RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 MYLK4Q86YV6 388 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-216ENST00000602557 TGS1Q96RS0 853 aaKnown RBP9.35□□□□□ -0.91
CSMD1-216ENST00000602557 TUBGCP2Q9BSJ2 902 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 ESYT3A0FGR9 886 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 SYCE1LA8MT33 242 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 NVLO15381 856 aaKnown RBP9.35□□□□□ -0.91
CSMD1-216ENST00000602557 KRT8P05787 483 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 H2AFZP0C0S5 128 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 KITP10721 976 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 RBM6P78332 1123 aaKnown RBP9.35□□□□□ -0.91
CSMD1-216ENST00000602557 TRAF7Q6Q0C0 670 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 H2AFVQ71UI9 128 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 KIF24Q5T7B8 1368 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 HNRNPCL2B2RXH8 293 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 HNRNPCL1O60812 293 aaKnown RBP9.35□□□□□ -0.91
CSMD1-216ENST00000602557 FGAP02671 866 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 KLC1Q07866 573 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 ODR4Q5SWX8 454 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 HEATR4Q86WZ0 1026 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 SIX5Q8N196 739 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 FMO2Q99518 471 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 TUBB6Q9BUF5 446 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 PER1O15534 1290 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-216ENST00000602557 CARSP49589 748 aaKnown RBP9.35□□□□□ -0.91
CSMD1-216ENST00000602557 DLGAP5Q15398 846 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 ANKRD35Q8N283 1001 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 TEX9Q8N6V9 391 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 WDR24Q96S15 920 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 TMEM165Q9HC07 324 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 CFAP74Q9C0B2 1584 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 MT-ND3P03897 115 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 TMEM191BP0C7N4 346 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 GTF2IP78347 998 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 EMBQ6PCB8 327 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 CHURC1Q8WUH1 139 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 RNF123Q5XPI4 1314 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 KDM5CP41229 1560 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 DDAH1O94760 285 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 CEP55Q53EZ4 464 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 FAM47CQ5HY64 1035 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 ZNF710Q8N1W2 664 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 CARD9Q9H257 536 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 KCNF1Q9H3M0 494 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 STK32BQ9NY57 414 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 PRDM4Q9UKN5 801 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 TCHHQ07283 1943 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 H0YCG3 227 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 EIF4A3P38919 411 aaKnown RBP9.35□□□□□ -0.91
CSMD1-216ENST00000602557 STAT2P52630 851 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 HADHQ16836 314 aaKnown RBP9.35□□□□□ -0.91
CSMD1-216ENST00000602557 SPDYE1Q8NFV5 336 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-216ENST00000602557 CCDC124Q96CT7 223 aaKnown RBP9.35□□□□□ -0.91
CSMD1-216ENST00000602557 TEKT2Q9UIF3 430 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 MKL2Q9ULH7 1088 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 ICA1Q05084 483 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 CCDC85BQ15834 202 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-216ENST00000602557 RUNDC3BQ96NL0 473 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 DACH2Q96NX9 599 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 USP44Q9H0E7 712 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 FGFR1OP2Q9NVK5 253 aa9.35□□□□□ -0.91
CSMD1-216ENST00000602557 KDM5DQ9BY66 1539 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 NPC1L1Q9UHC9 1359 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 ATP5HO75947 161 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 PDE5AO76074 875 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 SEC24DO94855 1032 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-216ENST00000602557 KIF11P52732 1056 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 EAF2Q96CJ1 260 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-216ENST00000602557 KLHL25Q9H0H3 589 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 PDE1BQ01064 536 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 MDH1BQ5I0G3 518 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 ARHGAP22Q7Z5H3 698 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 RFX6Q8HWS3 928 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 OLFML3Q9NRN5 406 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 MEFVO15553 781 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-216ENST00000602557 NR2F2P24468 414 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 CYLC2Q14093 348 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-216ENST00000602557 RASSF3Q86WH2 238 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 SPICE1Q8N0Z3 855 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 PCDHA13Q9Y5I0 950 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 EIF4A1P60842 406 aaKnown RBP9.34□□□□□ -0.91
CSMD1-216ENST00000602557 ARMCX5Q6P1M9 558 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 HESX1Q9UBX0 185 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 ABCC12Q96J65 1359 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 TCP11X1B4DZS4 312 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 PDHBP11177 359 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 VSNL1P62760 191 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 CNGB3Q9NQW8 809 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 IGF2BP3O00425 579 aaKnown RBP eCLIP9.34□□□□□ -0.91
CSMD1-216ENST00000602557 CCDC144BQ3MJ40 725 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 MLXIPQ9HAP2 919 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 IPO11Q9UI26 975 aaKnown RBP9.34□□□□□ -0.91
CSMD1-216ENST00000602557 KCNG1Q9UIX4 513 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 LRRC14Q15048 493 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 CATSPER3Q86XQ3 398 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 MCUQ8NE86 351 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 OMA1Q96E52 524 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 NDEL1Q9GZM8 345 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 E9PMD0 336 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 TRIM37O94972 964 aa9.34□□□□□ -0.91
CSMD1-216ENST00000602557 CA4P22748 312 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms