RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 WDR46O15213 610 aaKnown RBP7.93□□□□□ -1.14
CSDE1-218ENST00000610726 ACTN4O43707 911 aaKnown RBP7.93□□□□□ -1.14
CSDE1-218ENST00000610726 ATP2C2O75185 946 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 IFNB1P01574 187 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 CXCR5P32302 372 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 VPS41P49754 854 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 JAK3P52333 1124 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 MFAP3P55082 362 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 FMR1Q06787 632 aaKnown RBP eCLIP7.93□□□□□ -1.147e-7■■■■□ 24.8
CSDE1-218ENST00000610726 MESDQ14696 234 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 IFT20Q8IY31 132 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 NLRP7Q8WX94 980 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 AGXT2Q9BYV1 514 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 NHEJ1Q9H9Q4 299 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-218ENST00000610726 DDX41Q9UJV9 622 aaKnown RBP7.93□□□□□ -1.14
CSDE1-218ENST00000610726 PCDHB4Q9Y5E5 795 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 SPDYE2BA6NHP3 402 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 LGALS16A8MUM7 142 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 NR3C1P04150 777 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 SPDYE6P0CI01 402 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 FERP16591 822 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 NSFP46459 744 aaKnown RBP7.93□□□□□ -1.14
CSDE1-218ENST00000610726 ORC2Q13416 577 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-218ENST00000610726 PDIA5Q14554 519 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 SLC17A8Q8NDX2 589 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 IPO4Q8TEX9 1081 aaKnown RBP7.93□□□□□ -1.14
CSDE1-218ENST00000610726 LPAR1Q92633 364 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 KIF1AQ12756 1690 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 KRIT1O00522 736 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 DAPK3O43293 454 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 TCP1P17987 556 aaKnown RBP7.93□□□□□ -1.14
CSDE1-218ENST00000610726 STK4Q13043 487 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 IQCB1Q15051 598 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 SCYL2Q6P3W7 929 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 PHLDB2Q86SQ0 1253 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 HACE1Q8IYU2 909 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 TEX13BQ9BXU2 312 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 IQCGQ9H095 443 aaKnown RBP7.93□□□□□ -1.14
CSDE1-218ENST00000610726 DDX4Q9NQI0 724 aaKnown RBP7.93□□□□□ -1.14
CSDE1-218ENST00000610726 COMMD10Q9Y6G5 202 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 PDS5AQ29RF7 1337 aaKnown RBP7.93□□□□□ -1.14
CSDE1-218ENST00000610726 PIK3C2AO00443 1686 aa7.93□□□□□ -1.14
CSDE1-218ENST00000610726 CD58P19256 250 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 HOXA10P31260 410 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-218ENST00000610726 HPDP32754 393 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-218ENST00000610726 GCLMP48507 274 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 YWHAEP62258 255 aaKnown RBP7.92□□□□□ -1.14
CSDE1-218ENST00000610726 KCNH2Q12809 1159 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 WHAMMP3Q1A5X7 153 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 CYFIP1Q7L576 1253 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 GUF1Q8N442 669 aaKnown RBP7.92□□□□□ -1.14
CSDE1-218ENST00000610726 ATG4CQ96DT6 458 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 PDLIM2Q96JY6 352 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 MAP3K14Q99558 947 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 MTFR1LQ9H019 292 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 IL17RBQ9NRM6 502 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 BZW2Q9Y6E2 419 aaKnown RBP7.92□□□□□ -1.14
CSDE1-218ENST00000610726 NFAT5O94916 1531 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 DENND3A2RUS2 1198 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 KIF11P52732 1056 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 PTPAQ15257 358 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 KNOP1Q1ED39 458 aaKnown RBP7.92□□□□□ -1.14
CSDE1-218ENST00000610726 ANKRD40Q6AI12 368 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 PPP4R3CPQ6ZMV5 832 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 MCPH1Q8NEM0 835 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 ENGASEQ8NFI3 743 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 PPP1R14CQ8TAE6 165 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 MSTO1Q9BUK6 570 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 KCNK9Q9NPC2 374 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 PARP2Q9UGN5 583 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 CDC23Q9UJX2 597 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.92□□□□□ -1.14
CSDE1-218ENST00000610726 ZNF233A6NK53 670 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 FTCDO95954 541 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 SLURP2P0DP57 97 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 NMT1P30419 496 aaKnown RBP7.92□□□□□ -1.14
CSDE1-218ENST00000610726 TOB1P50616 345 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-218ENST00000610726 OTUD6BQ8N6M0 293 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 PANX2Q96RD6 677 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 BPIFA3Q9BQP9 254 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 PODXL2Q9NZ53 605 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 HESX1Q9UBX0 185 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 TTC26A0AVF1 554 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 IQCA1LA6NCM1 817 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 MYMKA6NI61 221 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 MYO1FO00160 1098 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 NR3C2P08235 984 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 FDX1P10109 184 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 ATF7P17544 494 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-218ENST00000610726 INPP5BP32019 993 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 GUCY2FP51841 1108 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 PSMC5P62195 406 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 NFX1Q12986 1120 aaKnown RBP7.92□□□□□ -1.14
CSDE1-218ENST00000610726 EPHA7Q15375 998 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 UAP1Q16222 522 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-218ENST00000610726 ZFPM1Q8IX07 1006 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 XXYLT1Q8NBI6 393 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 CCDC94Q9BW85 323 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-218ENST00000610726 PCDHA10Q9Y5I2 948 aa7.92□□□□□ -1.14
CSDE1-218ENST00000610726 MOCS3O95396 460 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms