RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 PGBD1Q96JS3 809 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 C17orf80Q9BSJ5 609 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 IFIH1Q9BYX4 1025 aaKnown RBP8.71□□□□□ -1.02
CUX1-219ENST00000606749 GLT8D2Q9H1C3 349 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 AGO4Q9HCK5 861 aaKnown RBP8.71□□□□□ -1.02
CUX1-219ENST00000606749 JPH1Q9HDC5 661 aaPredicted RBP8.71□□□□□ -1.02
CUX1-219ENST00000606749 TMEM260Q9NX78 707 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 TUBE1Q9UJT0 475 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 MUC3AQ02505 3323 aa8.71□□□□□ -1.02
CUX1-219ENST00000606749 KAT6AQ92794 2004 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 RRN3P2A6NIE6 340 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 hCG_1984214I3L0E3 225 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 ENPP3O14638 875 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 ATG7O95352 703 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 GHRP10912 638 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 INSRRP14616 1297 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 HSPA4P34932 840 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 SREBF1P36956 1147 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 STAT5BP51692 787 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 ACTR2P61160 394 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 IGBP1P78318 339 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 APOBRQ0VD83 1088 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 LPIN1Q14693 890 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 EPC2Q52LR7 807 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 Q6ZUG5 572 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 PLPPR4Q7Z2D5 763 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 RSPH3Q86UC2 560 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 ZNF713Q8N859 430 aaPredicted RBP8.7□□□□□ -1.02
CUX1-219ENST00000606749 FBXO22Q8NEZ5 403 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 ZBTB10Q96DT7 871 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 NECAB3Q96P71 396 aaPredicted RBP8.7□□□□□ -1.02
CUX1-219ENST00000606749 YME1L1Q96TA2 773 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 SDF4Q9BRK5 362 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 ANO3Q9BYT9 981 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 AZI2Q9H6S1 392 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 NAP1L2Q9ULW6 460 aaPredicted RBP8.7□□□□□ -1.02
CUX1-219ENST00000606749 NFASCO94856 1347 aa8.7□□□□□ -1.02
CUX1-219ENST00000606749 TCF20Q9UGU0 1960 aaKnown RBP8.7□□□□□ -1.02
CUX1-219ENST00000606749 IGKV6D-21A0A0A0MT36 114 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.69□□□□□ -1.02
CUX1-219ENST00000606749 CCDC196A0A1B0GTZ2 297 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 H3BNC9 293 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 ADAMTS3O15072 1205 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 ZNF76P36508 570 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 METAP2P50579 478 aaKnown RBP eCLIP8.69□□□□□ -1.02
CUX1-219ENST00000606749 FGD1P98174 961 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 ITGB3BPQ13352 177 aaPredicted RBP8.69□□□□□ -1.02
CUX1-219ENST00000606749 AP3B2Q13367 1082 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 PLCB4Q15147 1175 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 PKN1Q16512 942 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 PFKFB3Q16875 520 aaPredicted RBP8.69□□□□□ -1.02
CUX1-219ENST00000606749 FBXO47Q5MNV8 452 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 JAKMIP3Q5VZ66 844 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 NIPA1Q7RTP0 329 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 TMEM192Q8IY95 271 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 FBXL16Q8N461 479 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 CRYGNQ8WXF5 182 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 TNPO1Q92973 898 aaKnown RBP8.69□□□□□ -1.02
CUX1-219ENST00000606749 BRF1Q92994 677 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 IL17RAQ96F46 866 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 JAKMIP1Q96N16 626 aaKnown RBP8.69□□□□□ -1.02
CUX1-219ENST00000606749 SAMD11Q96NU1 681 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 ZMYND12Q9H0C1 365 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 AGO3Q9H9G7 860 aaKnown RBP8.69□□□□□ -1.02
CUX1-219ENST00000606749 PCDHA2Q9Y5H9 948 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 SNX14Q9Y5W7 946 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 CDY2AQ9Y6F7 541 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 MICAL3Q7RTP6 2002 aa8.69□□□□□ -1.02
CUX1-219ENST00000606749 POTEB3A0JP26 581 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 FAM86B1E9PN63 330 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 DHX15O43143 795 aaKnown RBP8.68□□□□□ -1.02
CUX1-219ENST00000606749 PRPF3O43395 683 aaKnown RBP8.68□□□□□ -1.02
CUX1-219ENST00000606749 CCNE2O96020 404 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 RPLP2P05387 115 aaKnown RBP8.68□□□□□ -1.02
CUX1-219ENST00000606749 CYP3A4P08684 503 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 FAM86B2P0C5J1 330 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 SCG2P13521 617 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 MRPS6P82932 125 aaKnown RBP8.68□□□□□ -1.02
CUX1-219ENST00000606749 GPM6BQ13491 265 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 IER5Q5VY09 327 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 BLOC1S2Q6QNY1 142 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 POTEBQ6S5H4 581 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 MTHFD1LQ6UB35 978 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 ABHD15Q6UXT9 468 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 TSHZ1Q6ZSZ6 1077 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 RTN4RL1Q86UN2 441 aaPredicted RBP8.68□□□□□ -1.02
CUX1-219ENST00000606749 PLA2G4DQ86XP0 818 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 NME8Q8N427 588 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 TRAPPC12Q8WVT3 735 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 MRPL38Q96DV4 380 aaKnown RBP8.68□□□□□ -1.02
CUX1-219ENST00000606749 CCDC136Q96JN2 1154 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 AGXT2Q9BYV1 514 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 FAM49AQ9H0Q0 323 aaPredicted RBP8.68□□□□□ -1.02
CUX1-219ENST00000606749 TRPC6Q9Y210 931 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 SQORQ9Y6N5 450 aa8.68□□□□□ -1.02
CUX1-219ENST00000606749 IGLV3-22A0A075B6J6 115 aa8.67□□□□□ -1.02
CUX1-219ENST00000606749 SMIM35A0A1B0GVV1 85 aa8.67□□□□□ -1.02
CUX1-219ENST00000606749 ESYT2A0FGR8 921 aa8.67□□□□□ -1.02
CUX1-219ENST00000606749 C5orf67F2Z3F1 127 aa8.67□□□□□ -1.02
CUX1-219ENST00000606749 DDX39AO00148 427 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms