RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 ZMYND8Q9ULU4 1186 aaPredicted RBP12.95□□□□□ -0.34
ZNF548-211ENST00000600927 COLQQ9Y215 455 aaPredicted RBP12.95□□□□□ -0.34
ZNF548-211ENST00000600927 DYNC1LI2O43237 492 aaPredicted RBP12.94□□□□□ -0.34
ZNF548-211ENST00000600927 ACTN4O43707 911 aaKnown RBP12.94□□□□□ -0.34
ZNF548-211ENST00000600927 EDIL3O43854 480 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 CABYRO75952 493 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 SMC2O95347 1197 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 UBA7P41226 1012 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 ZNF165P49910 485 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 CCDC173Q0VFZ6 552 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 TTLL4Q14679 1199 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 POSTNQ15063 836 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 IL17AQ16552 155 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 CALCRLQ16602 461 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 EPSTI1Q96J88 318 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 FAM20AQ96MK3 541 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 TOX2Q96NM4 488 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 GSDMAQ96QA5 445 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 PPP1R9BQ96SB3 815 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 TMEM60Q9H2L4 133 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 STARD7Q9NQZ5 370 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 PDLIM7Q9NR12 457 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 TMEM260Q9NX78 707 aa12.94□□□□□ -0.34
ZNF548-211ENST00000600927 GRIN2DO15399 1336 aa12.93□□□□□ -0.34
ZNF548-211ENST00000600927 A0A0U1RQG5 324 aaPredicted RBP12.93□□□□□ -0.34
ZNF548-211ENST00000600927 A6NJR5 290 aa12.93□□□□□ -0.34
ZNF548-211ENST00000600927 SYN1P17600 705 aa12.93□□□□□ -0.34
ZNF548-211ENST00000600927 BMP8BP34820 402 aa12.93□□□□□ -0.34
ZNF548-211ENST00000600927 MRPS9P82933 396 aaKnown RBP12.93□□□□□ -0.34
ZNF548-211ENST00000600927 ARHGAP4P98171 946 aa12.93□□□□□ -0.34
ZNF548-211ENST00000600927 ARHGAP1Q07960 439 aa12.93□□□□□ -0.34
ZNF548-211ENST00000600927 E2F4Q16254 413 aa12.93□□□□□ -0.34
ZNF548-211ENST00000600927 UBE2SQ16763 222 aa12.93□□□□□ -0.34
ZNF548-211ENST00000600927 ANO6Q4KMQ2 910 aa12.93□□□□□ -0.34
ZNF548-211ENST00000600927 USP17L6PQ6QN14 398 aa12.93□□□□□ -0.34
ZNF548-211ENST00000600927 COPS5Q92905 334 aa12.93□□□□□ -0.34
ZNF548-211ENST00000600927 EMID1Q96A84 441 aaPredicted RBP12.93□□□□□ -0.34
ZNF548-211ENST00000600927 GLT1D1Q96MS3 346 aa12.93□□□□□ -0.34
ZNF548-211ENST00000600927 INPP4AQ96PE3 977 aaPredicted RBP12.93□□□□□ -0.34
ZNF548-211ENST00000600927 AP5M1Q9H0R1 490 aa12.93□□□□□ -0.34
ZNF548-211ENST00000600927 DDX25Q9UHL0 483 aaKnown RBP12.93□□□□□ -0.34
ZNF548-211ENST00000600927 SERTAD1Q9UHV2 236 aa12.93□□□□□ -0.34
ZNF548-211ENST00000600927 DDX41Q9UJV9 622 aaKnown RBP12.93□□□□□ -0.34
ZNF548-211ENST00000600927 ATP11BQ9Y2G3 1177 aa12.93□□□□□ -0.34
ZNF548-211ENST00000600927 A0A1W2PPC1 479 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 ARVCFO00192 962 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 STAM2O75886 525 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 TXNP10599 105 aaKnown RBP12.92□□□□□ -0.34
ZNF548-211ENST00000600927 HOXD8P13378 290 aaPredicted RBP12.92□□□□□ -0.34
ZNF548-211ENST00000600927 MAGEA10P43363 369 aaPredicted RBP12.92□□□□□ -0.34
ZNF548-211ENST00000600927 CPT1AP50416 773 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 PURAQ00577 322 aaKnown RBP12.92□□□□□ -0.34
ZNF548-211ENST00000600927 TLE2Q04725 743 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 HABP4Q5JVS0 413 aaKnown RBP12.92□□□□□ -0.34
ZNF548-211ENST00000600927 SPECC1Q5M775 1068 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 CXCL17Q6UXB2 119 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 USP49Q70CQ1 688 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 FCHSD1Q86WN1 690 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 MLKLQ8NB16 471 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 OR6J1Q8NGC5 347 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 PDLIM2Q96JY6 352 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 LRRC27Q9C0I9 530 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 KCNMB3Q9NPA1 279 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 DISC1Q9NRI5 854 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 PCDH10Q9P2E7 1040 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 DACH1Q9UI36 760 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 PCDHA5Q9Y5H7 936 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 SCN10AQ9Y5Y9 1956 aa12.92□□□□□ -0.34
ZNF548-211ENST00000600927 MROH7Q68CQ1 1323 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 TRIM43BA6NCK2 446 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 SMTNL1A8MU46 457 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 IKBKBO14920 756 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 KIAA0355O15063 1070 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 ZEB2O60315 1214 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 CCND2P30279 289 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 ICAM3P32942 547 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 AMPD3Q01432 767 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 FAAP100Q0VG06 881 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 IQCB1Q15051 598 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 LY6KQ17RY6 165 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 HYIQ5T013 277 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 RRAGBQ5VZM2 374 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 PCNX4Q63HM2 1172 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 XRRA1Q6P2D8 792 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 SEPT14Q6ZU15 432 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 NIPA1Q7RTP0 329 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 FAM126BQ8IXS8 530 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 SMARCE1Q969G3 411 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 TRIM43Q96BQ3 446 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-211ENST00000600927 CALML4Q96GE6 196 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 PAGE5Q96GU1 130 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 SEZ6LQ9BYH1 1024 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 STK17AQ9UEE5 414 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 TBX21Q9UL17 535 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 PCDHA12Q9UN75 941 aa12.91□□□□□ -0.34
ZNF548-211ENST00000600927 SZT2Q5T011 3432 aa12.9□□□□□ -0.34
ZNF548-211ENST00000600927 GTPBP6O43824 516 aaPredicted RBP12.9□□□□□ -0.34
ZNF548-211ENST00000600927 PQBP1O60828 265 aaKnown RBP12.9□□□□□ -0.34
ZNF548-211ENST00000600927 TDP2O95551 362 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms