RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 SMIM10L2AP0DMW4 78 aa16.46■□□□□ 0.23
LTBP4-228ENST00000600499 SMIM10L2BP0DMW5 78 aa16.46■□□□□ 0.23
LTBP4-228ENST00000600499 PRPHP41219 470 aa16.46■□□□□ 0.23
LTBP4-228ENST00000600499 PLCB4Q15147 1175 aa16.46■□□□□ 0.23
LTBP4-228ENST00000600499 EPHA7Q15375 998 aa16.46■□□□□ 0.23
LTBP4-228ENST00000600499 SWSAP1Q6NVH7 229 aa16.46■□□□□ 0.23
LTBP4-228ENST00000600499 MIER3Q7Z3K6 550 aa16.46■□□□□ 0.23
LTBP4-228ENST00000600499 C7orf31Q8N865 590 aa16.46■□□□□ 0.23
LTBP4-228ENST00000600499 GLG1Q92896 1179 aa16.46■□□□□ 0.23
LTBP4-228ENST00000600499 TNPO1Q92973 898 aaKnown RBP16.46■□□□□ 0.23
LTBP4-228ENST00000600499 ZNF302Q9NR11 478 aa16.46■□□□□ 0.23
LTBP4-228ENST00000600499 MORC2Q9Y6X9 1032 aaPredicted RBP16.46■□□□□ 0.23
LTBP4-228ENST00000600499 MYH9P35579 1960 aaKnown RBP16.46■□□□□ 0.22
LTBP4-228ENST00000600499 NRCAMQ92823 1304 aa16.45■□□□□ 0.22
LTBP4-228ENST00000600499 PQBP1O60828 265 aaKnown RBP16.45■□□□□ 0.22
LTBP4-228ENST00000600499 OR52Z1P0C646 297 aa16.45■□□□□ 0.22
LTBP4-228ENST00000600499 ATP2B1P20020 1258 aa16.45■□□□□ 0.22
LTBP4-228ENST00000600499 ATP2C1P98194 919 aaPredicted RBP16.45■□□□□ 0.22
LTBP4-228ENST00000600499 RBL2Q08999 1139 aa16.45■□□□□ 0.22
LTBP4-228ENST00000600499 HIC1Q14526 733 aa16.45■□□□□ 0.22
LTBP4-228ENST00000600499 NBR1Q14596 966 aa16.45■□□□□ 0.22
LTBP4-228ENST00000600499 GDF6Q6KF10 455 aaPredicted RBP16.45■□□□□ 0.22
LTBP4-228ENST00000600499 C7orf61Q8IZ16 206 aa16.45■□□□□ 0.22
LTBP4-228ENST00000600499 ATP8B4Q8TF62 1192 aa16.45■□□□□ 0.22
LTBP4-228ENST00000600499 TRPV6Q9H1D0 765 aa16.45■□□□□ 0.22
LTBP4-228ENST00000600499 TTC12Q9H892 705 aaPredicted RBP16.45■□□□□ 0.22
LTBP4-228ENST00000600499 MBLAC1A4D2B0 266 aaPredicted RBP16.44■□□□□ 0.22
LTBP4-228ENST00000600499 TRIM43BA6NCK2 446 aa16.44■□□□□ 0.22
LTBP4-228ENST00000600499 RRN3P2A6NIE6 340 aa16.44■□□□□ 0.22
LTBP4-228ENST00000600499 ZNF862O60290 1169 aa16.44■□□□□ 0.22
LTBP4-228ENST00000600499 MARCH6O60337 910 aa16.44■□□□□ 0.22
LTBP4-228ENST00000600499 HBP1O60381 514 aa16.44■□□□□ 0.22
LTBP4-228ENST00000600499 STBD1O95210 358 aa16.44■□□□□ 0.22
LTBP4-228ENST00000600499 GNAT1P11488 350 aa16.44■□□□□ 0.22
LTBP4-228ENST00000600499 FXR2P51116 673 aaKnown RBP eCLIP16.44■□□□□ 0.228e-9■■■□□ 17.4
LTBP4-228ENST00000600499 PTGDRQ13258 359 aa16.44■□□□□ 0.22
LTBP4-228ENST00000600499 PDIA5Q14554 519 aa16.44■□□□□ 0.22
LTBP4-228ENST00000600499 ARL6IP4Q66PJ3 421 aaKnown RBP16.44■□□□□ 0.22
LTBP4-228ENST00000600499 SH3RF1Q7Z6J0 888 aa16.44■□□□□ 0.22
LTBP4-228ENST00000600499 FERMT3Q86UX7 667 aa16.44■□□□□ 0.22
LTBP4-228ENST00000600499 BBXQ8WY36 941 aaPredicted RBP16.44■□□□□ 0.22
LTBP4-228ENST00000600499 TRIM43Q96BQ3 446 aaPredicted RBP16.44■□□□□ 0.22
LTBP4-228ENST00000600499 HSD17B14Q9BPX1 270 aa16.44■□□□□ 0.22
LTBP4-228ENST00000600499 TRMT13Q9NUP7 481 aaKnown RBP16.44■□□□□ 0.22
LTBP4-228ENST00000600499 GABBR1Q9UBS5 961 aa16.44■□□□□ 0.22
LTBP4-228ENST00000600499 KAT6AQ92794 2004 aa16.44■□□□□ 0.22
LTBP4-228ENST00000600499 COL1A2P08123 1366 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 POTEB3A0JP26 581 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 C17orf102A2RUQ5 167 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 BACH1O14867 736 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 BMP15O95972 392 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 P4HBP07237 508 aaKnown RBP16.43■□□□□ 0.22
LTBP4-228ENST00000600499 TXKP42681 527 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 PTK7Q13308 1070 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 PTGISQ16647 500 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 FAM47CQ5HY64 1035 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 MARCH8Q5T0T0 291 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 PDXDC2PQ6P474 469 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 POTEBQ6S5H4 581 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 RPAINQ86UA6 219 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 SERINC5Q86VE9 423 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 IGSF22Q8N9C0 903 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 LMBR1Q8WVP7 490 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 ATP6V0A1Q93050 837 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 FAM167AQ96KS9 214 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 NOC4LQ9BVI4 516 aaKnown RBP16.43■□□□□ 0.22
LTBP4-228ENST00000600499 TMEM39AQ9NV64 488 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 SAMM50Q9Y512 469 aa16.43■□□□□ 0.22
LTBP4-228ENST00000600499 TRIP12Q14669 1992 aaPredicted RBP16.43■□□□□ 0.22
LTBP4-228ENST00000600499 CEP290O15078 2479 aa16.42■□□□□ 0.22
LTBP4-228ENST00000600499 ZBTB42B2RXF5 422 aa16.42■□□□□ 0.22
LTBP4-228ENST00000600499 PITPNM1O00562 1244 aa16.42■□□□□ 0.22
LTBP4-228ENST00000600499 CHMP2AO43633 222 aa16.42■□□□□ 0.22
LTBP4-228ENST00000600499 DKC1O60832 514 aaKnown RBP eCLIP16.42■□□□□ 0.22
LTBP4-228ENST00000600499 LYPLA2O95372 231 aa16.42■□□□□ 0.22
LTBP4-228ENST00000600499 TIMP1P01033 207 aa16.42■□□□□ 0.22
LTBP4-228ENST00000600499 ZSCAN22P10073 491 aaPredicted RBP16.42■□□□□ 0.22
LTBP4-228ENST00000600499 INSRRP14616 1297 aa16.42■□□□□ 0.22
LTBP4-228ENST00000600499 PSMC5P62195 406 aa16.42■□□□□ 0.22
LTBP4-228ENST00000600499 UGCGQ16739 394 aa16.42■□□□□ 0.22
LTBP4-228ENST00000600499 TRIM71Q2Q1W2 868 aaKnown RBP16.42■□□□□ 0.22
LTBP4-228ENST00000600499 ZNF484Q5JVG2 852 aa16.42■□□□□ 0.22
LTBP4-228ENST00000600499 C4orf19Q8IY42 314 aa16.42■□□□□ 0.22
LTBP4-228ENST00000600499 NEK9Q8TD19 979 aa16.42■□□□□ 0.22
LTBP4-228ENST00000600499 PPP1R13LQ8WUF5 828 aa16.42■□□□□ 0.22
LTBP4-228ENST00000600499 NIFKQ9BYG3 293 aaKnown RBP16.42■□□□□ 0.22
LTBP4-228ENST00000600499 SETD4Q9NVD3 440 aa16.42■□□□□ 0.22
LTBP4-228ENST00000600499 LTBP2Q14767 1821 aa16.42■□□□□ 0.22
LTBP4-228ENST00000600499 H0YGN5 161 aa16.41■□□□□ 0.22
LTBP4-228ENST00000600499 SLITRK3O94933 977 aa16.41■□□□□ 0.22
LTBP4-228ENST00000600499 BRD1O95696 1058 aa16.41■□□□□ 0.22
LTBP4-228ENST00000600499 MUTP22033 750 aa16.41■□□□□ 0.22
LTBP4-228ENST00000600499 ITGB8P26012 769 aa16.41■□□□□ 0.22
LTBP4-228ENST00000600499 MARK3P27448 753 aa16.41■□□□□ 0.22
LTBP4-228ENST00000600499 DDIT3P35638 169 aa16.41■□□□□ 0.22
LTBP4-228ENST00000600499 QARSP47897 775 aaKnown RBP16.41■□□□□ 0.22
LTBP4-228ENST00000600499 ZNF200P98182 395 aaPredicted RBP16.41■□□□□ 0.22
LTBP4-228ENST00000600499 PPFIA1Q13136 1202 aa16.41■□□□□ 0.22
LTBP4-228ENST00000600499 PTPAQ15257 358 aa16.41■□□□□ 0.22
LTBP4-228ENST00000600499 TARBP2Q15633 366 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms