RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 PCDHGB3Q9Y5G1 929 aa8.36□□□□□ -1.07
HCG18-244ENST00000602516 CLIC4Q9Y696 253 aa8.36□□□□□ -1.07
HCG18-244ENST00000602516 SLC4A4Q9Y6R1 1079 aa8.36□□□□□ -1.07
HCG18-244ENST00000602516 TMEM247A6NEH6 219 aa8.36□□□□□ -1.07
HCG18-244ENST00000602516 GPR37O15354 613 aa8.36□□□□□ -1.07
HCG18-244ENST00000602516 BCRP11274 1271 aa8.36□□□□□ -1.07
HCG18-244ENST00000602516 CUL3Q13618 768 aa8.36□□□□□ -1.07
HCG18-244ENST00000602516 ACAP1Q15027 740 aa8.36□□□□□ -1.07
HCG18-244ENST00000602516 TMEM67Q5HYA8 995 aa8.36□□□□□ -1.07
HCG18-244ENST00000602516 POTEEQ6S8J3 1075 aa8.36□□□□□ -1.07
HCG18-244ENST00000602516 MFSD6Q6ZSS7 791 aa8.36□□□□□ -1.07
HCG18-244ENST00000602516 ADGRA1Q86SQ6 560 aa8.36□□□□□ -1.07
HCG18-244ENST00000602516 DAAM2Q86T65 1068 aa8.36□□□□□ -1.07
HCG18-244ENST00000602516 PPP1R14BQ96C90 147 aa8.36□□□□□ -1.07
HCG18-244ENST00000602516 BEGAINQ9BUH8 593 aa8.36□□□□□ -1.07
HCG18-244ENST00000602516 ZCCHC17Q9NP64 241 aaKnown RBP8.36□□□□□ -1.07
HCG18-244ENST00000602516 FANCFQ9NPI8 374 aa8.36□□□□□ -1.07
HCG18-244ENST00000602516 LRP2BPQ9P2M1 347 aa8.36□□□□□ -1.07
HCG18-244ENST00000602516 DDX25Q9UHL0 483 aaKnown RBP8.36□□□□□ -1.07
HCG18-244ENST00000602516 KIAA1257Q9ULG3 409 aa8.36□□□□□ -1.07
HCG18-244ENST00000602516 TTC34A8MYJ7 566 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 RANBP6O60518 1105 aaKnown RBP8.35□□□□□ -1.07
HCG18-244ENST00000602516 ZBED4O75132 1171 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 POLR3DP05423 398 aaPredicted RBP8.35□□□□□ -1.07
HCG18-244ENST00000602516 GYG1P46976 350 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 ME1P48163 572 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 CENPAP49450 140 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 PABPC1LQ4VXU2 614 aaKnown RBP8.35□□□□□ -1.07
HCG18-244ENST00000602516 PTF1AQ7RTS3 328 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 NOP9Q86U38 636 aaKnown RBP8.35□□□□□ -1.07
HCG18-244ENST00000602516 LRRC43Q8N309 656 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 MRPS27Q92552 414 aaKnown RBP8.35□□□□□ -1.07
HCG18-244ENST00000602516 SNX27Q96L92 541 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 RIOK1Q9BRS2 568 aaKnown RBP8.35□□□□□ -1.07
HCG18-244ENST00000602516 ALG1Q9BT22 464 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 NYXQ9GZU5 481 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 KRT82Q9NSB4 513 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 DKK3Q9UBP4 350 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 EVLQ9UI08 416 aaPredicted RBP8.35□□□□□ -1.07
HCG18-244ENST00000602516 EFR3BQ9Y2G0 817 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 GMEB1Q9Y692 573 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 SBF2Q86WG5 1849 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 DLEC1Q9Y238 1755 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 PDS5AQ29RF7 1337 aaKnown RBP8.35□□□□□ -1.07
HCG18-244ENST00000602516 BRWD3Q6RI45 1802 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 WTIPA6NIX2 430 aaPredicted RBP8.35□□□□□ -1.07
HCG18-244ENST00000602516 IFIT3O14879 490 aaKnown RBP8.35□□□□□ -1.07
HCG18-244ENST00000602516 MGEA5O60502 916 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 PCNAP12004 261 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 ZNF165P49910 485 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 CYP4A11Q02928 519 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 SYCP2LQ5T4T6 812 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 FBXO33Q7Z6M2 555 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 RAVER1Q8IY67 606 aaKnown RBP8.35□□□□□ -1.07
HCG18-244ENST00000602516 CCDC144CPQ8IYA2 1237 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 FSIP1Q8NA03 581 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 JDP2Q8WYK2 163 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 CELF1Q92879 486 aaKnown RBP8.35□□□□□ -1.07
HCG18-244ENST00000602516 KHSRPQ92945 711 aaKnown RBP eCLIP8.35□□□□□ -1.07
HCG18-244ENST00000602516 FAM84BQ96KN1 310 aaPredicted RBP8.35□□□□□ -1.07
HCG18-244ENST00000602516 ALPK1Q96QP1 1244 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 ZCWPW1Q9H0M4 648 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 PLSCR2Q9NRY7 297 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 TYW1Q9NV66 732 aaKnown RBP8.35□□□□□ -1.07
HCG18-244ENST00000602516 COL4A3BPQ9Y5P4 624 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 KIAA1551Q9HCM1 1747 aa8.35□□□□□ -1.07
HCG18-244ENST00000602516 ERICH2A1L162 156 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 FOXN3O00409 490 aaPredicted RBP8.34□□□□□ -1.07
HCG18-244ENST00000602516 BIN1O00499 593 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 MUSKO15146 869 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 B4GALT4O60513 344 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 GLULP15104 373 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 IFNAR1P17181 557 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 RXRAP19793 462 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 CYP7A1P22680 504 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 IARSP41252 1262 aaKnown RBP8.34□□□□□ -1.07
HCG18-244ENST00000602516 KCNQ4P56696 695 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 CAVIN4Q5BKX8 364 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 LDLRAD1Q5T700 205 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 ANO1Q5XXA6 986 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 KRT40Q6A162 431 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 KRT27Q7Z3Y8 459 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 MICU3Q86XE3 530 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 PLA2G4DQ86XP0 818 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 GALNT15Q8N3T1 639 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 PAF1Q8N7H5 531 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 C7orf57Q8NEG2 295 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 AIFM3Q96NN9 605 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 CTAGE1Q96RT6 745 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 FNBP1Q96RU3 617 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 SRPK1Q96SB4 655 aaKnown RBP8.34□□□□□ -1.07
HCG18-244ENST00000602516 TCF12Q99081 682 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 DNAJC25Q9H1X3 360 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 RNF41Q9H4P4 317 aaPredicted RBP8.34□□□□□ -1.07
HCG18-244ENST00000602516 CEP131Q9UPN4 1083 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 SLC12A7Q9Y666 1083 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 BAZ2AQ9UIF9 1905 aaKnown RBP8.34□□□□□ -1.07
HCG18-244ENST00000602516 SKIP12755 728 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 GYS1P13807 737 aa8.34□□□□□ -1.07
HCG18-244ENST00000602516 SMTNP53814 917 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms