RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 GTF2IRD1Q9UHL9 959 aa15.5■□□□□ 0.07
VRK3-219ENST00000600137 TBX21Q9UL17 535 aa15.5■□□□□ 0.07
VRK3-219ENST00000600137 PCDHA12Q9UN75 941 aa15.5■□□□□ 0.07
VRK3-219ENST00000600137 ATP11BQ9Y2G3 1177 aa15.5■□□□□ 0.07
VRK3-219ENST00000600137 TRIM43BA6NCK2 446 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 CHMP2AO43633 222 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 PQBP1O60828 265 aaKnown RBP15.49■□□□□ 0.07
VRK3-219ENST00000600137 BAG4O95429 457 aaKnown RBP15.49■□□□□ 0.07
VRK3-219ENST00000600137 PSAPP07602 524 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 OR52Z1P0C646 297 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 SMIM10L2AP0DMW4 78 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 SMIM10L2BP0DMW5 78 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 ITGB8P26012 769 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 SFNP31947 248 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 JAK3P52333 1124 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 MIS18BP1Q6P0N0 1132 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 MIER3Q7Z3K6 550 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 DPF3Q92784 378 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 GLG1Q92896 1179 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 TRIM43Q96BQ3 446 aaPredicted RBP15.49■□□□□ 0.07
VRK3-219ENST00000600137 HSD17B14Q9BPX1 270 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 ZSCAN16Q9H4T2 348 aaPredicted RBP15.49■□□□□ 0.07
VRK3-219ENST00000600137 ZNF302Q9NR11 478 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 PDLIM7Q9NR12 457 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 ERAP1Q9NZ08 941 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 WRAP73Q9P2S5 460 aaPredicted RBP15.49■□□□□ 0.07
VRK3-219ENST00000600137 GABBR1Q9UBS5 961 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 KAT6AQ92794 2004 aa15.49■□□□□ 0.07
VRK3-219ENST00000600137 IGSF9BQ9UPX0 1349 aa15.48■□□□□ 0.07
VRK3-219ENST00000600137 ZBTB42B2RXF5 422 aa15.48■□□□□ 0.07
VRK3-219ENST00000600137 EVI5O60447 810 aa15.48■□□□□ 0.07
VRK3-219ENST00000600137 BRD1O95696 1058 aa15.48■□□□□ 0.07
VRK3-219ENST00000600137 ZSCAN22P10073 491 aaPredicted RBP15.48■□□□□ 0.07
VRK3-219ENST00000600137 PDIA4P13667 645 aaKnown RBP15.48■□□□□ 0.07
VRK3-219ENST00000600137 MARK3P27448 753 aa15.48■□□□□ 0.07
VRK3-219ENST00000600137 ATP2C1P98194 919 aaPredicted RBP15.48■□□□□ 0.07
VRK3-219ENST00000600137 PTPAQ15257 358 aa15.48■□□□□ 0.07
VRK3-219ENST00000600137 EPHA7Q15375 998 aa15.48■□□□□ 0.07
VRK3-219ENST00000600137 MARCH8Q5T0T0 291 aa15.48■□□□□ 0.07
VRK3-219ENST00000600137 C7orf61Q8IZ16 206 aa15.48■□□□□ 0.07
VRK3-219ENST00000600137 FTOQ9C0B1 505 aaKnown RBP eCLIP15.48■□□□□ 0.07
VRK3-219ENST00000600137 SETD4Q9NVD3 440 aa15.48■□□□□ 0.07
VRK3-219ENST00000600137 MROH7Q68CQ1 1323 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 MYH15Q9Y2K3 1946 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 DCDC2CA8MYV0 355 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 KIAA0355O15063 1070 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 SLITRK3O94933 977 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 F13A1P00488 732 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 INSRRP14616 1297 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 PRPHP41219 470 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 TECP42680 631 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 SLC26A2P50443 739 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 FXR2P51116 673 aaKnown RBP eCLIP15.47■□□□□ 0.07
VRK3-219ENST00000600137 CHMP4BP1P59074 171 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 PDXDC2PQ6P474 469 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 IGSF22Q8N9C0 903 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 ATP8B4Q8TF62 1192 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 DHX38Q92620 1227 aaKnown RBP15.47■□□□□ 0.07
VRK3-219ENST00000600137 WNT8BQ93098 351 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 CEP89Q96ST8 783 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 AZI2Q9H6S1 392 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 RGL1Q9NZL6 768 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 ZNF215Q9UL58 517 aaPredicted RBP15.47■□□□□ 0.07
VRK3-219ENST00000600137 CLIC4Q9Y696 253 aa15.47■□□□□ 0.07
VRK3-219ENST00000600137 POTEMA6NI47 508 aa15.46■□□□□ 0.07
VRK3-219ENST00000600137 LAD1O00515 517 aa15.46■□□□□ 0.07
VRK3-219ENST00000600137 BACH1O14867 736 aa15.46■□□□□ 0.07
VRK3-219ENST00000600137 TREHO43280 583 aa15.46■□□□□ 0.07
VRK3-219ENST00000600137 MARCH6O60337 910 aa15.46■□□□□ 0.07
VRK3-219ENST00000600137 CLTBP09497 229 aa15.46■□□□□ 0.07
VRK3-219ENST00000600137 SPATA31C1P0DKV0 1188 aa15.46■□□□□ 0.07
VRK3-219ENST00000600137 CYP2C9P11712 490 aa15.46■□□□□ 0.07
VRK3-219ENST00000600137 PDIA5Q14554 519 aa15.46■□□□□ 0.07
VRK3-219ENST00000600137 SF3A1Q15459 793 aaKnown RBP15.46■□□□□ 0.07
VRK3-219ENST00000600137 TRIM71Q2Q1W2 868 aaKnown RBP15.46■□□□□ 0.07
VRK3-219ENST00000600137 FAM47CQ5HY64 1035 aa15.46■□□□□ 0.07
VRK3-219ENST00000600137 FOXD4L5Q5VV16 416 aaPredicted RBP15.46■□□□□ 0.07
VRK3-219ENST00000600137 FAM160B1Q5W0V3 765 aa15.46■□□□□ 0.07
VRK3-219ENST00000600137 NCAPH2Q6IBW4 605 aa15.46■□□□□ 0.07
VRK3-219ENST00000600137 C7orf31Q8N865 590 aa15.46■□□□□ 0.07
VRK3-219ENST00000600137 LMBR1Q8WVP7 490 aa15.46■□□□□ 0.07
VRK3-219ENST00000600137 FOXD4L4Q8WXT5 416 aaPredicted RBP15.46■□□□□ 0.07
VRK3-219ENST00000600137 USP28Q96RU2 1077 aa15.46■□□□□ 0.07
VRK3-219ENST00000600137 TSHZ2Q9NRE2 1034 aa15.46■□□□□ 0.07
VRK3-219ENST00000600137 SAMM50Q9Y512 469 aa15.46■□□□□ 0.07
VRK3-219ENST00000600137 NRCAMQ92823 1304 aa15.45■□□□□ 0.06
VRK3-219ENST00000600137 POTEB3A0JP26 581 aa15.45■□□□□ 0.06
VRK3-219ENST00000600137 MBLAC1A4D2B0 266 aaPredicted RBP15.45■□□□□ 0.06
VRK3-219ENST00000600137 RBAK-RBAKDNI3L0D1 243 aa15.45■□□□□ 0.06
VRK3-219ENST00000600137 HBP1O60381 514 aa15.45■□□□□ 0.06
VRK3-219ENST00000600137 P4HBP07237 508 aaKnown RBP15.45■□□□□ 0.06
VRK3-219ENST00000600137 TARBP2Q15633 366 aaKnown RBP15.45■□□□□ 0.06
VRK3-219ENST00000600137 GRIK4Q16099 956 aa15.45■□□□□ 0.06
VRK3-219ENST00000600137 PTGISQ16647 500 aa15.45■□□□□ 0.06
VRK3-219ENST00000600137 POTEBQ6S5H4 581 aa15.45■□□□□ 0.06
VRK3-219ENST00000600137 SERINC5Q86VE9 423 aa15.45■□□□□ 0.06
VRK3-219ENST00000600137 BANK1Q8NDB2 785 aa15.45■□□□□ 0.06
VRK3-219ENST00000600137 TRAPPC12Q8WVT3 735 aa15.45■□□□□ 0.06
VRK3-219ENST00000600137 VWCEQ96DN2 955 aa15.45■□□□□ 0.06
VRK3-219ENST00000600137 ZBTB10Q96DT7 871 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms