RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 LTBP3Q9NS15 1303 aa10.84□□□□□ -0.67
CTCFL-222ENST00000609232 CTNND1O60716 968 aaKnown RBP10.83□□□□□ -0.67
CTCFL-222ENST00000609232 FOSP01100 380 aaPredicted RBP10.83□□□□□ -0.67
CTCFL-222ENST00000609232 ACTN1P12814 892 aa10.83□□□□□ -0.67
CTCFL-222ENST00000609232 NUMBP49757 651 aa10.83□□□□□ -0.67
CTCFL-222ENST00000609232 ANKRD40Q6AI12 368 aa10.83□□□□□ -0.67
CTCFL-222ENST00000609232 GOLGA6L1Q8N7Z2 621 aa10.83□□□□□ -0.67
CTCFL-222ENST00000609232 TEPSINQ96N21 525 aa10.83□□□□□ -0.67
CTCFL-222ENST00000609232 GPRC5CQ9NQ84 441 aa10.83□□□□□ -0.67
CTCFL-222ENST00000609232 MYMKA6NI61 221 aa10.83□□□□□ -0.68
CTCFL-222ENST00000609232 MEIS2O14770 477 aa10.83□□□□□ -0.68
CTCFL-222ENST00000609232 DLATP10515 647 aaKnown RBP10.83□□□□□ -0.68
CTCFL-222ENST00000609232 GCFC2P16383 781 aaKnown RBP10.83□□□□□ -0.68
CTCFL-222ENST00000609232 NMT1P30419 496 aaKnown RBP10.83□□□□□ -0.68
CTCFL-222ENST00000609232 PPP2R3AQ06190 1150 aa10.83□□□□□ -0.68
CTCFL-222ENST00000609232 AP3B2Q13367 1082 aa10.83□□□□□ -0.68
CTCFL-222ENST00000609232 CCDC122Q5T0U0 273 aa10.83□□□□□ -0.68
CTCFL-222ENST00000609232 C9orf131Q5VYM1 1079 aa10.83□□□□□ -0.68
CTCFL-222ENST00000609232 NAP1L4Q99733 375 aaKnown RBP10.83□□□□□ -0.68
CTCFL-222ENST00000609232 TRIM31Q9BZY9 425 aa10.83□□□□□ -0.68
CTCFL-222ENST00000609232 CCSER1Q9C0I3 900 aa10.83□□□□□ -0.68
CTCFL-222ENST00000609232 POLR2FP61218 127 aaKnown RBP10.83□□□□□ -0.68
CTCFL-222ENST00000609232 SUPT20HL1Q3ZLR7 823 aa10.83□□□□□ -0.68
CTCFL-222ENST00000609232 DPY19L2Q6NUT2 758 aa10.83□□□□□ -0.68
CTCFL-222ENST00000609232 PDXDC2PQ6P474 469 aa10.83□□□□□ -0.68
CTCFL-222ENST00000609232 GJB7Q6PEY0 223 aa10.83□□□□□ -0.68
CTCFL-222ENST00000609232 PRPF38AQ8NAV1 312 aaKnown RBP10.83□□□□□ -0.68
CTCFL-222ENST00000609232 LARP4BQ92615 738 aaKnown RBP10.83□□□□□ -0.68
CTCFL-222ENST00000609232 TUBGCP2Q9BSJ2 902 aa10.83□□□□□ -0.68
CTCFL-222ENST00000609232 PANK4Q9NVE7 773 aa10.83□□□□□ -0.68
CTCFL-222ENST00000609232 EHD2Q9NZN4 543 aa10.83□□□□□ -0.68
CTCFL-222ENST00000609232 IKBKBO14920 756 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 FAM13AO94988 1023 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 E2F4Q16254 413 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 ECM1Q16610 540 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 PLA2G4FQ68DD2 849 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 CNOT6LQ96LI5 555 aaKnown RBP10.82□□□□□ -0.68
CTCFL-222ENST00000609232 RPAP3Q9H6T3 665 aaPredicted RBP10.82□□□□□ -0.68
CTCFL-222ENST00000609232 AS3MTQ9HBK9 375 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 LMAN1P49257 510 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 NCAPHQ15003 741 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 LRCH2Q5VUJ6 765 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 WNK4Q96J92 1243 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 PPP1R13BQ96KQ4 1090 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 BPIFA3Q9BQP9 254 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 EHMT1Q9H9B1 1298 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 PHF20L1A8MW92 1017 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 ZBED4O75132 1171 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 TRIM49P0CI25 452 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 TRIM49CP0CI26 452 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 SLC20A2Q08357 652 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 FAM102BQ5T8I3 360 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 E4F1Q66K89 784 aaPredicted RBP10.82□□□□□ -0.68
CTCFL-222ENST00000609232 PPP4R3AQ6IN85 833 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 BTNL9Q6UXG8 535 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 GSPT2Q8IYD1 628 aaKnown RBP10.82□□□□□ -0.68
CTCFL-222ENST00000609232 CCDC42Q96M95 316 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 ZNF446Q9NWS9 450 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 TMOD4Q9NZQ9 345 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 FOCADQ5VW36 1801 aa10.82□□□□□ -0.68
CTCFL-222ENST00000609232 SARSP49591 514 aaKnown RBP10.81□□□□□ -0.68
CTCFL-222ENST00000609232 CASP4P49662 377 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 MMP14P50281 582 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 USP11P51784 963 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 GSDMDP57764 484 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 CT47A1Q5JQC4 288 aaPredicted RBP10.81□□□□□ -0.68
CTCFL-222ENST00000609232 ANKRD35Q8N283 1001 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 MRFAP1L1Q96HT8 127 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 WDR46O15213 610 aaKnown RBP10.81□□□□□ -0.68
CTCFL-222ENST00000609232 USP14P54578 494 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 ZSCAN26Q16670 478 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 SARM1Q6SZW1 724 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 SH3RF1Q7Z6J0 888 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 ELOA2Q8IYF1 753 aaPredicted RBP10.81□□□□□ -0.68
CTCFL-222ENST00000609232 SCYL3Q8IZE3 742 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 ZNF280CQ8ND82 737 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 DYDC2Q96IM9 177 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 MTMR9Q96QG7 549 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 ZCCHC17Q9NP64 241 aaKnown RBP10.81□□□□□ -0.68
CTCFL-222ENST00000609232 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.81□□□□□ -0.68
CTCFL-222ENST00000609232 PPP2R2CQ9Y2T4 447 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 TTC26A0AVF1 554 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 TULP2O00295 520 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 PPP1R12BO60237 982 aaPredicted RBP10.81□□□□□ -0.68
CTCFL-222ENST00000609232 KIF5CO60282 957 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 VCAM1P19320 739 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 CLK2P49760 499 aaKnown RBP10.81□□□□□ -0.68
CTCFL-222ENST00000609232 COPB1P53618 953 aaKnown RBP10.81□□□□□ -0.68
CTCFL-222ENST00000609232 HIRAP54198 1017 aaPredicted RBP10.81□□□□□ -0.68
CTCFL-222ENST00000609232 ORC2Q13416 577 aaPredicted RBP10.81□□□□□ -0.68
CTCFL-222ENST00000609232 NAALADL2Q58DX5 795 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 NYAP1Q6ZVC0 841 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 LPAR1Q92633 364 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 CCDC102AQ96A19 550 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 MED15Q96RN5 788 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 ZNF577Q9BSK1 485 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 WDR11Q9BZH6 1224 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 DNM3Q9UQ16 869 aa10.81□□□□□ -0.68
CTCFL-222ENST00000609232 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.81□□□□□ -0.681e-7■■□□□ 12
CTCFL-222ENST00000609232 MAFGO15525 162 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms