RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 CPVLQ9H3G5 476 aa16.91■□□□□ 0.3
TNXB-208ENST00000611016 FBXO40Q9UH90 709 aa16.91■□□□□ 0.3
TNXB-208ENST00000611016 MAGED2Q9UNF1 606 aaPredicted RBP16.91■□□□□ 0.3
TNXB-208ENST00000611016 CPDO75976 1380 aa16.9■□□□□ 0.3
TNXB-208ENST00000611016 ACTN1P12814 892 aa16.9■□□□□ 0.3
TNXB-208ENST00000611016 KPNA2P52292 529 aaKnown RBP16.9■□□□□ 0.3
TNXB-208ENST00000611016 JAK3P52333 1124 aa16.9■□□□□ 0.3
TNXB-208ENST00000611016 DYNLT1P63172 113 aa16.9■□□□□ 0.3
TNXB-208ENST00000611016 SNX1Q13596 522 aa16.9■□□□□ 0.3
TNXB-208ENST00000611016 TMTC3Q6ZXV5 915 aa16.9■□□□□ 0.3
TNXB-208ENST00000611016 ARL4AP40617 200 aa16.9■□□□□ 0.3
TNXB-208ENST00000611016 C11orf57Q6ZUT1 292 aaPredicted RBP16.9■□□□□ 0.3
TNXB-208ENST00000611016 TCP11Q8WWU5 503 aa16.9■□□□□ 0.3
TNXB-208ENST00000611016 CDC23Q9UJX2 597 aa16.9■□□□□ 0.3
TNXB-208ENST00000611016 ENC1O14682 589 aa16.9■□□□□ 0.3
TNXB-208ENST00000611016 KRT1P04264 644 aa16.9■□□□□ 0.3
TNXB-208ENST00000611016 APOBEC3FQ8IUX4 373 aaKnown RBP16.9■□□□□ 0.3
TNXB-208ENST00000611016 TBC1D10CQ8IV04 446 aa16.9■□□□□ 0.3
TNXB-208ENST00000611016 USP17L10C9JJH3 530 aa16.9■□□□□ 0.3
TNXB-208ENST00000611016 SLC44A5Q8NCS7 719 aa16.9■□□□□ 0.3
TNXB-208ENST00000611016 RCOR1Q9UKL0 485 aa16.9■□□□□ 0.3
TNXB-208ENST00000611016 PTCH1Q13635 1447 aa16.9■□□□□ 0.3
TNXB-208ENST00000611016 SMYD2Q9NRG4 433 aa16.9■□□□□ 0.3
TNXB-208ENST00000611016 MROH7-TTC4A0A0A0MT08 1334 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 CDHR2Q9BYE9 1310 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 NMT2O60551 498 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 CD2BP2O95400 341 aaKnown RBP16.89■□□□□ 0.29
TNXB-208ENST00000611016 S100BP04271 92 aaPredicted RBP16.89■□□□□ 0.29
TNXB-208ENST00000611016 GUCY2DQ02846 1103 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 PPP4R3CPQ6ZMV5 832 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 THNSL1Q8IYQ7 743 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 BANK1Q8NDB2 785 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 THAP9Q9H5L6 903 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 PLA2R1Q13018 1463 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 UTYO14607 1347 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 ARMCX2Q7L311 632 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 RNF139Q8WU17 664 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 HIP1RO75146 1068 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 CCNE1P24864 410 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 LLGL1Q15334 1064 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 SLFN12LQ6IEE8 588 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 KCTD6Q8NC69 237 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 PBKQ96KB5 322 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 BCL2L12Q9HB09 334 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 MRPL47Q9HD33 250 aaKnown RBP16.89■□□□□ 0.29
TNXB-208ENST00000611016 A2ML1A8K2U0 1454 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 TET3O43151 1660 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 IL9RQ01113 521 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 SPP2Q13103 211 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 RAPH1Q70E73 1250 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 CCDC170Q8IYT3 715 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 ZNF521Q96K83 1311 aa16.89■□□□□ 0.29
TNXB-208ENST00000611016 POC1B-GALNT4F8VUJ3 575 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 KRT10P13645 584 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 PDE1BQ01064 536 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 NOP9Q86U38 636 aaKnown RBP16.88■□□□□ 0.29
TNXB-208ENST00000611016 PPP1R12CQ9BZL4 782 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 HSPA8P11142 646 aaKnown RBP16.88■□□□□ 0.29
TNXB-208ENST00000611016 RCSD1Q6JBY9 416 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 DCLK2Q8N568 766 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 HDAC11Q96DB2 347 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 OTUD5Q96G74 571 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 CALN1Q9BXU9 219 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 SAMSN1Q9NSI8 373 aaKnown RBP16.88■□□□□ 0.29
TNXB-208ENST00000611016 ABCB11O95342 1321 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 WDR46O15213 610 aaKnown RBP16.88■□□□□ 0.29
TNXB-208ENST00000611016 LUC7L3O95232 432 aaKnown RBP16.88■□□□□ 0.29
TNXB-208ENST00000611016 GNAT1P11488 350 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 EPHB4P54760 987 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 USP17L15C9J2P7 530 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 USP17L13C9JLJ4 530 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 USP17L11C9JVI0 530 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 USP17L18D6R9N7 530 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 USP17L22D6RA61 530 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 USP17L17D6RBQ6 530 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 USP17L19D6RCP7 530 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 USP17L20D6RJB6 530 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 USP17L24Q0WX57 530 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 DBN1Q16643 649 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 ARL6IP4Q66PJ3 421 aaKnown RBP16.88■□□□□ 0.29
TNXB-208ENST00000611016 USP17L6PQ6QN14 398 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 GIMAP8Q8ND71 665 aaPredicted RBP16.88■□□□□ 0.29
TNXB-208ENST00000611016 OR6B3Q8NGW1 331 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 LRRC8CQ8TDW0 803 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 CEP95Q96GE4 821 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 GCNAQ96QF7 691 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 FAM8A1Q9UBU6 413 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 CPSF1Q10570 1443 aaKnown RBP16.88■□□□□ 0.29
TNXB-208ENST00000611016 RAB44Q7Z6P3 723 aaPredicted RBP16.88■□□□□ 0.29
TNXB-208ENST00000611016 SLC35F6Q8N357 371 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 TUBB6Q9BUF5 446 aa16.88■□□□□ 0.29
TNXB-208ENST00000611016 MCF2LO15068 1137 aa16.87■□□□□ 0.29
TNXB-208ENST00000611016 DNAAF3Q8N9W5 541 aa16.87■□□□□ 0.29
TNXB-208ENST00000611016 PARD3BQ8TEW8 1205 aa16.87■□□□□ 0.29
TNXB-208ENST00000611016 ATP6V0A4Q9HBG4 840 aa16.87■□□□□ 0.29
TNXB-208ENST00000611016 DCP1AQ9NPI6 582 aaPredicted RBP16.87■□□□□ 0.29
TNXB-208ENST00000611016 ADCY10Q96PN6 1610 aa16.87■□□□□ 0.29
TNXB-208ENST00000611016 RESTQ13127 1097 aa16.87■□□□□ 0.29
TNXB-208ENST00000611016 RBBP5Q15291 538 aaKnown RBP16.87■□□□□ 0.29
TNXB-208ENST00000611016 SGO2Q562F6 1265 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms