RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 SCRN1Q12765 414 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 KCNB1Q14721 858 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 HSP90AA4PQ58FG1 418 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 CCDC183Q5T5S1 534 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 MCTP1Q6DN14 999 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 CWC27Q6UX04 472 aaKnown RBP6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 FAM196AQ6ZSG2 479 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 KIAA0907Q7Z7F0 614 aaPredicted RBP6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 HERVK_113Q902F9 699 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 SHC3Q92529 594 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 CMTM3Q96MX0 182 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 JAKMIP1Q96N16 626 aaKnown RBP6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 ZSCAN16Q9H4T2 348 aaPredicted RBP6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 VPS45Q9NRW7 570 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 MOCS1Q9NZB8 636 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 PDP2Q9P2J9 529 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 NFKBIL1Q9UBC1 381 aaPredicted RBP6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 HESX1Q9UBX0 185 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 TRAF3IP3Q9Y228 551 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 CLTCL1P53675 1640 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 ANO9A1A5B4 782 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 AHCYL1O43865 530 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 HNRNPH1P31943 449 aaKnown RBP6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 ECE1P42892 770 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 HNRNPUQ00839 825 aaKnown RBP eCLIP6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 BEX3Q00994 111 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 CETN1Q12798 172 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 PSMD6Q15008 389 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 RAB3GAP1Q15042 981 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 KRT27Q7Z3Y8 459 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 GATAD2AQ86YP4 633 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 ARRDC4Q8NCT1 418 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 GDAP1Q8TB36 358 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 SLC22A8Q8TCC7 542 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 SPDL1Q96EA4 605 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 PDLIM2Q96JY6 352 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 XAB2Q9HCS7 855 aaKnown RBP6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 ARGLU1Q9NWB6 273 aaPredicted RBP6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 RRN3Q9NYV6 651 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 FNIP2Q9P278 1114 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 MTRF1LQ9UGC7 380 aaKnown RBP6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 DLEC1Q9Y238 1755 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 TARSL2A2RTX5 802 aaKnown RBP6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 UBAP1LF5GYI3 381 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 E2F3O00716 465 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 NCK2O43639 380 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 ZEB2O60315 1214 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 USP2O75604 605 aaPredicted RBP6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 ERLIN2O94905 339 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 KRT14P02533 472 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 NFKBIAP25963 317 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 GNL1P36915 607 aaPredicted RBP6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 ASMTP46597 345 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 LETM2Q2VYF4 491 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 TEX35Q5T0J7 233 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 SLC30A9Q6PML9 568 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 ABRAXAS1Q6UWZ7 409 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 PXYLP1Q8TE99 480 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 RADILQ96JH8 1075 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 PTBP2Q9UKA9 531 aaKnown RBP6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 KIAA1551Q9HCM1 1747 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 LOC102724428A0A0B4J2F2 783 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 GOLGA6L7A0A1B0GV03 622 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 GOLGA8MH3BSY2 632 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 VWA5AO00534 786 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 DDHD2O94830 711 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 DNTTP04053 509 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 FESP07332 822 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 ARHGDIBP52566 201 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 CLNS1AP54105 237 aaKnown RBP6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 SIK1P57059 783 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 CORO7P57737 925 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 MLC1Q15049 377 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 SAFBQ15424 915 aaKnown RBP eCLIP6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 ZNF772Q68DY9 489 aaPredicted RBP6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 TRMT2AQ8IZ69 625 aaKnown RBP6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 TMEM57Q8N5G2 664 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 NOC3LQ8WTT2 800 aaKnown RBP6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 INTS12Q96CB8 462 aaKnown RBP6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 CCDC106Q9BWC9 280 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 CLK4Q9HAZ1 481 aaKnown RBP6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 MCM9Q9NXL9 1143 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 IL20Q9NYY1 176 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 DUSP12Q9UNI6 340 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 ZSCAN5CA6NGD5 496 aaPredicted RBP6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 CCDC192P0DO97 292 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 GARTP22102 1010 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 COL18A1P39060 1754 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 GUCY2FP51841 1108 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 TWF2Q6IBS0 349 aaKnown RBP6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 DPY19L2Q6NUT2 758 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 SLC9B2Q86UD5 537 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 PALB2Q86YC2 1186 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 OR8K1Q8NGG5 319 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 FAM167AQ96KS9 214 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 SAMD11Q96NU1 681 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 CATSPER2Q96P56 530 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 TUBA1CQ9BQE3 449 aa6.36□□□□□ -1.39
COL4A3BP-207ENST00000604926 GORASP1Q9BQQ3 440 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms