RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 ATF7P17544 494 aaPredicted RBP17.28■□□□□ 0.36
SSBP4-214ENST00000607020 SIGLEC14Q08ET2 396 aa17.28■□□□□ 0.36
SSBP4-214ENST00000607020 PPFIA1Q13136 1202 aa17.28■□□□□ 0.36
SSBP4-214ENST00000607020 ADGRD2Q7Z7M1 963 aa17.28■□□□□ 0.36
SSBP4-214ENST00000607020 KLHL23Q8NBE8 558 aa17.28■□□□□ 0.36
SSBP4-214ENST00000607020 DNAJB3Q8WWF6 145 aa17.28■□□□□ 0.36
SSBP4-214ENST00000607020 LINC01599Q8WXQ3 324 aa17.28■□□□□ 0.36
SSBP4-214ENST00000607020 SEPT1Q8WYJ6 367 aa17.28■□□□□ 0.36
SSBP4-214ENST00000607020 AGO3Q9H9G7 860 aaKnown RBP17.28■□□□□ 0.36
SSBP4-214ENST00000607020 TUBE1Q9UJT0 475 aa17.28■□□□□ 0.36
SSBP4-214ENST00000607020 USP15Q9Y4E8 981 aaPredicted RBP17.28■□□□□ 0.36
SSBP4-214ENST00000607020 ZDBF2Q9HCK1 2354 aa17.27■□□□□ 0.36
SSBP4-214ENST00000607020 PIK3CDO00329 1044 aa17.27■□□□□ 0.36
SSBP4-214ENST00000607020 GLP2RO95838 553 aa17.27■□□□□ 0.36
SSBP4-214ENST00000607020 STAG3L1P0CL83 205 aa17.27■□□□□ 0.36
SSBP4-214ENST00000607020 TCF7P36402 384 aaPredicted RBP17.27■□□□□ 0.36
SSBP4-214ENST00000607020 NUBP1P53384 320 aa17.27■□□□□ 0.36
SSBP4-214ENST00000607020 GRIK4Q16099 956 aa17.27■□□□□ 0.36
SSBP4-214ENST00000607020 CYB5R4Q7L1T6 521 aa17.27■□□□□ 0.36
SSBP4-214ENST00000607020 NLRX1Q86UT6 975 aa17.27■□□□□ 0.36
SSBP4-214ENST00000607020 ATP8B4Q8TF62 1192 aa17.27■□□□□ 0.36
SSBP4-214ENST00000607020 POF1BQ8WVV4 589 aa17.27■□□□□ 0.36
SSBP4-214ENST00000607020 SUSD6Q92537 303 aa17.27■□□□□ 0.36
SSBP4-214ENST00000607020 GPRASP2Q96D09 838 aa17.27■□□□□ 0.36
SSBP4-214ENST00000607020 ASIC4Q96FT7 647 aa17.27■□□□□ 0.36
SSBP4-214ENST00000607020 DIAPH3Q9NSV4 1193 aa17.27■□□□□ 0.36
SSBP4-214ENST00000607020 ERAP1Q9NZ08 941 aa17.27■□□□□ 0.36
SSBP4-214ENST00000607020 CDY2AQ9Y6F7 541 aa17.27■□□□□ 0.36
SSBP4-214ENST00000607020 GSTTP1A0A1W2PQM5 241 aa17.26■□□□□ 0.35
SSBP4-214ENST00000607020 FSD2A1L4K1 749 aa17.26■□□□□ 0.35
SSBP4-214ENST00000607020 RRN3P2A6NIE6 340 aa17.26■□□□□ 0.35
SSBP4-214ENST00000607020 NRIP1P48552 1158 aa17.26■□□□□ 0.35
SSBP4-214ENST00000607020 MRPS6P82932 125 aaKnown RBP17.26■□□□□ 0.35
SSBP4-214ENST00000607020 UBE3AQ05086 875 aa17.26■□□□□ 0.35
SSBP4-214ENST00000607020 TROAPQ12815 778 aa17.26■□□□□ 0.35
SSBP4-214ENST00000607020 IER5Q5VY09 327 aa17.26■□□□□ 0.35
SSBP4-214ENST00000607020 CDHR1Q96JP9 859 aa17.26■□□□□ 0.35
SSBP4-214ENST00000607020 LNPKQ9C0E8 428 aa17.26■□□□□ 0.35
SSBP4-214ENST00000607020 SMARCAD1Q9H4L7 1026 aa17.26■□□□□ 0.35
SSBP4-214ENST00000607020 C5orf42Q9H799 3197 aa17.26■□□□□ 0.35
SSBP4-214ENST00000607020 ZFHX2Q9C0A1 2572 aaPredicted RBP17.25■□□□□ 0.35
SSBP4-214ENST00000607020 MEIS2O14770 477 aa17.25■□□□□ 0.35
SSBP4-214ENST00000607020 ATP9AO75110 1047 aa17.25■□□□□ 0.35
SSBP4-214ENST00000607020 KCNA2P16389 499 aa17.25■□□□□ 0.35
SSBP4-214ENST00000607020 AVPR2P30518 371 aa17.25■□□□□ 0.35
SSBP4-214ENST00000607020 CD52P31358 61 aa17.25■□□□□ 0.35
SSBP4-214ENST00000607020 FOXK2Q01167 660 aa17.25■□□□□ 0.35
SSBP4-214ENST00000607020 SP4Q02446 784 aa17.25■□□□□ 0.35
SSBP4-214ENST00000607020 PLEKHM2Q8IWE5 1019 aa17.25■□□□□ 0.35
SSBP4-214ENST00000607020 CDCA3Q99618 268 aaPredicted RBP17.25■□□□□ 0.35
SSBP4-214ENST00000607020 RALGAPA2Q2PPJ7 1873 aa17.24■□□□□ 0.35
SSBP4-214ENST00000607020 GFRA3O60609 400 aa17.24■□□□□ 0.35
SSBP4-214ENST00000607020 TMEM184AQ6ZMB5 413 aa17.24■□□□□ 0.35
SSBP4-214ENST00000607020 SMC5Q8IY18 1101 aa17.24■□□□□ 0.35
SSBP4-214ENST00000607020 SMARCC2Q8TAQ2 1214 aa17.24■□□□□ 0.35
SSBP4-214ENST00000607020 TLE6Q9H808 572 aa17.24■□□□□ 0.35
SSBP4-214ENST00000607020 PADI3Q9ULW8 664 aa17.24■□□□□ 0.35
SSBP4-214ENST00000607020 BARX2Q9UMQ3 279 aaPredicted RBP17.24■□□□□ 0.35
SSBP4-214ENST00000607020 KDM3AQ9Y4C1 1321 aa17.23■□□□□ 0.35
SSBP4-214ENST00000607020 TTC3P53804 2025 aa17.23■□□□□ 0.35
SSBP4-214ENST00000607020 PROB1E7EW31 1015 aa17.23■□□□□ 0.35
SSBP4-214ENST00000607020 MAFGO15525 162 aa17.23■□□□□ 0.35
SSBP4-214ENST00000607020 CSPG5O95196 566 aa17.23■□□□□ 0.35
SSBP4-214ENST00000607020 SCG2P13521 617 aa17.23■□□□□ 0.35
SSBP4-214ENST00000607020 SMARCA1P28370 1054 aa17.23■□□□□ 0.35
SSBP4-214ENST00000607020 TRDNQ13061 729 aa17.23■□□□□ 0.35
SSBP4-214ENST00000607020 PDE12Q6L8Q7 609 aaKnown RBP17.23■□□□□ 0.35
SSBP4-214ENST00000607020 USP17L6PQ6QN14 398 aa17.23■□□□□ 0.35
SSBP4-214ENST00000607020 RBM23Q86U06 439 aaKnown RBP17.23■□□□□ 0.35
SSBP4-214ENST00000607020 GLG1Q92896 1179 aa17.23■□□□□ 0.35
SSBP4-214ENST00000607020 TNPO1Q92973 898 aaKnown RBP17.23■□□□□ 0.35
SSBP4-214ENST00000607020 CUL5Q93034 780 aa17.23■□□□□ 0.35
SSBP4-214ENST00000607020 RPGRIP1Q96KN7 1286 aa17.23■□□□□ 0.35
SSBP4-214ENST00000607020 TRPV2Q9Y5S1 764 aa17.23■□□□□ 0.35
SSBP4-214ENST00000607020 IGSF9BQ9UPX0 1349 aa17.22■□□□□ 0.35
SSBP4-214ENST00000607020 MYH7BA7E2Y1 1941 aa17.22■□□□□ 0.35
SSBP4-214ENST00000607020 IFIT3O14879 490 aaKnown RBP17.22■□□□□ 0.35
SSBP4-214ENST00000607020 INSRRP14616 1297 aa17.22■□□□□ 0.35
SSBP4-214ENST00000607020 ITGB5P18084 799 aa17.22■□□□□ 0.35
SSBP4-214ENST00000607020 MARK3P27448 753 aa17.22■□□□□ 0.35
SSBP4-214ENST00000607020 VCPP55072 806 aaKnown RBP17.22■□□□□ 0.35
SSBP4-214ENST00000607020 KCNC3Q14003 757 aa17.22■□□□□ 0.35
SSBP4-214ENST00000607020 PTPN21Q16825 1174 aa17.22■□□□□ 0.35
SSBP4-214ENST00000607020 DUSP6Q16828 381 aa17.22■□□□□ 0.35
SSBP4-214ENST00000607020 NME8Q8N427 588 aa17.22■□□□□ 0.35
SSBP4-214ENST00000607020 MAP3K14Q99558 947 aa17.22■□□□□ 0.35
SSBP4-214ENST00000607020 SPZ1Q9BXG8 430 aa17.22■□□□□ 0.35
SSBP4-214ENST00000607020 S1PR5Q9H228 398 aa17.22■□□□□ 0.35
SSBP4-214ENST00000607020 PCDHA2Q9Y5H9 948 aa17.22■□□□□ 0.35
SSBP4-214ENST00000607020 UBIAD1Q9Y5Z9 338 aa17.22■□□□□ 0.35
SSBP4-214ENST00000607020 M0QZ92 97 aa17.21■□□□□ 0.35
SSBP4-214ENST00000607020 FSCN2O14926 492 aa17.21■□□□□ 0.35
SSBP4-214ENST00000607020 SARSP49591 514 aaKnown RBP17.21■□□□□ 0.35
SSBP4-214ENST00000607020 VN1R2Q8NFZ6 395 aa17.21■□□□□ 0.35
SSBP4-214ENST00000607020 RASGRP4Q8TDF6 673 aa17.21■□□□□ 0.35
SSBP4-214ENST00000607020 MICAL1Q8TDZ2 1067 aa17.21■□□□□ 0.35
SSBP4-214ENST00000607020 ATOH1Q92858 354 aaPredicted RBP17.21■□□□□ 0.35
SSBP4-214ENST00000607020 NEK1Q96PY6 1258 aa17.21■□□□□ 0.35
SSBP4-214ENST00000607020 PCYT2Q99447 389 aa17.21■□□□□ 0.35
SSBP4-214ENST00000607020 CELF4Q9BZC1 486 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms