683 1085 aa11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 RNF40O75150 1001 aa11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 BAG3O95817 575 aa11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 OR52Z1P0C646 297 aa11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 GPSM2P81274 684 aa11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 PREPLQ4J6C6 727 aaPredicted RBP11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 CNBD1Q8NA66 436 aa11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 KIAA0895Q8NCT3 520 aa11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 GIMAP8Q8ND71 665 aaPredicted RBP11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 EZH1Q92800 747 aaPredicted RBP11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 P2RX5Q93086 422 aa11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 CAPN11Q9UMQ6 739 aa11.76□□□□□ -0.53
PCDHGC3-202ENST00000611950 KRT86O43790 486 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 TDP2O95551 362 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 GNAQP50148 359 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 TRIM14Q14142 442 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 TMEM110Q86TL2 294 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 DNAAF5Q86Y56 855 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 DAGLBQ8NCG7 672 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 COG1Q8WTW3 980 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 CCDC42Q96M95 316 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 DNAJC7Q99615 494 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 NUDT12Q9BQG2 462 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 HAUS4Q9H6D7 363 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 KBTBD4Q9NVX7 518 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 RABL2AQ9UBK7 228 aaPredicted RBP11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 USP17L5A8MUK1 530 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 RHOBTB3O94955 611 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 CYP11B2P19099 503 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 FECHP22830 423 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 HNRNPH1P31943 449 aaKnown RBP11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 ACTN2P35609 894 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 BTDP43251 543 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 DNM2P50570 870 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 GSTO1P78417 241 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 NFRKBQ6P4R8 1299 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 ZNF804AQ7Z570 1209 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 ZBTB10Q96DT7 871 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 EYA3Q99504 573 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 SEMA6BQ9H3T3 888 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 GPCPD1Q9NPB8 672 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 PSD3Q9NYI0 1048 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 FLT1P17948 1338 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 CDK5RAP2Q96SN8 1893 aa11.75□□□□□ -0.53
PCDHGC3-202ENST00000611950 EEF1GP26641 437 aaKnown RBP11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 CYLC1P35663 651 aaPredicted RBP11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 UBE2SQ16763 222 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 RRAGAQ7L523 313 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 TADA2BQ86TJ2 420 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 RRP36Q96EU6 259 aaKnown RBP11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 CEP95Q96GE4 821 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 DDX60LQ5H9U9 1706 aaKnown RBP11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 SLC37A4O43826 429 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 SH3BP5O60239 455 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 SRGNP10124 158 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 GCKP35557 465 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 TNNI2P48788 182 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 CDK8P49336 464 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 USP14P54578 494 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 KIF5AQ12840 1032 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 NONOQ15233 471 aaKnown RBP eCLIP11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 TDRD12Q587J7 1177 aaKnown RBP11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 MIIPQ5JXC2 388 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 SOGA3Q5TF21 947 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 PRR5LQ6MZQ0 368 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 AMOTL1Q8IY63 956 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 ANKRD31Q8N7Z5 1873 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 EXOC4Q96A65 974 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 CDK5RAP3Q96JB5 506 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 PHACTR1Q9C0D0 580 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 EHD4Q9H223 541 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 ZHX3Q9H4I2 956 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 CD209Q9NNX6 404 aa11.74□□□□□ -0.53
PCDHGC3-202ENST00000611950 POTECB2RU33 542 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 POTEB2H3BUK9 544 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 AKR1B10O60218 316 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 UFL1O94874 794 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 RTN3O95197 1032 aaPredicted RBP11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 CCNE1P24864 410 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 GGCXP38435 758 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 EIF4A3P38919 411 aaKnown RBP11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 MRPL12P52815 198 aaKnown RBP11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 SESN3P58005 492 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 KCNK18Q7Z418 384 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 NELFCDQ8IXH7 590 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 HNRNPLLQ8WVV9 542 aaKnown RBP11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 RSPH1Q8WYR4 309 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 JPH2Q9BR39 696 aaPredicted RBP11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 IFIH1Q9BYX4 1025 aaKnown RBP11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 THAP9Q9H5L6 903 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms