RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 TRIM50Q86XT4 487 aa25.72■■□□□ 1.71
IRF3-227ENST00000600911 TPH2Q8IWU9 490 aa25.72■■□□□ 1.71
IRF3-227ENST00000600911 GRAMD1CQ8IYS0 662 aa25.72■■□□□ 1.71
IRF3-227ENST00000600911 SLAIN1Q8ND83 568 aa25.72■■□□□ 1.71
IRF3-227ENST00000600911 OR6J1Q8NGC5 347 aa25.72■■□□□ 1.71
IRF3-227ENST00000600911 MTRQ99707 1265 aa25.72■■□□□ 1.71
IRF3-227ENST00000600911 DDX19AQ9NUU7 478 aaKnown RBP25.72■■□□□ 1.71
IRF3-227ENST00000600911 GABBR1Q9UBS5 961 aa25.72■■□□□ 1.71
IRF3-227ENST00000600911 NRBP1Q9UHY1 535 aa25.72■■□□□ 1.71
IRF3-227ENST00000600911 KIAA1024Q9UPX6 916 aa25.72■■□□□ 1.71
IRF3-227ENST00000600911 PCDHA10Q9Y5I2 948 aa25.72■■□□□ 1.71
IRF3-227ENST00000600911 ARID2Q68CP9 1835 aa25.72■■□□□ 1.71
IRF3-227ENST00000600911 IGKV6D-21A0A0A0MT36 114 aa25.71■■□□□ 1.71
IRF3-227ENST00000600911 MYADML2A6NDP7 307 aa25.71■■□□□ 1.71
IRF3-227ENST00000600911 CTAGE5O15320 804 aa25.71■■□□□ 1.71
IRF3-227ENST00000600911 AKR1A1P14550 325 aa25.71■■□□□ 1.71
IRF3-227ENST00000600911 ATP4AP20648 1035 aa25.71■■□□□ 1.71
IRF3-227ENST00000600911 TCF7P36402 384 aaPredicted RBP25.71■■□□□ 1.71
IRF3-227ENST00000600911 SWSAP1Q6NVH7 229 aa25.71■■□□□ 1.71
IRF3-227ENST00000600911 TLK2Q86UE8 772 aa25.71■■□□□ 1.71
IRF3-227ENST00000600911 SMAP1Q8IYB5 467 aaPredicted RBP25.71■■□□□ 1.71
IRF3-227ENST00000600911 STAMQ92783 540 aa25.71■■□□□ 1.71
IRF3-227ENST00000600911 EMID1Q96A84 441 aaPredicted RBP25.71■■□□□ 1.71
IRF3-227ENST00000600911 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.7■■□□□ 1.71
IRF3-227ENST00000600911 SFNP31947 248 aa25.7■■□□□ 1.71
IRF3-227ENST00000600911 CTCFP49711 727 aaPredicted RBP25.7■■□□□ 1.71
IRF3-227ENST00000600911 KLHL40Q2TBA0 621 aa25.7■■□□□ 1.71
IRF3-227ENST00000600911 SEPT4O43236 478 aa25.7■■□□□ 1.7
IRF3-227ENST00000600911 STBD1O95210 358 aa25.7■■□□□ 1.7
IRF3-227ENST00000600911 MBD3O95983 291 aa25.7■■□□□ 1.7
IRF3-227ENST00000600911 CASP1P29466 404 aa25.7■■□□□ 1.7
IRF3-227ENST00000600911 LAMC2Q13753 1193 aa25.7■■□□□ 1.7
IRF3-227ENST00000600911 HAUS3Q68CZ6 603 aa25.7■■□□□ 1.7
IRF3-227ENST00000600911 TRMT1LQ7Z2T5 733 aaKnown RBP25.7■■□□□ 1.7
IRF3-227ENST00000600911 ERMNQ8TAM6 284 aa25.7■■□□□ 1.7
IRF3-227ENST00000600911 PIGOQ8TEQ8 1089 aa25.7■■□□□ 1.7
IRF3-227ENST00000600911 SEPT1Q8WYJ6 367 aa25.7■■□□□ 1.7
IRF3-227ENST00000600911 ERCC4Q92889 916 aaPredicted RBP25.7■■□□□ 1.7
IRF3-227ENST00000600911 TUFT1Q9NNX1 390 aa25.7■■□□□ 1.7
IRF3-227ENST00000600911 IGSF9BQ9UPX0 1349 aa25.69■■□□□ 1.7
IRF3-227ENST00000600911 P4HBP07237 508 aaKnown RBP25.69■■□□□ 1.7
IRF3-227ENST00000600911 TXLNAP40222 546 aa25.69■■□□□ 1.7
IRF3-227ENST00000600911 BEX3Q00994 111 aa25.69■■□□□ 1.7
IRF3-227ENST00000600911 UTP14CQ5TAP6 766 aaKnown RBP25.69■■□□□ 1.7
IRF3-227ENST00000600911 RRAGBQ5VZM2 374 aa25.69■■□□□ 1.7
IRF3-227ENST00000600911 KRBA2Q6ZNG9 492 aa25.69■■□□□ 1.7
IRF3-227ENST00000600911 RDM1Q8NG50 284 aa25.69■■□□□ 1.7
IRF3-227ENST00000600911 RASSF8Q8NHQ8 419 aa25.69■■□□□ 1.7
IRF3-227ENST00000600911 CALML4Q96GE6 196 aa25.69■■□□□ 1.7
IRF3-227ENST00000600911 SH2D3AQ9BRG2 576 aa25.69■■□□□ 1.7
IRF3-227ENST00000600911 NKRFO15226 690 aaKnown RBP eCLIP25.68■■□□□ 1.7
IRF3-227ENST00000600911 PSAPP07602 524 aa25.68■■□□□ 1.7
IRF3-227ENST00000600911 MMP3P08254 477 aa25.68■■□□□ 1.7
IRF3-227ENST00000600911 PRR29P0C7W0 189 aa25.68■■□□□ 1.7
IRF3-227ENST00000600911 STAT6P42226 847 aa25.68■■□□□ 1.7
IRF3-227ENST00000600911 CAMK4Q16566 473 aa25.68■■□□□ 1.7
IRF3-227ENST00000600911 CAVIN1Q6NZI2 390 aaKnown RBP25.68■■□□□ 1.7
IRF3-227ENST00000600911 MIS18BP1Q6P0N0 1132 aa25.68■■□□□ 1.7
IRF3-227ENST00000600911 PPTC7Q8NI37 304 aa25.68■■□□□ 1.7
IRF3-227ENST00000600911 TCEAL9Q9UHQ7 104 aa25.68■■□□□ 1.7
IRF3-227ENST00000600911 NOP56O00567 594 aaKnown RBP25.67■■□□□ 1.7
IRF3-227ENST00000600911 QARSP47897 775 aaKnown RBP25.67■■□□□ 1.7
IRF3-227ENST00000600911 MCM6Q14566 821 aa25.67■■□□□ 1.7
IRF3-227ENST00000600911 CTU1Q7Z7A3 348 aaKnown RBP25.67■■□□□ 1.7
IRF3-227ENST00000600911 CCDC39Q9UFE4 941 aa25.67■■□□□ 1.7
IRF3-227ENST00000600911 SYNRGQ9UMZ2 1314 aa25.67■■□□□ 1.7
IRF3-227ENST00000600911 KDM3AQ9Y4C1 1321 aa25.67■■□□□ 1.7
IRF3-227ENST00000600911 LGR5O75473 907 aa25.66■■□□□ 1.7
IRF3-227ENST00000600911 PGK1P00558 417 aa25.66■■□□□ 1.7
IRF3-227ENST00000600911 MYCP01106 439 aaPredicted RBP25.66■■□□□ 1.7
IRF3-227ENST00000600911 ZNF286BP0CG31 522 aa25.66■■□□□ 1.7
IRF3-227ENST00000600911 PTMSP20962 102 aa25.66■■□□□ 1.7
IRF3-227ENST00000600911 MTFR1Q15390 333 aa25.66■■□□□ 1.7
IRF3-227ENST00000600911 RAD54LQ92698 747 aa25.66■■□□□ 1.7
IRF3-227ENST00000600911 CDK5RAP3Q96JB5 506 aa25.66■■□□□ 1.7
IRF3-227ENST00000600911 ZNF302Q9NR11 478 aa25.66■■□□□ 1.7
IRF3-227ENST00000600911 MAFBQ9Y5Q3 323 aaPredicted RBP25.66■■□□□ 1.7
IRF3-227ENST00000600911 BACH1O14867 736 aa25.66■■□□□ 1.7
IRF3-227ENST00000600911 DUSP11O75319 330 aaKnown RBP25.66■■□□□ 1.7
IRF3-227ENST00000600911 HOXD8P13378 290 aaPredicted RBP25.66■■□□□ 1.7
IRF3-227ENST00000600911 PSMC5P62195 406 aa25.66■■□□□ 1.7
IRF3-227ENST00000600911 DHX8Q14562 1220 aaKnown RBP25.66■■□□□ 1.7
IRF3-227ENST00000600911 SH3RF1Q7Z6J0 888 aa25.66■■□□□ 1.7
IRF3-227ENST00000600911 NEK9Q8TD19 979 aa25.66■■□□□ 1.7
IRF3-227ENST00000600911 CLSTN2Q9H4D0 955 aa25.66■■□□□ 1.7
IRF3-227ENST00000600911 LOXHD1Q8IVV2 1947 aa25.66■■□□□ 1.7
IRF3-227ENST00000600911 A6NJR5 290 aa25.65■■□□□ 1.7
IRF3-227ENST00000600911 LGALS2P05162 132 aa25.65■■□□□ 1.7
IRF3-227ENST00000600911 SLFN14P0C7P3 912 aa25.65■■□□□ 1.7
IRF3-227ENST00000600911 IQUBQ8NA54 791 aa25.65■■□□□ 1.7
IRF3-227ENST00000600911 PPP1R13LQ8WUF5 828 aa25.65■■□□□ 1.7
IRF3-227ENST00000600911 PAGE5Q96GU1 130 aa25.65■■□□□ 1.7
IRF3-227ENST00000600911 UNC93B1Q9H1C4 597 aa25.65■■□□□ 1.7
IRF3-227ENST00000600911 ZSWIM4Q9H7M6 989 aa25.65■■□□□ 1.7
IRF3-227ENST00000600911 ADAMTS4O75173 837 aa25.64■■□□□ 1.7
IRF3-227ENST00000600911 MARK3P27448 753 aa25.64■■□□□ 1.7
IRF3-227ENST00000600911 AFMP43652 599 aa25.64■■□□□ 1.7
IRF3-227ENST00000600911 MDM2Q00987 491 aaPredicted RBP25.64■■□□□ 1.7
IRF3-227ENST00000600911 PRKCEQ02156 737 aa25.64■■□□□ 1.7
IRF3-227ENST00000600911 PLA2G4FQ68DD2 849 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms