RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 TCEAL9Q9UHQ7 104 aa9.95□□□□□ -0.82
SMAD4-217ENST00000611848 DCDC2CA8MYV0 355 aa9.94□□□□□ -0.82
SMAD4-217ENST00000611848 MSH4O15457 936 aa9.94□□□□□ -0.82
SMAD4-217ENST00000611848 DHX15O43143 795 aaKnown RBP9.94□□□□□ -0.82
SMAD4-217ENST00000611848 CCNT1O60563 726 aaKnown RBP9.94□□□□□ -0.82
SMAD4-217ENST00000611848 TDP2O95551 362 aa9.94□□□□□ -0.82
SMAD4-217ENST00000611848 F2P00734 622 aa9.94□□□□□ -0.82
SMAD4-217ENST00000611848 CCDC192P0DO97 292 aa9.94□□□□□ -0.82
SMAD4-217ENST00000611848 U2AF2P26368 475 aaKnown RBP eCLIP9.94□□□□□ -0.829e-9■■■■□ 20.5
SMAD4-217ENST00000611848 SP4Q02446 784 aa9.94□□□□□ -0.82
SMAD4-217ENST00000611848 PTPN11Q06124 597 aaPredicted RBP9.94□□□□□ -0.82
SMAD4-217ENST00000611848 TRIM60Q495X7 471 aa9.94□□□□□ -0.82
SMAD4-217ENST00000611848 NFRKBQ6P4R8 1299 aa9.94□□□□□ -0.82
SMAD4-217ENST00000611848 BRAPQ7Z569 592 aa9.94□□□□□ -0.82
SMAD4-217ENST00000611848 ZSCAN30Q86W11 494 aa9.94□□□□□ -0.82
SMAD4-217ENST00000611848 KAT2BQ92831 832 aa9.94□□□□□ -0.82
SMAD4-217ENST00000611848 ATP11BQ9Y2G3 1177 aa9.94□□□□□ -0.82
SMAD4-217ENST00000611848 WDR81Q562E7 1941 aa9.94□□□□□ -0.82
SMAD4-217ENST00000611848 GRIN2DO15399 1336 aa9.94□□□□□ -0.82
SMAD4-217ENST00000611848 GSTTP1A0A1W2PQM5 241 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 H3BRB1 525 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 HAS3O00219 553 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 TLR3O15455 904 aaKnown RBP9.93□□□□□ -0.82
SMAD4-217ENST00000611848 PQBP1O60828 265 aaKnown RBP9.93□□□□□ -0.82
SMAD4-217ENST00000611848 NR1I2O75469 434 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 LGALS2P05162 132 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 TCF7P36402 384 aaPredicted RBP9.93□□□□□ -0.82
SMAD4-217ENST00000611848 TRAPPC10P48553 1259 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 PSEN2P49810 448 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 PSMC6P62333 389 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 KRT76Q01546 638 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 TLE2Q04725 743 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 NBPF20Q3BBV1 942 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 ZNF746Q6NUN9 644 aaPredicted RBP9.93□□□□□ -0.82
SMAD4-217ENST00000611848 NOSTRINQ8IVI9 506 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 C7orf61Q8IZ16 206 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 SLC5A5Q92911 643 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 RIT2Q99578 217 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 C16orf70Q9BSU1 422 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 TNMDQ9H2S6 317 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 TUT1Q9H6E5 874 aaKnown RBP9.93□□□□□ -0.82
SMAD4-217ENST00000611848 ZNF215Q9UL58 517 aaPredicted RBP9.93□□□□□ -0.82
SMAD4-217ENST00000611848 NOL7Q9UMY1 257 aaKnown RBP9.93□□□□□ -0.82
SMAD4-217ENST00000611848 TRIP12Q14669 1992 aaPredicted RBP9.93□□□□□ -0.82
SMAD4-217ENST00000611848 EMSYQ7Z589 1322 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 DNAH12Q6ZR08 3092 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 FAM205CA6NFA0 338 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 DDX39AO00148 427 aaKnown RBP9.93□□□□□ -0.82
SMAD4-217ENST00000611848 TBX3O15119 743 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 LGR5O75473 907 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 ATG7O95352 703 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 YEATS4O95619 227 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 ZNF286BP0CG31 522 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 ACTR2P61160 394 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 TYRO3Q06418 890 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 MFSD10Q14728 455 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 KIAA0753Q2KHM9 967 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 UTP14CQ5TAP6 766 aaKnown RBP9.93□□□□□ -0.82
SMAD4-217ENST00000611848 LRCH2Q5VUJ6 765 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 SESTD1Q86VW0 696 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 FAM126BQ8IXS8 530 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 SMAP1Q8IYB5 467 aaPredicted RBP9.93□□□□□ -0.82
SMAD4-217ENST00000611848 ENGASEQ8NFI3 743 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 ETNPPLQ8TBG4 499 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 FAM20AQ96MK3 541 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 TEKT3Q9BXF9 490 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 FTOQ9C0B1 505 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMAD4-217ENST00000611848 SMARCAD1Q9H4L7 1026 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 KCNMB3Q9NPA1 279 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 CCDC39Q9UFE4 941 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 PRKAG2Q9UGJ0 569 aa9.93□□□□□ -0.82
SMAD4-217ENST00000611848 TNRC18O15417 2968 aaPredicted RBP9.92□□□□□ -0.82
SMAD4-217ENST00000611848 A0A1W2PQ27 194 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 A0A1W2PQ64 194 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 A0A1W2PQD8 194 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 KIF28PB7ZC32 967 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 SLC37A4O43826 429 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 MARCH6O60337 910 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 GAS7O60861 476 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 PSMD10O75832 226 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 CCNE2O96020 404 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 CD4P01730 458 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 CLTBP09497 229 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 SUPT20HL2P0C7V6 817 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 CEBPZQ03701 1054 aaKnown RBP9.92□□□□□ -0.82
SMAD4-217ENST00000611848 ORC2Q13416 577 aaPredicted RBP9.92□□□□□ -0.82
SMAD4-217ENST00000611848 SNW1Q13573 536 aaKnown RBP9.92□□□□□ -0.82
SMAD4-217ENST00000611848 CAMK4Q16566 473 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 FAM47CQ5HY64 1035 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 MIS18BP1Q6P0N0 1132 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 ABHD15Q6UXT9 468 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 PLPPR4Q7Z2D5 763 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 LINC00301Q8NCQ3 95 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 GLG1Q92896 1179 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 AZI2Q9H6S1 392 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 ERAP1Q9NZ08 941 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 TELO2Q9Y4R8 837 aa9.92□□□□□ -0.82
SMAD4-217ENST00000611848 IGKV6D-21A0A0A0MT36 114 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 WDR64B1ANS9 1081 aa9.91□□□□□ -0.82
SMAD4-217ENST00000611848 PSAPP07602 524 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms