RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 FNDC3AQ9Y2H6 1198 aaKnown RBP10.33□□□□□ -0.76
CSMD1-217ENST00000602723 WARS2Q9UGM6 360 aaKnown RBP10.32□□□□□ -0.76
CSMD1-217ENST00000602723 TRIM33Q9UPN9 1127 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 TMEM232C9JQI7 657 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 CHGBP05060 677 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 SLFN14P0C7P3 912 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 GYG1P46976 350 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 NUGGCQ68CJ6 796 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 RNF26Q9BY78 433 aaPredicted RBP10.32□□□□□ -0.76
CSMD1-217ENST00000602723 RPS8P62241 208 aaKnown RBP10.32□□□□□ -0.76
CSMD1-217ENST00000602723 MYO1EQ12965 1108 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 CDC26Q8NHZ8 85 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 SLC7A3Q8WY07 619 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 APOL6Q9BWW8 343 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 USP44Q9H0E7 712 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 AS3MTQ9HBK9 375 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.32□□□□□ -0.76
CSMD1-217ENST00000602723 AKT3Q9Y243 479 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 ABCD1P33897 745 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 DHX38Q92620 1227 aaKnown RBP10.32□□□□□ -0.76
CSMD1-217ENST00000602723 MAP2P11137 1827 aaKnown RBP10.32□□□□□ -0.76
CSMD1-217ENST00000602723 PPIP5K2O43314 1243 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 DCAF15Q66K64 600 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 CCDC24Q8N4L8 307 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 KMT5AQ9NQR1 393 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 SLC4A7Q9Y6M7 1214 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 ATP10BO94823 1461 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 HSPA4LO95757 839 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 TAC1P20366 129 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 PRPF38AQ8NAV1 312 aaKnown RBP10.32□□□□□ -0.76
CSMD1-217ENST00000602723 EAF2Q96CJ1 260 aaPredicted RBP10.32□□□□□ -0.76
CSMD1-217ENST00000602723 SLC12A6Q9UHW9 1150 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 E2F6O75461 281 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 PLCG1P19174 1290 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 IGBP1P78318 339 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 TCIRG1Q13488 830 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 ABCB5Q2M3G0 1257 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 EPM2AIP1Q7L775 607 aaPredicted RBP10.32□□□□□ -0.76
CSMD1-217ENST00000602723 CITO14578 2027 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 DAB2P98082 770 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 FSCBQ5H9T9 825 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 TRIM55Q9BYV6 548 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 NRBP2Q9NSY0 501 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 CPSF3Q9UKF6 684 aaKnown RBP10.32□□□□□ -0.76
CSMD1-217ENST00000602723 TMEM247A6NEH6 219 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 ARHGDIAP52565 204 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 KRT31Q15323 416 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 ZNF577Q9BSK1 485 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 TRPV6Q9H1D0 765 aa10.32□□□□□ -0.76
CSMD1-217ENST00000602723 MYH15Q9Y2K3 1946 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 NOP14P78316 857 aaKnown RBP10.31□□□□□ -0.76
CSMD1-217ENST00000602723 MORF4L2Q15014 288 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 HABP4Q5JVS0 413 aaKnown RBP10.31□□□□□ -0.76
CSMD1-217ENST00000602723 SLFN13Q68D06 897 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 SUN2Q9UH99 717 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 MYO1CO00159 1063 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 KRT37O76014 449 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 SCNN1DP51172 638 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 GTF2IP78347 998 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 APOA5Q6Q788 366 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 EXT2Q93063 718 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 ZNF496Q96IT1 587 aaPredicted RBP10.31□□□□□ -0.76
CSMD1-217ENST00000602723 LRRC37BQ96QE4 947 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 CCDC195A0A1B0GUA6 201 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 LRRC63Q05C16 580 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 SAAL1Q96ER3 474 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 DACH2Q96NX9 599 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 AMNQ9BXJ7 453 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 TEX12Q9BXU0 123 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 CYP27A1Q02318 531 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 BEND6Q5SZJ8 279 aaPredicted RBP10.31□□□□□ -0.76
CSMD1-217ENST00000602723 GTPBP10A4D1E9 387 aaKnown RBP10.31□□□□□ -0.76
CSMD1-217ENST00000602723 XPOTO43592 962 aaKnown RBP10.31□□□□□ -0.76
CSMD1-217ENST00000602723 ZFXP17010 805 aaPredicted RBP10.31□□□□□ -0.76
CSMD1-217ENST00000602723 BTDP43251 543 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 MXI1P50539 228 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 TBC1D10BQ4KMP7 808 aaPredicted RBP10.31□□□□□ -0.76
CSMD1-217ENST00000602723 RNF207Q6ZRF8 634 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 ACAD11Q709F0 780 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 SIX6OS1Q8N1H7 587 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 APOBEC2Q9Y235 224 aaKnown RBP10.31□□□□□ -0.76
CSMD1-217ENST00000602723 L3MBTL1Q9Y468 752 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 RNF123Q5XPI4 1314 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 TTLL1O95922 423 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 PSMA2P25787 234 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 PDCLQ13371 301 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 TOGARAM2Q6ZUX3 1019 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 WDR64B1ANS9 1081 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 ALDH1B1P30837 517 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 KRT39Q6A163 491 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 NBPF10Q6P3W6 841 aaKnown RBP10.31□□□□□ -0.76
CSMD1-217ENST00000602723 NSUN7Q8NE18 718 aaKnown RBP10.31□□□□□ -0.76
CSMD1-217ENST00000602723 ELAC2Q9BQ52 826 aaKnown RBP10.31□□□□□ -0.76
CSMD1-217ENST00000602723 RASA4BC9J798 803 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 RASA4O43374 803 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 MFAP3LO75121 409 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 ADORA1P30542 326 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 NEK2P51955 445 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 ARL4CP56559 192 aa10.31□□□□□ -0.76
CSMD1-217ENST00000602723 AP2B1P63010 937 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms