RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 SCINQ9Y6U3 715 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 MAGEB6P1A0A0J9YX57 407 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 GOLGA6CA6NDK9 693 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 GOLGA6BA6NDN3 693 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 TRIM75PA6NK02 468 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 ARHGAP33O14559 1287 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 GOLGA6DP0CG33 693 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 IMPDH2P12268 514 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 GBP2P32456 591 aaPredicted RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 MAGEA9P43362 315 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 LMNB2Q03252 620 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 ADGRE1Q14246 886 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 TTF1Q15361 905 aaPredicted RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 TMEM31Q5JXX7 168 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 DIEXFQ68CQ4 756 aaKnown RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 WWC2Q6AWC2 1192 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 CEP85Q6P2H3 762 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 IFNL3Q8IZI9 196 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 USP38Q8NB14 1042 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 RBBP8NLQ8NC74 664 aaPredicted RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 GMCL1P1Q8NEA9 526 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 LRRC3Q9BY71 257 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 GOLGA6AQ9NYA3 693 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 RPS6KL1Q9Y6S9 549 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 GLRX3O76003 335 aaKnown RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 BPNT1O95861 308 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 CAPNS1P04632 268 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 GARTP22102 1010 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 BDNFP23560 247 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 HERVK_113P62684 666 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 ATP8B2P98198 1209 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 EXOSC9Q06265 439 aaKnown RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 RRP1BQ14684 758 aaKnown RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 SMAD2Q15796 467 aaKnown RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 TMEM67Q5HYA8 995 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 KIAA0319Q5VV43 1072 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 NFRKBQ6P4R8 1299 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 THNSL2Q86YJ6 484 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 CACTIN-AS1Q8N1I8 211 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 NSUN4Q96CB9 384 aaKnown RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 RHOVQ96L33 236 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 CTAGE1Q96RT6 745 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 KCTD15Q96SI1 283 aaPredicted RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 MYCBPQ99417 103 aaPredicted RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 SPSB2Q99619 263 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 PLVAPQ9BX97 442 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 BCO2Q9BYV7 579 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 TMEM39BQ9GZU3 492 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 MAP3K20Q9NYL2 800 aaKnown RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 SERTAD1Q9UHV2 236 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 PCDHB3Q9Y5E6 796 aa3.38□□□□□ -1.87
VCAM1-205ENST00000603679 GPC6Q9Y625 555 aaPredicted RBP3.38□□□□□ -1.87
VCAM1-205ENST00000603679 FOSP01100 380 aaPredicted RBP3.37□□□□□ -1.87
VCAM1-205ENST00000603679 ASNSP08243 561 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 ZKSCAN1P17029 563 aaPredicted RBP3.37□□□□□ -1.87
VCAM1-205ENST00000603679 GTF2E1P29083 439 aaPredicted RBP3.37□□□□□ -1.87
VCAM1-205ENST00000603679 SH3BGRP55822 239 aaPredicted RBP3.37□□□□□ -1.87
VCAM1-205ENST00000603679 TREML2Q5T2D2 321 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 PDE12Q6L8Q7 609 aaKnown RBP3.37□□□□□ -1.87
VCAM1-205ENST00000603679 BTNL9Q6UXG8 535 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 DDX42Q86XP3 938 aaKnown RBP eCLIP3.37□□□□□ -1.87
VCAM1-205ENST00000603679 ADHFE1Q8IWW8 467 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 PRSS33Q8NF86 280 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 SNRNP27Q8WVK2 155 aaKnown RBP3.37□□□□□ -1.87
VCAM1-205ENST00000603679 KCNN1Q92952 543 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 ANAPC16Q96DE5 110 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 CEP63Q96MT8 703 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 RNF208Q9H0X6 261 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 ETNK1Q9HBU6 452 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 RXFP3Q9NSD7 469 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 MAP3K2Q9Y2U5 619 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 PRUNE2Q8WUY3 3088 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 ARVCFO00192 962 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 EML1O00423 815 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 INPPL1O15357 1258 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 LILRB5O75023 590 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 LRP3O75074 770 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 GPTP24298 496 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 EPHB4P54760 987 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 ZP2Q05996 745 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 TCF15Q12870 199 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 AGERQ15109 404 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 GRIK5Q16478 980 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 SBK1Q52WX2 424 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 CHPFQ8IZ52 775 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 MYO1HQ8N1T3 1032 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 ZNF511Q8NB15 262 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 EPS8L3Q8TE67 593 aaKnown RBP3.37□□□□□ -1.87
VCAM1-205ENST00000603679 ANKS1AQ92625 1134 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 EDAQ92838 391 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 ZNF689Q96CS4 500 aaPredicted RBP3.37□□□□□ -1.87
VCAM1-205ENST00000603679 MAML3Q96JK9 1138 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 WRNIP1Q96S55 665 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 PBX4Q9BYU1 374 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.37□□□□□ -1.87
VCAM1-205ENST00000603679 DLL3Q9NYJ7 618 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 RWDD3Q9Y3V2 267 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 A0A1W2PQ45 241 aaPredicted RBP3.37□□□□□ -1.87
VCAM1-205ENST00000603679 A0A1W2PQY0 241 aa3.37□□□□□ -1.87
VCAM1-205ENST00000603679 NRDCO43847 1150 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms